Protein–RNA interactions for Protein: O35454

Clcn6, Chloride transport protein 6, mousemouse

Predictions only

Length 870 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn6O35454 Knl1-201ENSMUST00000028799 5527 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Clcn6O35454 Jade2-202ENSMUST00000109090 6230 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Clcn6O35454 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Clcn6O35454 Tdg-ps-201ENSMUST00000051363 2968 ntBASIC17.45■□□□□ 0.38
Clcn6O35454 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Clcn6O35454 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Clcn6O35454 Gm13181-201ENSMUST00000120117 1069 ntBASIC17.45■□□□□ 0.38
Clcn6O35454 Gm12718-202ENSMUST00000156144 660 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Clcn6O35454 Gm6576-201ENSMUST00000169678 883 ntBASIC17.45■□□□□ 0.38
Clcn6O35454 Gm26609-201ENSMUST00000181302 852 ntTSL 5 BASIC17.45■□□□□ 0.38
Clcn6O35454 Gm10698-201ENSMUST00000182663 604 ntBASIC17.45■□□□□ 0.38
Clcn6O35454 Gm37293-201ENSMUST00000191658 295 ntBASIC17.45■□□□□ 0.38
Clcn6O35454 Gm42556-201ENSMUST00000201397 607 ntTSL 3 BASIC17.45■□□□□ 0.38
Clcn6O35454 Gm45148-201ENSMUST00000208578 513 ntTSL 5 BASIC17.45■□□□□ 0.38
Clcn6O35454 Speer6-ps1-203ENSMUST00000223482 979 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Clcn6O35454 Rtl8a-201ENSMUST00000088779 1195 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Clcn6O35454 Sclt1-201ENSMUST00000026866 3005 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Clcn6O35454 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Clcn6O35454 Zkscan2-203ENSMUST00000128217 2218 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Clcn6O35454 Sytl3-201ENSMUST00000097430 2100 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Clcn6O35454 Eif1a-202ENSMUST00000168382 1750 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Clcn6O35454 Rbck1-202ENSMUST00000109847 2384 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Clcn6O35454 4430402I18Rik-205ENSMUST00000162110 1559 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
Clcn6O35454 AW011738-201ENSMUST00000105140 1848 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Clcn6O35454 Aida-206ENSMUST00000193625 1810 ntTSL 3 BASIC17.44■□□□□ 0.38
Clcn6O35454 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Clcn6O35454 Yipf4-201ENSMUST00000024873 2133 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Clcn6O35454 Gal3st1-201ENSMUST00000063004 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Clcn6O35454 Disp3-201ENSMUST00000047720 5282 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Clcn6O35454 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Clcn6O35454 2300003K06Rik-201ENSMUST00000105054 1265 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Clcn6O35454 Gm15074-201ENSMUST00000117603 936 ntBASIC17.44■□□□□ 0.38
Clcn6O35454 Mrps10-204ENSMUST00000120737 1017 ntAPPRIS ALT1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Clcn6O35454 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC17.44■□□□□ 0.38
Clcn6O35454 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Clcn6O35454 Gm37292-201ENSMUST00000192062 758 ntBASIC17.44■□□□□ 0.38
Clcn6O35454 4833403J16Rik-201ENSMUST00000204490 1031 ntBASIC17.44■□□□□ 0.38
Clcn6O35454 Gm44899-201ENSMUST00000207451 391 ntTSL 3 BASIC17.44■□□□□ 0.38
Clcn6O35454 Aprt-204ENSMUST00000212093 723 ntTSL 2 BASIC17.44■□□□□ 0.38
Clcn6O35454 AC118750.1-201ENSMUST00000214163 675 ntTSL 3 BASIC17.44■□□□□ 0.38
Clcn6O35454 mt-Nd2-201ENSMUST00000082396 1038 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
Clcn6O35454 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Clcn6O35454 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
Clcn6O35454 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
Clcn6O35454 Ttbk1-201ENSMUST00000047034 6959 ntAPPRIS P2 TSL 5 BASIC17.44■□□□□ 0.38
Clcn6O35454 Nsmaf-201ENSMUST00000029910 3507 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Clcn6O35454 Gnas-202ENSMUST00000087871 3903 ntAPPRIS P4 TSL 1 (best) BASIC17.44■□□□□ 0.38
Clcn6O35454 Proc-201ENSMUST00000171765 1566 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
Clcn6O35454 Gm43272-201ENSMUST00000200599 1584 ntBASIC17.44■□□□□ 0.38
