Protein–RNA interactions for Protein: O35206

Col15a1, Collagen alpha-1(XV) chain, mousemouse

Predictions only

Length 1,367 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col15a1O35206 Adamtsl1-201ENSMUST00000048885 1842 ntTSL 5 BASIC20.75■□□□□ 0.91
Col15a1O35206 Oxsr1-201ENSMUST00000040853 4647 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
Col15a1O35206 Eomes-202ENSMUST00000111763 2869 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
Col15a1O35206 Gm37811-201ENSMUST00000192416 2601 ntBASIC20.74■□□□□ 0.91
Col15a1O35206 Nisch-208ENSMUST00000165981 2415 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
Col15a1O35206 Dcdc2c-206ENSMUST00000221349 2209 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
Col15a1O35206 Sh2b2-203ENSMUST00000196397 2797 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Col15a1O35206 Gm14317-201ENSMUST00000151754 1464 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Col15a1O35206 Gm45799-202ENSMUST00000106786 409 ntAPPRIS ALT2 TSL 3 BASIC20.74■□□□□ 0.91
Col15a1O35206 Chchd6-202ENSMUST00000113550 1042 ntTSL 5 BASIC20.74■□□□□ 0.91
Col15a1O35206 Gm17968-201ENSMUST00000194902 784 ntBASIC20.74■□□□□ 0.91
Col15a1O35206 Chchd6-201ENSMUST00000032172 1121 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Col15a1O35206 Rpl28-202ENSMUST00000078432 772 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
Col15a1O35206 Lmnb2-202ENSMUST00000105332 1643 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Col15a1O35206 Atp6v1c2-201ENSMUST00000020884 1569 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Col15a1O35206 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
Col15a1O35206 Adamts18-201ENSMUST00000093113 5642 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Col15a1O35206 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC20.74■□□□□ 0.91
Col15a1O35206 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
Col15a1O35206 Zc3h14-203ENSMUST00000110104 3146 ntTSL 5 BASIC20.74■□□□□ 0.91
Col15a1O35206 Mprip-202ENSMUST00000072031 8718 ntAPPRIS P4 TSL 1 (best) BASIC20.73■□□□□ 0.91
Col15a1O35206 Gm13597-201ENSMUST00000121239 375 ntBASIC20.73■□□□□ 0.91
Col15a1O35206 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC20.73■□□□□ 0.91
Col15a1O35206 Edn3-203ENSMUST00000140908 731 ntAPPRIS ALT2 TSL 5 BASIC20.73■□□□□ 0.91
Col15a1O35206 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Col15a1O35206 Olfr615-201ENSMUST00000098198 942 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
Col15a1O35206 Nrl-201ENSMUST00000062232 2504 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Col15a1O35206 Serinc2-203ENSMUST00000122374 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
Col15a1O35206 Clasrp-201ENSMUST00000086041 2180 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Col15a1O35206 Prnp-201ENSMUST00000091288 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Col15a1O35206 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Col15a1O35206 Atp1b1-201ENSMUST00000027863 2580 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Col15a1O35206 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Col15a1O35206 Aebp2-202ENSMUST00000087614 3727 ntAPPRIS P4 TSL 1 (best) BASIC20.73■□□□□ 0.91
Col15a1O35206 Ttc19-201ENSMUST00000050646 3410 ntAPPRIS P3 TSL 1 (best) BASIC20.73■□□□□ 0.91
Col15a1O35206 Gm5922-201ENSMUST00000214963 1723 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
Col15a1O35206 Rnf26-201ENSMUST00000056328 2724 ntAPPRIS P2 BASIC20.73■□□□□ 0.91
Col15a1O35206 Txnl1-201ENSMUST00000025476 2558 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Col15a1O35206 Coq8b-202ENSMUST00000108378 2276 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Col15a1O35206 Znhit1-204ENSMUST00000111091 1070 ntTSL 5 BASIC20.72■□□□□ 0.91
Col15a1O35206 Gm15358-201ENSMUST00000119249 520 ntBASIC20.72■□□□□ 0.91
Col15a1O35206 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
Col15a1O35206 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Col15a1O35206 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Col15a1O35206 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Col15a1O35206 Znhit1-206ENSMUST00000156963 1208 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Col15a1O35206 Atp6v1b2-201ENSMUST00000006435 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Col15a1O35206 1700051A21Rik-201ENSMUST00000147937 1516 ntTSL 5 BASIC20.72■□□□□ 0.91
Col15a1O35206 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Col15a1O35206 Rhbdd3-202ENSMUST00000101610 2333 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Col15a1O35206 Irf3-202ENSMUST00000107834 1429 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Col15a1O35206 Gm44832-201ENSMUST00000208849 2303 ntBASIC20.72■□□□□ 0.91
Col15a1O35206 Abi2-206ENSMUST00000188594 1658 ntTSL 5 BASIC20.72■□□□□ 0.91
Col15a1O35206 Rflna-201ENSMUST00000036109 1681 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
Col15a1O35206 Slc26a10-205ENSMUST00000222911 3067 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
Col15a1O35206 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Col15a1O35206 Gm13403-202ENSMUST00000134271 674 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Col15a1O35206 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Col15a1O35206 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Col15a1O35206 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
Col15a1O35206 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
Col15a1O35206 Gjb1-202ENSMUST00000119080 1513 ntAPPRIS P1 TSL 3 BASIC20.72■□□□□ 0.91
Col15a1O35206 1700066B19Rik-201ENSMUST00000097617 2504 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Col15a1O35206 Cabp1-201ENSMUST00000031519 1370 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
Col15a1O35206 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC20.71■□□□□ 0.91
Col15a1O35206 Yars2-204ENSMUST00000159962 2805 ntTSL 2 BASIC20.71■□□□□ 0.91
Col15a1O35206 Slc30a4-202ENSMUST00000099457 3170 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Col15a1O35206 Ube2w-201ENSMUST00000117146 2181 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Col15a1O35206 Ager-209ENSMUST00000174496 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
Col15a1O35206 Eif2b4-201ENSMUST00000077693 2025 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Col15a1O35206 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC20.71■□□□□ 0.91
Col15a1O35206 Npas3-203ENSMUST00000223057 2724 ntAPPRIS ALT2 TSL 5 BASIC20.71■□□□□ 0.91
Col15a1O35206 Ppp1r3f-201ENSMUST00000115742 3066 ntAPPRIS P3 TSL 1 (best) BASIC20.71■□□□□ 0.91
Col15a1O35206 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Col15a1O35206 Gm8344-201ENSMUST00000119813 856 ntBASIC20.71■□□□□ 0.91
Col15a1O35206 Ndufa1-201ENSMUST00000016571 419 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
Col15a1O35206 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC20.71■□□□□ 0.91
Col15a1O35206 Gm16401-202ENSMUST00000197463 2074 ntBASIC20.71■□□□□ 0.91
Col15a1O35206 Sytl1-202ENSMUST00000105908 1730 ntTSL 5 BASIC20.71■□□□□ 0.91
Col15a1O35206 Sh2b1-203ENSMUST00000205440 3089 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Col15a1O35206 Klhdc8b-210ENSMUST00000193895 2718 ntAPPRIS P1 TSL 5 BASIC20.7■□□□□ 0.9
Col15a1O35206 Mbd6-202ENSMUST00000119078 4287 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Col15a1O35206 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Col15a1O35206 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Col15a1O35206 Tmem233-201ENSMUST00000111997 2477 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
Col15a1O35206 Spata6-201ENSMUST00000038868 2466 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Col15a1O35206 Gm11185-201ENSMUST00000117732 1007 ntBASIC20.7■□□□□ 0.9
Col15a1O35206 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Col15a1O35206 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Col15a1O35206 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Col15a1O35206 Rab34-201ENSMUST00000002128 1368 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Col15a1O35206 Gm4353-201ENSMUST00000111755 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Col15a1O35206 Nup35-201ENSMUST00000028382 1559 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
Col15a1O35206 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC20.7■□□□□ 0.9
Col15a1O35206 Gm26526-201ENSMUST00000181075 2927 ntTSL 5 BASIC20.69■□□□□ 0.9
Col15a1O35206 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Col15a1O35206 Rarb-207ENSMUST00000225921 2756 ntBASIC20.69■□□□□ 0.9
Col15a1O35206 Upf1-201ENSMUST00000075666 4618 ntAPPRIS P2 TSL 1 (best) BASIC20.69■□□□□ 0.9
Col15a1O35206 6430710C18Rik-203ENSMUST00000136807 1540 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
Col15a1O35206 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms