Protein–RNA interactions for Protein: O08983

Hps1, Hermansky-Pudlak syndrome 1 protein homolog, mousemouse

Predictions only

Length 704 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hps1O08983 Rapgef3-207ENSMUST00000134885 1422 ntTSL 5 BASIC15.12■□□□□ 0.01
Hps1O08983 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Hps1O08983 Gm12382-201ENSMUST00000122005 922 ntBASIC15.12■□□□□ 0.01
Hps1O08983 Gm18959-201ENSMUST00000208954 655 ntBASIC15.12■□□□□ 0.01
Hps1O08983 Gm18025-201ENSMUST00000221733 862 ntBASIC15.12■□□□□ 0.01
Hps1O08983 Ppic-201ENSMUST00000025419 1286 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Hps1O08983 Prss40-201ENSMUST00000047840 1275 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Hps1O08983 4930465K10Rik-201ENSMUST00000056675 1238 ntBASIC15.12■□□□□ 0.01
Hps1O08983 Cebpg-201ENSMUST00000070191 914 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
Hps1O08983 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Hps1O08983 Nlk-201ENSMUST00000142739 4444 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
Hps1O08983 Pitx2-201ENSMUST00000029657 1680 ntTSL 5 BASIC15.12■□□□□ 0.01
Hps1O08983 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
Hps1O08983 Taf6l-201ENSMUST00000003777 1869 ntTSL 5 BASIC15.12■□□□□ 0.01
Hps1O08983 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
Hps1O08983 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC15.12■□□□□ 0.01
Hps1O08983 Hps6-201ENSMUST00000099393 2696 ntAPPRIS P1 BASIC15.11■□□□□ 0.01
Hps1O08983 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Hps1O08983 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Hps1O08983 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Hps1O08983 P3h1-203ENSMUST00000102662 2977 ntAPPRIS P3 TSL 5 BASIC15.11■□□□□ 0.01
Hps1O08983 Sept10-203ENSMUST00000220156 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Hps1O08983 Rnf139-201ENSMUST00000036904 4348 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Hps1O08983 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Hps1O08983 Sntb2-201ENSMUST00000047425 3225 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Hps1O08983 Syt8-202ENSMUST00000105976 1289 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Hps1O08983 Gm10013-201ENSMUST00000106074 672 ntBASIC15.11■□□□□ 0.01
Hps1O08983 Ctnnal1-202ENSMUST00000107612 850 ntTSL 3 BASIC15.11■□□□□ 0.01
Hps1O08983 Gm14859-201ENSMUST00000117752 357 ntBASIC15.11■□□□□ 0.01
Hps1O08983 Syt8-205ENSMUST00000122393 1291 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Hps1O08983 Gm23634-201ENSMUST00000175071 91 ntBASIC15.11■□□□□ 0.01
Hps1O08983 Gm3764-202ENSMUST00000180582 440 ntTSL 5 BASIC15.11■□□□□ 0.01
Hps1O08983 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC15.11■□□□□ 0.01
Hps1O08983 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC15.11■□□□□ 0.01
Hps1O08983 Thap3-201ENSMUST00000036680 1124 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Hps1O08983 Prss27-201ENSMUST00000059482 1253 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Hps1O08983 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Hps1O08983 Adat2-201ENSMUST00000019944 1466 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Hps1O08983 Acads-201ENSMUST00000031524 1870 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Hps1O08983 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Hps1O08983 Etl4-208ENSMUST00000114614 5898 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Hps1O08983 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Hps1O08983 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC15.11■□□□□ 0.01
Hps1O08983 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Hps1O08983 Prps1l3-201ENSMUST00000139049 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Hps1O08983 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Hps1O08983 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Hps1O08983 Kri1-201ENSMUST00000038671 2598 ntAPPRIS P2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Hps1O08983 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC15.11■□□□□ 0.01
Hps1O08983 Aldh2-202ENSMUST00000129753 1799 ntTSL 1 (best) BASIC15.11■□□□□ 0.01
Hps1O08983 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC15.11■□□□□ 0.01
Hps1O08983 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Hps1O08983 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Hps1O08983 Nr1h2-204ENSMUST00000107912 1839 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Hps1O08983 Lrch1-205ENSMUST00000228252 3125 ntAPPRIS ALT2 BASIC15.1■□□□□ 0.01
Hps1O08983 Rbm26-203ENSMUST00000163499 4212 ntTSL 1 (best) BASIC15.1■□□□□ 0.01
Hps1O08983 Fiz1-201ENSMUST00000077385 2546 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Hps1O08983 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Hps1O08983 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Hps1O08983 Gm45560-201ENSMUST00000211492 1472 ntBASIC15.1■□□□□ 0.01
Hps1O08983 Faap20-201ENSMUST00000097747 1479 ntAPPRIS ALT2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Hps1O08983 Plxdc1-202ENSMUST00000107564 619 ntTSL 2 BASIC15.1■□□□□ 0.01
Hps1O08983 AA414768-201ENSMUST00000121924 1257 ntBASIC15.1■□□□□ 0.01
Hps1O08983 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC15.1■□□□□ 0.01
Hps1O08983 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Hps1O08983 Izumo2-201ENSMUST00000085422 632 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Hps1O08983 Hist1h2aj-201ENSMUST00000091710 352 ntBASIC15.1■□□□□ 0.01
Hps1O08983 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Hps1O08983 Sppl3-201ENSMUST00000031530 3204 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Hps1O08983 Trappc5-201ENSMUST00000044857 2546 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Hps1O08983 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Hps1O08983 Med7-209ENSMUST00000170928 2390 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Hps1O08983 Vrk2-201ENSMUST00000078362 1889 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.01
Hps1O08983 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Hps1O08983 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC15.1■□□□□ 0.01
Hps1O08983 Sox13-205ENSMUST00000153799 3693 ntAPPRIS P2 TSL 1 (best) BASIC15.1■□□□□ 0.01
Hps1O08983 Lhfp-203ENSMUST00000147139 1932 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
Hps1O08983 Gata5os-201ENSMUST00000069943 1678 ntTSL 2 BASIC15.09■□□□□ 0.01
Hps1O08983 Mbp-201ENSMUST00000047865 2492 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Hps1O08983 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Hps1O08983 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Hps1O08983 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Hps1O08983 Phgr1-202ENSMUST00000130293 542 ntAPPRIS P2 TSL 5 BASIC15.09■□□□□ 0.01
Hps1O08983 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC15.09■□□□□ 0.01
Hps1O08983 Gm42545-201ENSMUST00000202755 922 ntBASIC15.09■□□□□ 0.01
Hps1O08983 Flywch2-201ENSMUST00000024704 694 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Hps1O08983 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Hps1O08983 Cap1-202ENSMUST00000106255 2737 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Hps1O08983 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Hps1O08983 Emilin3-202ENSMUST00000109454 3396 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
Hps1O08983 Trappc3-201ENSMUST00000030660 1336 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Hps1O08983 Gm8839-201ENSMUST00000121279 1645 ntBASIC15.09■□□□□ 0.01
Hps1O08983 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Hps1O08983 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Hps1O08983 Zkscan14-201ENSMUST00000031632 1967 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Hps1O08983 Acot7-203ENSMUST00000105652 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
Hps1O08983 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC15.09■□□□□ 0.01
Hps1O08983 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
Hps1O08983 Tspan9-201ENSMUST00000032503 1405 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
Hps1O08983 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC15.08■□□□□ 0.01
Retrieved 100 of 76,532 protein–RNA pairs in 22.5 ms