Clcn6O35454 4930461C15Rik-201ENSMUST00000133622 1302 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Clcn6O35454 9530080O11Rik-201ENSMUST00000137239 1475 ntTSL 2 BASIC17.44■□□□□ 0.38
Clcn6O35454 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC17.43■□□□□ 0.38
Clcn6O35454 Mcoln2-202ENSMUST00000098524 2492 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Clcn6O35454 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Clcn6O35454 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Clcn6O35454 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Clcn6O35454 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
Clcn6O35454 Ptprd-206ENSMUST00000107289 9899 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Clcn6O35454 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC17.43■□□□□ 0.38
Clcn6O35454 Ankrd23-201ENSMUST00000054665 1964 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Clcn6O35454 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Clcn6O35454 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Clcn6O35454 Pbdc1-202ENSMUST00000119477 1239 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Clcn6O35454 Gm25295-201ENSMUST00000122794 306 ntBASIC17.43■□□□□ 0.38
Clcn6O35454 Gm11728-201ENSMUST00000150628 660 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Clcn6O35454 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC17.43■□□□□ 0.38
Clcn6O35454 Gm43316-201ENSMUST00000197252 1295 ntBASIC17.43■□□□□ 0.38
Clcn6O35454 Gm45072-201ENSMUST00000208673 929 ntBASIC17.43■□□□□ 0.38
Clcn6O35454 Gm19212-201ENSMUST00000216642 862 ntBASIC17.43■□□□□ 0.38
Clcn6O35454 Slc25a31-201ENSMUST00000091184 2128 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Clcn6O35454 Kif17-204ENSMUST00000105821 2271 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Clcn6O35454 Casp4-201ENSMUST00000027012 1435 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Clcn6O35454 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC17.43■□□□□ 0.38
Clcn6O35454 Tpd52-205ENSMUST00000120143 6317 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
Clcn6O35454 Wbp1-202ENSMUST00000113936 1314 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Clcn6O35454 Usp49-201ENSMUST00000024779 8252 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Clcn6O35454 Mms22l-202ENSMUST00000108222 4478 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
Clcn6O35454 Ptpro-203ENSMUST00000167679 5096 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
Clcn6O35454 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Clcn6O35454 Dynlt1c-201ENSMUST00000092966 2589 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Clcn6O35454 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Clcn6O35454 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Clcn6O35454 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC17.42■□□□□ 0.38
Clcn6O35454 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Clcn6O35454 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
Clcn6O35454 Mapt-202ENSMUST00000106988 2202 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
Clcn6O35454 Cops7b-201ENSMUST00000027446 2231 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Clcn6O35454 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
Clcn6O35454 Dctd-205ENSMUST00000174278 799 ntAPPRIS P1 TSL 3 BASIC17.42■□□□□ 0.38
Clcn6O35454 Gm28379-201ENSMUST00000186450 554 ntTSL 5 BASIC17.42■□□□□ 0.38
Clcn6O35454 Smarcc1-204ENSMUST00000197984 3538 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Clcn6O35454 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Clcn6O35454 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
Clcn6O35454 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
Clcn6O35454 Ssu72-201ENSMUST00000030905 1472 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Clcn6O35454 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Clcn6O35454 Dcaf17-203ENSMUST00000112159 2490 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Clcn6O35454 Tacc1-201ENSMUST00000084030 7788 ntAPPRIS P4 TSL 1 (best) BASIC17.42■□□□□ 0.38
Clcn6O35454 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
Clcn6O35454 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 25.1 ms