Protein–RNA interactions for Protein: O35627

Nr1i3, Nuclear receptor subfamily 1 group I member 3, mousemouse

Predictions only

Length 358 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nr1i3O35627 AC153526.5-201ENSMUST00000218661 2147 ntBASIC17.47■□□□□ 0.39
Nr1i3O35627 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nr1i3O35627 Atxn7l3-202ENSMUST00000107132 3706 ntAPPRIS P4 TSL 5 BASIC17.47■□□□□ 0.39
Nr1i3O35627 Gm26643-201ENSMUST00000180854 1274 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Nr1i3O35627 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC17.47■□□□□ 0.39
Nr1i3O35627 Zfpl1-201ENSMUST00000025707 1287 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nr1i3O35627 Hoxa6-201ENSMUST00000062829 874 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nr1i3O35627 Olfr1272-201ENSMUST00000099750 927 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Nr1i3O35627 Edn2-201ENSMUST00000030384 1462 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nr1i3O35627 Jam2-201ENSMUST00000098407 1998 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Nr1i3O35627 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nr1i3O35627 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nr1i3O35627 Gramd4-204ENSMUST00000138134 4292 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Nr1i3O35627 Chst2-201ENSMUST00000036267 7328 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Nr1i3O35627 Lhx8-205ENSMUST00000205251 1729 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Nr1i3O35627 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
Nr1i3O35627 Usp6nl-202ENSMUST00000114937 7484 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Nr1i3O35627 Pkn1-201ENSMUST00000005616 6662 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Nr1i3O35627 Dync1li2-201ENSMUST00000041769 4627 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Nr1i3O35627 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Nr1i3O35627 Spdya-204ENSMUST00000167641 1891 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Nr1i3O35627 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Nr1i3O35627 Ptpdc1-201ENSMUST00000035824 4402 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Nr1i3O35627 Sprn-201ENSMUST00000059241 3374 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Nr1i3O35627 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Nr1i3O35627 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Nr1i3O35627 Rapgef3os1-201ENSMUST00000149373 483 ntTSL 3 BASIC17.46■□□□□ 0.39
Nr1i3O35627 Gm11973-203ENSMUST00000155498 867 ntTSL 3 BASIC17.46■□□□□ 0.39
Nr1i3O35627 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
Nr1i3O35627 Srrd-201ENSMUST00000031289 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Nr1i3O35627 Hist1h3g-201ENSMUST00000080859 530 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Nr1i3O35627 Dmpk-203ENSMUST00000108474 2591 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Nr1i3O35627 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
Nr1i3O35627 4833445I07Rik-201ENSMUST00000193193 1642 ntBASIC17.46■□□□□ 0.39
Nr1i3O35627 Fmnl2-202ENSMUST00000050719 3380 ntTSL 5 BASIC17.46■□□□□ 0.39
Nr1i3O35627 Xpo6-213ENSMUST00000168189 4552 ntAPPRIS ALT1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Nr1i3O35627 Gm44729-201ENSMUST00000206759 2052 ntBASIC17.46■□□□□ 0.39
Nr1i3O35627 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Nr1i3O35627 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.38
Nr1i3O35627 Ttc13-202ENSMUST00000117624 3096 ntTSL 5 BASIC17.46■□□□□ 0.38
Nr1i3O35627 2210016F16Rik-201ENSMUST00000022032 3051 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Nr1i3O35627 Lrrn2-201ENSMUST00000027706 3428 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
Nr1i3O35627 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.38
Nr1i3O35627 Nploc4-202ENSMUST00000103017 4025 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Nr1i3O35627 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC17.45■□□□□ 0.38
Nr1i3O35627 Arrdc1-202ENSMUST00000102935 1574 ntAPPRIS P3 TSL 1 (best) BASIC17.45■□□□□ 0.38
Nr1i3O35627 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Nr1i3O35627 Tcf24-202ENSMUST00000185184 4193 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Nr1i3O35627 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Nr1i3O35627 Mrpl37-201ENSMUST00000030365 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Nr1i3O35627 Krt90-201ENSMUST00000023714 2534 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Nr1i3O35627 Ell2-201ENSMUST00000001583 4382 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Nr1i3O35627 Mtcl1-202ENSMUST00000097291 7274 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Nr1i3O35627 Cacna1b-204ENSMUST00000102939 9736 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Nr1i3O35627 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Nr1i3O35627 Gm12979-201ENSMUST00000145488 405 ntTSL 2 BASIC17.45■□□□□ 0.38
Nr1i3O35627 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC17.45■□□□□ 0.38
Nr1i3O35627 Gm19345-201ENSMUST00000172815 993 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Nr1i3O35627 Gm7889-201ENSMUST00000185591 958 ntBASIC17.45■□□□□ 0.38
Nr1i3O35627 Ube2a-208ENSMUST00000202812 719 ntTSL 2 BASIC17.45■□□□□ 0.38
Nr1i3O35627 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Nr1i3O35627 Prr29-201ENSMUST00000009354 1112 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Nr1i3O35627 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Nr1i3O35627 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Nr1i3O35627 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Nr1i3O35627 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC17.45■□□□□ 0.38
Nr1i3O35627 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Nr1i3O35627 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Nr1i3O35627 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Nr1i3O35627 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Nr1i3O35627 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Nr1i3O35627 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Nr1i3O35627 Fndc11-202ENSMUST00000108835 1154 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
Nr1i3O35627 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC17.44■□□□□ 0.38
Nr1i3O35627 Gm8797-201ENSMUST00000192045 490 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Nr1i3O35627 BC048679-203ENSMUST00000207871 567 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Nr1i3O35627 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC17.44■□□□□ 0.38
Nr1i3O35627 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Nr1i3O35627 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Nr1i3O35627 Cacna1a-201ENSMUST00000121390 7926 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
Nr1i3O35627 Nbea-201ENSMUST00000029374 10986 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Nr1i3O35627 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Nr1i3O35627 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Nr1i3O35627 Pacsin2-203ENSMUST00000171436 3693 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Nr1i3O35627 Zbtb2-201ENSMUST00000100077 3086 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Nr1i3O35627 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Nr1i3O35627 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC17.43■□□□□ 0.38
Nr1i3O35627 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Nr1i3O35627 Rhbg-201ENSMUST00000171887 1937 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Nr1i3O35627 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Nr1i3O35627 Thsd7a-202ENSMUST00000119581 5678 ntAPPRIS P2 TSL 5 BASIC17.43■□□□□ 0.38
Nr1i3O35627 Mbnl1-201ENSMUST00000099087 5655 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Nr1i3O35627 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Nr1i3O35627 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Nr1i3O35627 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Nr1i3O35627 Seh1l-201ENSMUST00000025421 3516 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Nr1i3O35627 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Nr1i3O35627 Gm15545-203ENSMUST00000150613 1059 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Nr1i3O35627 4930544D05Rik-204ENSMUST00000180052 755 ntAPPRIS ALT2 TSL 5 BASIC17.43■□□□□ 0.38
Nr1i3O35627 Gm27389-201ENSMUST00000183622 195 ntBASIC17.43■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 25.4 ms