Protein–RNA interactions for Protein: O35600

Abca4, Retinal-specific ATP-binding cassette transporter, mousemouse

Predictions only

Length 2,310 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abca4O35600 Rbfox2-208ENSMUST00000227930 1218 ntBASIC15.22■□□□□ 0.03
Abca4O35600 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Abca4O35600 Mlf1-202ENSMUST00000077916 1114 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Abca4O35600 Iqcd-201ENSMUST00000069259 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Abca4O35600 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Abca4O35600 Lrrfip1-201ENSMUST00000068116 2050 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Abca4O35600 Ipmk-201ENSMUST00000079252 5447 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Abca4O35600 Gja3-201ENSMUST00000061614 2766 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Abca4O35600 Mycl-202ENSMUST00000106252 3293 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Abca4O35600 Gm833-201ENSMUST00000143133 884 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Abca4O35600 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Abca4O35600 Gm28631-201ENSMUST00000190740 334 ntBASIC15.22■□□□□ 0.03
Abca4O35600 Gm7787-201ENSMUST00000216858 688 ntBASIC15.22■□□□□ 0.03
Abca4O35600 Gchfr-201ENSMUST00000057454 645 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Abca4O35600 Tmem237-201ENSMUST00000087475 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Abca4O35600 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Abca4O35600 Elac2-203ENSMUST00000108697 2612 ntAPPRIS ALT2 TSL 5 BASIC15.22■□□□□ 0.03
Abca4O35600 Gm4779-203ENSMUST00000147742 1991 ntAPPRIS P1 TSL 5 BASIC15.22■□□□□ 0.03
Abca4O35600 Shq1-204ENSMUST00000170667 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Abca4O35600 Actg1-202ENSMUST00000071555 1952 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Abca4O35600 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Abca4O35600 Acot2-201ENSMUST00000021649 2196 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Abca4O35600 Rbm43-201ENSMUST00000102767 2057 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Abca4O35600 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Abca4O35600 Gm5366-201ENSMUST00000215494 1338 ntBASIC15.21■□□□□ 0.03
Abca4O35600 Yipf3-201ENSMUST00000095263 2035 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Abca4O35600 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC15.21■□□□□ 0.03
Abca4O35600 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Abca4O35600 Hes5-201ENSMUST00000049621 1273 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Abca4O35600 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Abca4O35600 Glipr2-201ENSMUST00000030202 2320 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Abca4O35600 Sult2b1-204ENSMUST00000209739 1858 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
Abca4O35600 4930512B01Rik-201ENSMUST00000021378 1856 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Abca4O35600 Itgb5-202ENSMUST00000115028 3090 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Abca4O35600 Etv5-201ENSMUST00000079601 3975 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Abca4O35600 Magi3-201ENSMUST00000064371 6640 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.02
Abca4O35600 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Abca4O35600 Etfrf1-206ENSMUST00000111725 872 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.02
Abca4O35600 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.02
Abca4O35600 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC15.21■□□□□ 0.02
Abca4O35600 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC15.21■□□□□ 0.02
Abca4O35600 Mir8102-201ENSMUST00000184148 139 ntBASIC15.21■□□□□ 0.02
Abca4O35600 Trip6-203ENSMUST00000199121 366 ntTSL 3 BASIC15.21■□□□□ 0.02
Abca4O35600 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC15.21■□□□□ 0.02
Abca4O35600 AC124732.1-201ENSMUST00000221551 910 ntBASIC15.21■□□□□ 0.02
Abca4O35600 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC15.21■□□□□ 0.02
Abca4O35600 Kmt5b-204ENSMUST00000113970 2975 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
Abca4O35600 Vhl-201ENSMUST00000035673 2792 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Abca4O35600 Dtnb-222ENSMUST00000174479 3689 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Abca4O35600 Mef2d-202ENSMUST00000107558 1767 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Abca4O35600 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC15.2■□□□□ 0.02
Abca4O35600 Dtwd2-201ENSMUST00000025383 2476 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Abca4O35600 Dtx3-201ENSMUST00000038217 1944 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Abca4O35600 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Abca4O35600 Gm6018-201ENSMUST00000216090 1306 ntBASIC15.2■□□□□ 0.02
Abca4O35600 AC119177.1-201ENSMUST00000227647 1332 ntBASIC15.2■□□□□ 0.02
Abca4O35600 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Abca4O35600 Apoo-204ENSMUST00000113898 784 ntAPPRIS P1 TSL 3 BASIC15.2■□□□□ 0.02
Abca4O35600 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Abca4O35600 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC15.2■□□□□ 0.02
Abca4O35600 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC15.2■□□□□ 0.02
Abca4O35600 1700047K16Rik-201ENSMUST00000145068 886 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Abca4O35600 Gm17251-201ENSMUST00000170103 925 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Abca4O35600 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC15.2■□□□□ 0.02
Abca4O35600 Syt9-201ENSMUST00000073459 3817 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Abca4O35600 Agbl5-209ENSMUST00000201225 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Abca4O35600 Med16-204ENSMUST00000165684 2950 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Abca4O35600 Mtss1l-201ENSMUST00000052457 4717 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Abca4O35600 Arl4c-203ENSMUST00000187810 2740 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Abca4O35600 Enah-205ENSMUST00000177811 4231 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
Abca4O35600 Ints6-201ENSMUST00000053959 4993 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Abca4O35600 Adam22-205ENSMUST00000115385 2318 ntTSL 2 BASIC15.2■□□□□ 0.02
Abca4O35600 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Abca4O35600 Gm15693-201ENSMUST00000120470 637 ntBASIC15.2■□□□□ 0.02
Abca4O35600 1700121C08Rik-201ENSMUST00000137546 677 ntTSL 3 BASIC15.2■□□□□ 0.02
Abca4O35600 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Abca4O35600 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Abca4O35600 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Abca4O35600 Prmt8-201ENSMUST00000032500 2724 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Abca4O35600 Crlf3-201ENSMUST00000061283 2396 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Abca4O35600 AC125311.2-201ENSMUST00000227477 1940 ntBASIC15.19■□□□□ 0.02
Abca4O35600 Tbc1d2b-202ENSMUST00000128874 3473 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Abca4O35600 Cnn2-201ENSMUST00000004784 2460 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Abca4O35600 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Abca4O35600 Gm26664-201ENSMUST00000181140 705 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Abca4O35600 Mturn-202ENSMUST00000187701 503 ntTSL 5 BASIC15.19■□□□□ 0.02
Abca4O35600 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Abca4O35600 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Abca4O35600 Ckb-201ENSMUST00000001304 1472 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Abca4O35600 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Abca4O35600 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Abca4O35600 AL590614.2-201ENSMUST00000225374 1937 ntBASIC15.19■□□□□ 0.02
Abca4O35600 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Abca4O35600 Gm6226-201ENSMUST00000117765 1146 ntBASIC15.18■□□□□ 0.02
Abca4O35600 Gm14928-201ENSMUST00000120198 477 ntBASIC15.18■□□□□ 0.02
Abca4O35600 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC15.18■□□□□ 0.02
Abca4O35600 2310002F09Rik-201ENSMUST00000181454 1607 ntTSL 1 (best) BASIC15.18■□□□□ 0.02
Abca4O35600 Ksr1-201ENSMUST00000018478 5495 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Abca4O35600 Ubap1l-201ENSMUST00000147185 1380 ntAPPRIS P1 TSL 5 BASIC15.18■□□□□ 0.02
Abca4O35600 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC15.18■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 27.8 ms