Protein–RNA interactions for Protein: O08791

Ebf3, Transcription factor COE3, mousemouse

Predictions only

Length 596 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ebf3O08791 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ebf3O08791 Tfap2a-209ENSMUST00000225180 1828 ntBASIC16.84■□□□□ 0.29
Ebf3O08791 Mcfd2-201ENSMUST00000024963 1823 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ebf3O08791 Arhgef25-212ENSMUST00000222006 1896 ntTSL 5 BASIC16.84■□□□□ 0.29
Ebf3O08791 F12-201ENSMUST00000021948 1960 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ebf3O08791 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC16.84■□□□□ 0.29
Ebf3O08791 Pitpnm1-201ENSMUST00000049658 4206 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ebf3O08791 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC16.84■□□□□ 0.29
Ebf3O08791 Arhgef9-216ENSMUST00000197206 2227 ntTSL 5 BASIC16.84■□□□□ 0.29
Ebf3O08791 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC16.84■□□□□ 0.29
Ebf3O08791 Dlgap4-205ENSMUST00000109567 4840 ntAPPRIS ALT2 TSL 5 BASIC16.84■□□□□ 0.29
Ebf3O08791 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.29
Ebf3O08791 Larp4b-201ENSMUST00000091829 5720 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
Ebf3O08791 Gprin1-202ENSMUST00000135343 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ebf3O08791 Tbx21-201ENSMUST00000001484 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ebf3O08791 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
Ebf3O08791 Gm26549-201ENSMUST00000181112 1209 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Ebf3O08791 1700001G17Rik-201ENSMUST00000191779 889 ntBASIC16.83■□□□□ 0.28
Ebf3O08791 Ogfod2-207ENSMUST00000196627 532 ntTSL 3 BASIC16.83■□□□□ 0.28
Ebf3O08791 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ebf3O08791 Gm45890-204ENSMUST00000212356 545 ntTSL 2 BASIC16.83■□□□□ 0.28
Ebf3O08791 Zbtb24-202ENSMUST00000213797 2734 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
Ebf3O08791 AC161829.1-201ENSMUST00000220298 281 ntBASIC16.83■□□□□ 0.28
Ebf3O08791 Fcnb-201ENSMUST00000028179 1170 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ebf3O08791 Rab35-201ENSMUST00000031492 2820 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ebf3O08791 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ebf3O08791 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ebf3O08791 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ebf3O08791 Sybu-202ENSMUST00000110267 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ebf3O08791 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC16.83■□□□□ 0.28
Ebf3O08791 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
Ebf3O08791 Rbpms-201ENSMUST00000033994 2375 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Ebf3O08791 St3gal3-203ENSMUST00000106410 2225 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ebf3O08791 Gopc-202ENSMUST00000105475 4317 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Ebf3O08791 AL590614.2-201ENSMUST00000225374 1937 ntBASIC16.82■□□□□ 0.28
Ebf3O08791 Lcorl-202ENSMUST00000045586 5708 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Ebf3O08791 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ebf3O08791 Crocc-203ENSMUST00000102491 6582 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ebf3O08791 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ebf3O08791 Matr3-214ENSMUST00000190029 2845 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
Ebf3O08791 Gm15165-201ENSMUST00000118140 502 ntBASIC16.82■□□□□ 0.28
Ebf3O08791 Kctd14-202ENSMUST00000121987 1210 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Ebf3O08791 Gm13830-201ENSMUST00000124378 417 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Ebf3O08791 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
Ebf3O08791 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC16.82■□□□□ 0.28
Ebf3O08791 Gm44430-201ENSMUST00000203376 995 ntBASIC16.82■□□□□ 0.28
Ebf3O08791 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC16.82■□□□□ 0.28
