Protein–RNA interactions for Protein: O35701

Matn3, Matrilin-3, mousemouse

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Matn3O35701 Slmap-203ENSMUST00000102956 5476 ntAPPRIS P3 TSL 5 BASIC14.82□□□□□ -0.04
Matn3O35701 Iqsec1-202ENSMUST00000101153 8036 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Matn3O35701 Aaed1-207ENSMUST00000222570 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Matn3O35701 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Matn3O35701 Dtnbp1-203ENSMUST00000220555 1589 ntAPPRIS ALT2 TSL 5 BASIC14.81□□□□□ -0.04
Matn3O35701 Zfc3h1-201ENSMUST00000036044 6957 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Matn3O35701 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Matn3O35701 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC14.81□□□□□ -0.04
Matn3O35701 Pias3-201ENSMUST00000064900 2931 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Matn3O35701 Jup-202ENSMUST00000107403 2386 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Matn3O35701 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Matn3O35701 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Matn3O35701 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Matn3O35701 Tcf7l1-202ENSMUST00000114053 1888 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Matn3O35701 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Matn3O35701 Ppp1r8-202ENSMUST00000105919 1090 ntAPPRIS ALT1 TSL 3 BASIC14.81□□□□□ -0.04
Matn3O35701 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Matn3O35701 Vkorc1-202ENSMUST00000119922 387 ntTSL 3 BASIC14.81□□□□□ -0.04
Matn3O35701 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Matn3O35701 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC14.81□□□□□ -0.04
Matn3O35701 Khdc1c-201ENSMUST00000070223 1946 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Matn3O35701 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC14.81□□□□□ -0.04
Matn3O35701 Cldn5-201ENSMUST00000043577 1414 ntAPPRIS P1 BASIC14.81□□□□□ -0.04
Matn3O35701 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Matn3O35701 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC14.81□□□□□ -0.04
Matn3O35701 Henmt1-202ENSMUST00000098680 1466 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Matn3O35701 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC14.81□□□□□ -0.04
Matn3O35701 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Matn3O35701 Dnajb14-201ENSMUST00000090178 9477 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Matn3O35701 Snx18-201ENSMUST00000109241 4447 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Matn3O35701 Gm45203-201ENSMUST00000206384 1831 ntBASIC14.8□□□□□ -0.04
Matn3O35701 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Matn3O35701 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC14.8□□□□□ -0.04
Matn3O35701 AC163637.1-201ENSMUST00000215491 1894 ntBASIC14.8□□□□□ -0.04
Matn3O35701 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Matn3O35701 Chst14-202ENSMUST00000110837 1991 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Matn3O35701 Gm27528-202ENSMUST00000222916 2012 ntBASIC14.8□□□□□ -0.04
Matn3O35701 Gm43352-201ENSMUST00000196419 3065 ntBASIC14.8□□□□□ -0.04
Matn3O35701 Wtap-201ENSMUST00000007007 2051 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Matn3O35701 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC14.8□□□□□ -0.04
Matn3O35701 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Matn3O35701 Rimbp3-201ENSMUST00000169803 5787 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Matn3O35701 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Matn3O35701 Immp2l-203ENSMUST00000134965 977 ntAPPRIS P1 TSL 5 BASIC14.8□□□□□ -0.04
Matn3O35701 2610035F20Rik-202ENSMUST00000177306 1149 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Matn3O35701 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Matn3O35701 Gm19391-201ENSMUST00000196653 999 ntTSL 3 BASIC14.8□□□□□ -0.04
Matn3O35701 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC14.8□□□□□ -0.04
Matn3O35701 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Matn3O35701 Naxe-201ENSMUST00000029708 908 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Matn3O35701 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC14.8□□□□□ -0.04
Matn3O35701 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Matn3O35701 Shisa7-201ENSMUST00000066041 6006 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Matn3O35701 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Matn3O35701 Cdk10-201ENSMUST00000036880 1642 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Matn3O35701 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Matn3O35701 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC14.8□□□□□ -0.04
Matn3O35701 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Matn3O35701 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Matn3O35701 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Matn3O35701 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC14.8□□□□□ -0.04
Matn3O35701 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC14.8□□□□□ -0.04
Matn3O35701 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Matn3O35701 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Matn3O35701 Ccne2-207ENSMUST00000170901 3006 ntAPPRIS P4 TSL 1 (best) BASIC14.79□□□□□ -0.04
Matn3O35701 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC14.79□□□□□ -0.04
Matn3O35701 Nsfl1c-203ENSMUST00000103160 1369 ntTSL 5 BASIC14.79□□□□□ -0.04
Matn3O35701 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Matn3O35701 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC14.79□□□□□ -0.04
Matn3O35701 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC14.79□□□□□ -0.04
Matn3O35701 5730522E02Rik-201ENSMUST00000109511 1162 ntAPPRIS P5 TSL 1 (best) BASIC14.79□□□□□ -0.04
Matn3O35701 Arl6ip4-202ENSMUST00000122394 982 ntAPPRIS ALT2 TSL 5 BASIC14.79□□□□□ -0.04
Matn3O35701 Cacna1h-202ENSMUST00000159048 8174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Matn3O35701 Agbl5-213ENSMUST00000201917 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Matn3O35701 AC122769.4-201ENSMUST00000228166 901 ntBASIC14.79□□□□□ -0.04
Matn3O35701 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC14.79□□□□□ -0.04
Matn3O35701 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC14.79□□□□□ -0.04
Matn3O35701 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC14.79□□□□□ -0.04
Matn3O35701 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC14.79□□□□□ -0.04
Matn3O35701 Ncf1-201ENSMUST00000016094 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC14.79□□□□□ -0.04
Matn3O35701 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Matn3O35701 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Matn3O35701 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC14.78□□□□□ -0.04
Matn3O35701 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Matn3O35701 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Matn3O35701 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Matn3O35701 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Matn3O35701 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC14.78□□□□□ -0.04
Matn3O35701 Rb1-201ENSMUST00000022701 4656 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Matn3O35701 Prmt6-203ENSMUST00000190378 3051 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Matn3O35701 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC14.78□□□□□ -0.04
Matn3O35701 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC14.78□□□□□ -0.04
Matn3O35701 Mrps18a-202ENSMUST00000123646 621 ntTSL 2 BASIC14.78□□□□□ -0.04
Matn3O35701 Gm7075-201ENSMUST00000054760 425 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Matn3O35701 Sbno2-204ENSMUST00000217972 2462 ntTSL 2 BASIC14.78□□□□□ -0.04
Matn3O35701 Nrxn1-204ENSMUST00000159778 3414 ntTSL 5 BASIC14.78□□□□□ -0.04
Matn3O35701 Hnrnpu-201ENSMUST00000037748 7640 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Matn3O35701 Mrps2-201ENSMUST00000038600 2080 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Matn3O35701 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Matn3O35701 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 49.9 ms