Protein–RNA interactions for Protein: O35704

Sptlc1, Serine palmitoyltransferase 1, mousemouse

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sptlc1O35704 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC17.75■□□□□ 0.43
Sptlc1O35704 Cope-201ENSMUST00000066469 1300 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Sptlc1O35704 Rnf128-201ENSMUST00000113026 2750 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Sptlc1O35704 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Sptlc1O35704 Dtx2-201ENSMUST00000005072 2562 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
Sptlc1O35704 Tmem254c-202ENSMUST00000100819 1211 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Sptlc1O35704 Gm4459-201ENSMUST00000118750 468 ntBASIC17.75■□□□□ 0.43
Sptlc1O35704 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Sptlc1O35704 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC17.75■□□□□ 0.43
Sptlc1O35704 Timm23-206ENSMUST00000170331 777 ntTSL 3 BASIC17.75■□□□□ 0.43
Sptlc1O35704 Gm7230-201ENSMUST00000173026 815 ntBASIC17.75■□□□□ 0.43
Sptlc1O35704 Gm27217-201ENSMUST00000183438 882 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
Sptlc1O35704 Gm37584-201ENSMUST00000193595 1290 ntBASIC17.75■□□□□ 0.43
Sptlc1O35704 Gm45144-201ENSMUST00000207473 354 ntTSL 5 BASIC17.75■□□□□ 0.43
Sptlc1O35704 1300002E11Rik-207ENSMUST00000211443 767 ntTSL 5 BASIC17.75■□□□□ 0.43
Sptlc1O35704 Gm40513-201ENSMUST00000217258 411 ntTSL 3 BASIC17.75■□□□□ 0.43
Sptlc1O35704 Cacfd1-205ENSMUST00000114007 2689 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
Sptlc1O35704 Evx2-201ENSMUST00000001867 4191 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
Sptlc1O35704 Gm19439-201ENSMUST00000198195 2273 ntBASIC17.75■□□□□ 0.43
Sptlc1O35704 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Sptlc1O35704 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Sptlc1O35704 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC17.74■□□□□ 0.43
Sptlc1O35704 Fmr1-201ENSMUST00000088546 4409 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Sptlc1O35704 Dhx30-224ENSMUST00000200066 4623 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Sptlc1O35704 Igsf11-201ENSMUST00000023478 3443 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Sptlc1O35704 Atxn7-201ENSMUST00000022257 6853 ntAPPRIS P2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Sptlc1O35704 Gm11841-201ENSMUST00000117060 1963 ntBASIC17.74■□□□□ 0.43
Sptlc1O35704 Cyp11b2-201ENSMUST00000167634 1625 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Sptlc1O35704 Gm12480-201ENSMUST00000129576 774 ntTSL 3 BASIC17.74■□□□□ 0.43
Sptlc1O35704 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Sptlc1O35704 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Sptlc1O35704 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC17.74■□□□□ 0.43
Sptlc1O35704 Il3ra-205ENSMUST00000224877 1128 ntAPPRIS ALT2 BASIC17.74■□□□□ 0.43
Sptlc1O35704 Sumo1-201ENSMUST00000091374 1215 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Sptlc1O35704 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC17.74■□□□□ 0.43
Sptlc1O35704 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
Sptlc1O35704 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
Sptlc1O35704 Gmcl1-201ENSMUST00000001185 2949 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
Sptlc1O35704 Rgs6-206ENSMUST00000186309 1693 ntAPPRIS P4 TSL 5 BASIC17.74■□□□□ 0.43
Sptlc1O35704 B020017C02Rik-201ENSMUST00000197444 1688 ntBASIC17.74■□□□□ 0.43
Sptlc1O35704 Sh3yl1-201ENSMUST00000020997 1750 ntAPPRIS P3 TSL 1 (best) BASIC17.74■□□□□ 0.43
Sptlc1O35704 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Sptlc1O35704 Zranb2-203ENSMUST00000106058 2924 ntAPPRIS P2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Sptlc1O35704 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Sptlc1O35704 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Sptlc1O35704 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC17.73■□□□□ 0.43
Sptlc1O35704 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC17.73■□□□□ 0.43
Sptlc1O35704 Gm12497-201ENSMUST00000138778 237 ntBASIC17.73■□□□□ 0.43
Sptlc1O35704 Tsc22d1-208ENSMUST00000142683 797 ntTSL 3 BASIC17.73■□□□□ 0.43
Sptlc1O35704 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Sptlc1O35704 Gm20614-201ENSMUST00000177106 632 ntBASIC17.73■□□□□ 0.43