Ebf3O08791 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Ebf3O08791 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ebf3O08791 Hap1-201ENSMUST00000103124 2120 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ebf3O08791 Gpr150-201ENSMUST00000056130 2146 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
Ebf3O08791 Car9-201ENSMUST00000030183 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ebf3O08791 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ebf3O08791 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ebf3O08791 Slc38a10-202ENSMUST00000053692 1947 ntAPPRIS ALT2 TSL 1 (best) BASIC16.82■□□□□ 0.28
Ebf3O08791 Ano8-204ENSMUST00000213382 3785 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
Ebf3O08791 Gm45203-201ENSMUST00000206384 1831 ntBASIC16.82■□□□□ 0.28
Ebf3O08791 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Ebf3O08791 Arrdc1-201ENSMUST00000028349 1666 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ebf3O08791 Igsf8-201ENSMUST00000039506 2278 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ebf3O08791 Acap3-201ENSMUST00000079031 4301 ntTSL 5 BASIC16.81■□□□□ 0.28
Ebf3O08791 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Ebf3O08791 Esrp1-202ENSMUST00000108310 2781 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
Ebf3O08791 Gm16401-202ENSMUST00000197463 2074 ntBASIC16.81■□□□□ 0.28
Ebf3O08791 Mid1ip1-201ENSMUST00000008179 2019 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ebf3O08791 Fiz1-203ENSMUST00000167804 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ebf3O08791 Hint3-203ENSMUST00000161074 875 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ebf3O08791 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC16.81■□□□□ 0.28
Ebf3O08791 Gm9449-201ENSMUST00000207265 1011 ntBASIC16.81■□□□□ 0.28
Ebf3O08791 Gm6376-201ENSMUST00000209407 580 ntBASIC16.81■□□□□ 0.28
Ebf3O08791 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ebf3O08791 Cd300c-201ENSMUST00000061637 690 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
Ebf3O08791 Cd300c-202ENSMUST00000092466 700 ntAPPRIS P5 TSL 5 BASIC16.81■□□□□ 0.28
Ebf3O08791 Fam110a-204ENSMUST00000109865 1853 ntAPPRIS P1 TSL 2 BASIC16.81■□□□□ 0.28
Ebf3O08791 Ankra2-203ENSMUST00000123924 2328 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Ebf3O08791 Asic2-201ENSMUST00000021045 3436 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Ebf3O08791 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Ebf3O08791 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Ebf3O08791 Fmnl3-202ENSMUST00000088233 4423 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ebf3O08791 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ebf3O08791 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
Ebf3O08791 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
Ebf3O08791 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ebf3O08791 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC16.8■□□□□ 0.28
Ebf3O08791 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ebf3O08791 4930474N05Rik-203ENSMUST00000226305 2313 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Ebf3O08791 Zfp691-201ENSMUST00000052715 2341 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ebf3O08791 Adam22-201ENSMUST00000046838 2773 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ebf3O08791 Trim8-201ENSMUST00000026008 3230 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ebf3O08791 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ebf3O08791 Eefsec-201ENSMUST00000165242 2679 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ebf3O08791 Hif3a-201ENSMUST00000037762 2206 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
Ebf3O08791 Gm16499-203ENSMUST00000204633 2177 ntBASIC16.8■□□□□ 0.28
Ebf3O08791 Gm44454-201ENSMUST00000198541 138 ntBASIC16.8■□□□□ 0.28
Ebf3O08791 Gm2651-201ENSMUST00000203560 838 ntBASIC16.8■□□□□ 0.28
Ebf3O08791 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
Ebf3O08791 Gm18206-201ENSMUST00000207027 926 ntBASIC16.8■□□□□ 0.28
Ebf3O08791 Gm38948-201ENSMUST00000210035 688 ntTSL 3 BASIC16.8■□□□□ 0.28
Ebf3O08791 Olfr601-201ENSMUST00000080474 990 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
Ebf3O08791 Pde8b-208ENSMUST00000162292 4235 ntAPPRIS P2 TSL 1 (best) BASIC16.8■□□□□ 0.28
Retrieved 100 of 76,532 protein–RNA pairs in 43.2 ms