Protein–RNA interactions for Protein: O35235

Tnfsf11, Tumor necrosis factor ligand superfamily member 11, mousemouse

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf11O35235 Gm45623-201ENSMUST00000210744 1457 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Tnfsf11O35235 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC12.72□□□□□ -0.37
Tnfsf11O35235 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Tnfsf11O35235 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC12.72□□□□□ -0.37
Tnfsf11O35235 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC12.72□□□□□ -0.37
Tnfsf11O35235 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC12.72□□□□□ -0.37
Tnfsf11O35235 Zkscan6-202ENSMUST00000071465 2270 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Tnfsf11O35235 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Tnfsf11O35235 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Tnfsf11O35235 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Tnfsf11O35235 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC12.72□□□□□ -0.37
Tnfsf11O35235 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Tnfsf11O35235 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Tnfsf11O35235 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Tnfsf11O35235 Ccdc58-202ENSMUST00000163352 970 ntTSL 3 BASIC12.72□□□□□ -0.37
Tnfsf11O35235 Ccdc58-203ENSMUST00000164916 1096 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Tnfsf11O35235 4930554G22Rik-201ENSMUST00000196102 686 ntBASIC12.72□□□□□ -0.37
Tnfsf11O35235 Gm44672-201ENSMUST00000206944 1098 ntBASIC12.72□□□□□ -0.37
Tnfsf11O35235 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Tnfsf11O35235 Olfr322-201ENSMUST00000072030 984 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Tnfsf11O35235 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC12.72□□□□□ -0.37
Tnfsf11O35235 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Tnfsf11O35235 Gpr3-202ENSMUST00000105911 2518 ntAPPRIS P1 BASIC12.72□□□□□ -0.37
Tnfsf11O35235 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Tnfsf11O35235 1700052K11Rik-201ENSMUST00000190120 3708 ntBASIC12.72□□□□□ -0.37
Tnfsf11O35235 4930432B10Rik-202ENSMUST00000181330 1612 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Tnfsf11O35235 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Tnfsf11O35235 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Tnfsf11O35235 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Tnfsf11O35235 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Tnfsf11O35235 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Tnfsf11O35235 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Tnfsf11O35235 AI314180-201ENSMUST00000055822 1478 ntTSL 1 (best) BASIC12.72□□□□□ -0.37
Tnfsf11O35235 Gfy-201ENSMUST00000179443 1849 ntAPPRIS P1 TSL 5 BASIC12.72□□□□□ -0.37
Tnfsf11O35235 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Tnfsf11O35235 Plk1-201ENSMUST00000033154 2199 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Tnfsf11O35235 Sptlc2-201ENSMUST00000021424 6710 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Tnfsf11O35235 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Tnfsf11O35235 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC12.71□□□□□ -0.37
Tnfsf11O35235 Cdca7-201ENSMUST00000102691 2424 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Tnfsf11O35235 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC12.71□□□□□ -0.37
Tnfsf11O35235 Gpn2-201ENSMUST00000030661 1367 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Tnfsf11O35235 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Tnfsf11O35235 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Tnfsf11O35235 Arid3c-202ENSMUST00000150809 1327 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Tnfsf11O35235 Cldn7-201ENSMUST00000018713 1335 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Tnfsf11O35235 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Tnfsf11O35235 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Tnfsf11O35235 Rmnd5b-201ENSMUST00000001081 1946 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Tnfsf11O35235 Gm15648-201ENSMUST00000149681 778 ntTSL 5 BASIC12.71□□□□□ -0.37
Tnfsf11O35235 Gm24841-201ENSMUST00000158676 357 ntBASIC12.71□□□□□ -0.37
Tnfsf11O35235 Gm17661-201ENSMUST00000170317 270 ntBASIC12.71□□□□□ -0.37
Tnfsf11O35235 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Tnfsf11O35235 Gm9780-201ENSMUST00000184272 350 ntTSL 2 BASIC12.71□□□□□ -0.37
Tnfsf11O35235 Rtl8b-201ENSMUST00000088778 1232 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Tnfsf11O35235 Chrac1-201ENSMUST00000089765 871 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Tnfsf11O35235 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC12.71□□□□□ -0.37
Tnfsf11O35235 Shox2-202ENSMUST00000162060 1537 ntTSL 3 BASIC12.71□□□□□ -0.38
Tnfsf11O35235 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Tnfsf11O35235 Lrrc56-203ENSMUST00000084446 2390 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Tnfsf11O35235 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Tnfsf11O35235 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Tnfsf11O35235 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Tnfsf11O35235 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Tnfsf11O35235 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Tnfsf11O35235 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Tnfsf11O35235 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Tnfsf11O35235 Dand5-201ENSMUST00000065539 1584 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Tnfsf11O35235 App-207ENSMUST00000227737 2827 ntBASIC12.7□□□□□ -0.38
Tnfsf11O35235 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC12.7□□□□□ -0.38
Tnfsf11O35235 Tpsg1-204ENSMUST00000160920 867 ntTSL 3 BASIC12.7□□□□□ -0.38
Tnfsf11O35235 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Tnfsf11O35235 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC12.7□□□□□ -0.38
Tnfsf11O35235 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Tnfsf11O35235 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Tnfsf11O35235 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Tnfsf11O35235 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC12.7□□□□□ -0.38
Tnfsf11O35235 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Tnfsf11O35235 Kmt5b-213ENSMUST00000176262 3933 ntAPPRIS P3 TSL 5 BASIC12.7□□□□□ -0.38
Tnfsf11O35235 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC12.7□□□□□ -0.38
Tnfsf11O35235 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Tnfsf11O35235 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC12.7□□□□□ -0.38
Tnfsf11O35235 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Tnfsf11O35235 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Tnfsf11O35235 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Tnfsf11O35235 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Tnfsf11O35235 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Tnfsf11O35235 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Tnfsf11O35235 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Tnfsf11O35235 Atg4d-201ENSMUST00000065005 5951 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Tnfsf11O35235 Nkx1-2-201ENSMUST00000054562 3264 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Tnfsf11O35235 Dennd1a-201ENSMUST00000102787 4342 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Tnfsf11O35235 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Tnfsf11O35235 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Tnfsf11O35235 Gm8773-201ENSMUST00000101627 1268 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Tnfsf11O35235 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Tnfsf11O35235 Gm3807-201ENSMUST00000193520 1168 ntBASIC12.69□□□□□ -0.38
Tnfsf11O35235 Gm37179-201ENSMUST00000194862 823 ntBASIC12.69□□□□□ -0.38
Tnfsf11O35235 Trappc6a-201ENSMUST00000002112 785 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Tnfsf11O35235 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 33.9 ms