Sptlc1O35704 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC17.73■□□□□ 0.43
Sptlc1O35704 Tamm41-201ENSMUST00000032461 1168 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Sptlc1O35704 Lce1l-201ENSMUST00000054426 670 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Sptlc1O35704 Gm43702-201ENSMUST00000198772 2546 ntBASIC17.73■□□□□ 0.43
Sptlc1O35704 Polr3e-203ENSMUST00000207481 2545 ntAPPRIS ALT2 TSL 1 (best) BASIC17.73■□□□□ 0.43
Sptlc1O35704 Lins1-203ENSMUST00000121777 2729 ntAPPRIS P3 TSL 2 BASIC17.73■□□□□ 0.43
Sptlc1O35704 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC17.73■□□□□ 0.43
Sptlc1O35704 Coq6-202ENSMUST00000110276 1776 ntAPPRIS P2 TSL 5 BASIC17.73■□□□□ 0.43
Sptlc1O35704 Myb-201ENSMUST00000020158 3074 ntAPPRIS P3 TSL 1 (best) BASIC17.73■□□□□ 0.43
Sptlc1O35704 Phkg2-202ENSMUST00000121004 1840 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Sptlc1O35704 Agk-201ENSMUST00000031977 2531 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Sptlc1O35704 Mtmr3-202ENSMUST00000109943 5674 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Sptlc1O35704 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Sptlc1O35704 Col27a1-201ENSMUST00000036300 7612 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Sptlc1O35704 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC17.72■□□□□ 0.43
Sptlc1O35704 AC154527.4-201ENSMUST00000224364 1667 ntBASIC17.72■□□□□ 0.43
Sptlc1O35704 Gm8097-201ENSMUST00000117903 829 ntBASIC17.72■□□□□ 0.43
Sptlc1O35704 Gm11780-201ENSMUST00000136880 516 ntBASIC17.72■□□□□ 0.43
Sptlc1O35704 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC17.72■□□□□ 0.43
Sptlc1O35704 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC17.72■□□□□ 0.43
Sptlc1O35704 Tdrkh-208ENSMUST00000200486 1231 ntTSL 3 BASIC17.72■□□□□ 0.43
Sptlc1O35704 AC132104.2-201ENSMUST00000215011 266 ntBASIC17.72■□□□□ 0.43
Sptlc1O35704 Gm5364-201ENSMUST00000216789 889 ntBASIC17.72■□□□□ 0.43
Sptlc1O35704 D17Wsu92e-203ENSMUST00000114863 3828 ntAPPRIS P3 TSL 1 (best) BASIC17.72■□□□□ 0.43
Sptlc1O35704 Hoxd4-201ENSMUST00000047904 2560 ntAPPRIS P1 TSL 5 BASIC17.72■□□□□ 0.43
Sptlc1O35704 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Sptlc1O35704 Gm9821-201ENSMUST00000178895 1953 ntAPPRIS P1 BASIC17.71■□□□□ 0.43
Sptlc1O35704 Hspa5-202ENSMUST00000100171 2613 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Sptlc1O35704 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC17.71■□□□□ 0.43
Sptlc1O35704 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC17.71■□□□□ 0.43
Sptlc1O35704 Ecel1-201ENSMUST00000027463 2695 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Sptlc1O35704 Camsap3-206ENSMUST00000207533 2584 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Sptlc1O35704 Cdv3-207ENSMUST00000190226 3107 ntTSL 5 BASIC17.71■□□□□ 0.43
Sptlc1O35704 Gpr161-202ENSMUST00000178700 1827 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Sptlc1O35704 Gm15173-201ENSMUST00000122049 433 ntBASIC17.71■□□□□ 0.43
Sptlc1O35704 Gm25406-201ENSMUST00000157599 105 ntBASIC17.71■□□□□ 0.43
Sptlc1O35704 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Sptlc1O35704 Gm40849-201ENSMUST00000222330 603 ntTSL 3 BASIC17.71■□□□□ 0.43
Sptlc1O35704 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Sptlc1O35704 Psma5-201ENSMUST00000090569 1239 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Sptlc1O35704 Slc46a1-201ENSMUST00000001126 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Sptlc1O35704 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.71■□□□□ 0.43
Sptlc1O35704 Zmym3-204ENSMUST00000118092 1502 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Sptlc1O35704 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC17.71■□□□□ 0.43
Sptlc1O35704 Pacsin3-202ENSMUST00000059566 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Sptlc1O35704 Itgb7-201ENSMUST00000001327 2674 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Sptlc1O35704 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC17.71■□□□□ 0.43
Sptlc1O35704 Gm45277-201ENSMUST00000210549 1695 ntTSL 1 (best) BASIC17.71■□□□□ 0.42
Sptlc1O35704 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC17.71■□□□□ 0.42
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms