Protein–RNA interactions for Protein: O09106

Hdac1, Histone deacetylase 1, mousemouse

Known RBP Predictions only

Length 482 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hdac1O09106 Stam-202ENSMUST00000102960 5000 ntAPPRIS P2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Hdac1O09106 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Hdac1O09106 Myb-203ENSMUST00000188495 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Hdac1O09106 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Hdac1O09106 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC19.35■□□□□ 0.69
Hdac1O09106 Gm27528-202ENSMUST00000222916 2012 ntBASIC19.35■□□□□ 0.69
Hdac1O09106 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Hdac1O09106 Galt-202ENSMUST00000108038 1859 ntAPPRIS ALT2 TSL 2 BASIC19.35■□□□□ 0.69
Hdac1O09106 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
Hdac1O09106 Gm38327-201ENSMUST00000195852 1755 ntBASIC19.34■□□□□ 0.69
Hdac1O09106 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Hdac1O09106 Agfg1-204ENSMUST00000186302 2352 ntAPPRIS ALT1 TSL 5 BASIC19.34■□□□□ 0.69
Hdac1O09106 Chst8-201ENSMUST00000078686 2372 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Hdac1O09106 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Hdac1O09106 Usp47-201ENSMUST00000106653 5540 ntAPPRIS P3 TSL 5 BASIC19.34■□□□□ 0.69
Hdac1O09106 Ewsr1-202ENSMUST00000073308 2269 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Hdac1O09106 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC19.34■□□□□ 0.69
Hdac1O09106 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Hdac1O09106 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC19.34■□□□□ 0.69
Hdac1O09106 Gm26938-201ENSMUST00000182839 744 ntAPPRIS P1 TSL 3 BASIC19.34■□□□□ 0.69
Hdac1O09106 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC19.34■□□□□ 0.69
Hdac1O09106 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Hdac1O09106 Gm15582-201ENSMUST00000132849 1581 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Hdac1O09106 4930448E22Rik-201ENSMUST00000181712 1581 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Hdac1O09106 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Hdac1O09106 Dach1-202ENSMUST00000071533 5219 ntAPPRIS P4 TSL 1 (best) BASIC19.34■□□□□ 0.69
Hdac1O09106 Mapk1-202ENSMUST00000069107 5099 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Hdac1O09106 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC19.34■□□□□ 0.69
Hdac1O09106 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Hdac1O09106 Dock1-206ENSMUST00000211593 2589 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Hdac1O09106 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC19.33■□□□□ 0.69
Hdac1O09106 Naa50-204ENSMUST00000161326 4487 ntAPPRIS ALT1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Hdac1O09106 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Hdac1O09106 Ankib1-201ENSMUST00000043551 6426 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Hdac1O09106 Gm12866-201ENSMUST00000128998 1671 ntTSL 2 BASIC19.33■□□□□ 0.69
Hdac1O09106 Syf2-201ENSMUST00000030622 1369 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Hdac1O09106 Iqsec2-202ENSMUST00000112604 5967 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Hdac1O09106 Plppr4-201ENSMUST00000061071 5696 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Hdac1O09106 Rell1-204ENSMUST00000154169 3241 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Hdac1O09106 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Hdac1O09106 Spsb2-203ENSMUST00000112473 1322 ntBASIC19.33■□□□□ 0.69
Hdac1O09106 Ddhd1-201ENSMUST00000051310 5012 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
Hdac1O09106 Kifc3-203ENSMUST00000169748 3384 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.69
Hdac1O09106 Vcan-201ENSMUST00000109543 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Hdac1O09106 Gm11336-201ENSMUST00000118168 334 ntBASIC19.33■□□□□ 0.68
Hdac1O09106 9130019P16Rik-203ENSMUST00000185712 650 ntTSL 5 BASIC19.33■□□□□ 0.68
Hdac1O09106 Ssr2-207ENSMUST00000195014 1059 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Hdac1O09106 Dcps-201ENSMUST00000034539 1274 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Hdac1O09106 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Hdac1O09106 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Hdac1O09106 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Hdac1O09106 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Hdac1O09106 E030042O20Rik-201ENSMUST00000135244 1427 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
Hdac1O09106 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Hdac1O09106 Unc13b-203ENSMUST00000107953 5034 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Hdac1O09106 Cxxc5-201ENSMUST00000060722 2271 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Hdac1O09106 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC19.32■□□□□ 0.68
Hdac1O09106 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Hdac1O09106 Mon2-202ENSMUST00000073792 9301 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Hdac1O09106 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Hdac1O09106 Ngrn-201ENSMUST00000117989 1317 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Hdac1O09106 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Hdac1O09106 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Hdac1O09106 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Hdac1O09106 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Hdac1O09106 Cib1-207ENSMUST00000206084 772 ntTSL 3 BASIC19.32■□□□□ 0.68
Hdac1O09106 Fam135a-201ENSMUST00000027337 5536 ntAPPRIS P2 TSL 5 BASIC19.32■□□□□ 0.68
Hdac1O09106 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Hdac1O09106 Cib1-202ENSMUST00000071457 702 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Hdac1O09106 Fam214a-202ENSMUST00000170846 4355 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Hdac1O09106 Spdya-201ENSMUST00000064420 1877 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Hdac1O09106 Exoc8-201ENSMUST00000098312 4598 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Hdac1O09106 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Hdac1O09106 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Hdac1O09106 Pigb-207ENSMUST00000184389 2079 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Hdac1O09106 Ankrd63-201ENSMUST00000104937 4861 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Hdac1O09106 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Hdac1O09106 Apmap-201ENSMUST00000046399 2235 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Hdac1O09106 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Hdac1O09106 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Hdac1O09106 Slc22a1-201ENSMUST00000024596 1994 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Hdac1O09106 B4galt3-201ENSMUST00000064272 1998 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Hdac1O09106 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC19.32■□□□□ 0.68
Hdac1O09106 Sema6b-201ENSMUST00000001256 3736 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Hdac1O09106 Kbtbd2-201ENSMUST00000114321 3868 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Hdac1O09106 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
Hdac1O09106 Tex19.2-201ENSMUST00000039146 2046 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Hdac1O09106 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Hdac1O09106 Tpsg1-202ENSMUST00000160377 1040 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Hdac1O09106 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Hdac1O09106 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Hdac1O09106 Pacsin1-203ENSMUST00000114872 1647 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
Hdac1O09106 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC19.31■□□□□ 0.68
Hdac1O09106 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC19.31■□□□□ 0.68
Hdac1O09106 Impdh1-205ENSMUST00000160878 2314 ntTSL 5 BASIC19.31■□□□□ 0.68
Hdac1O09106 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
Hdac1O09106 Tmem176a-201ENSMUST00000101426 1540 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Hdac1O09106 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC19.3■□□□□ 0.68
Hdac1O09106 Keap1-201ENSMUST00000049567 3172 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
Hdac1O09106 Adamts19-201ENSMUST00000052907 4666 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 23.6 ms