Protein–RNA interactions for Protein: O08740

Polr2j, DNA-directed RNA polymerase II subunit RPB11, mousemouse

Known RBP Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Polr2jO08740 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
Polr2jO08740 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
Polr2jO08740 Chaf1b-201ENSMUST00000023666 1922 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Polr2jO08740 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Polr2jO08740 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
Polr2jO08740 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC15.6■□□□□ 0.09
Polr2jO08740 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC15.6■□□□□ 0.09
Polr2jO08740 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Polr2jO08740 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Polr2jO08740 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Polr2jO08740 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Polr2jO08740 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Polr2jO08740 Sqstm1-205ENSMUST00000143379 1266 ntTSL 5 BASIC15.6■□□□□ 0.09
Polr2jO08740 Lamtor5-201ENSMUST00000145735 881 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
Polr2jO08740 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC15.6■□□□□ 0.09
Polr2jO08740 Gm18115-201ENSMUST00000221209 621 ntBASIC15.6■□□□□ 0.09
Polr2jO08740 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Polr2jO08740 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Polr2jO08740 Sfmbt1-201ENSMUST00000054230 7837 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
Polr2jO08740 Bhlhe41-201ENSMUST00000032386 6133 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Polr2jO08740 Zfp264-201ENSMUST00000208656 1563 ntBASIC15.6■□□□□ 0.09
Polr2jO08740 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Polr2jO08740 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC15.6■□□□□ 0.09
Polr2jO08740 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Polr2jO08740 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Polr2jO08740 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Polr2jO08740 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
Polr2jO08740 Trim14-201ENSMUST00000046897 1429 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
Polr2jO08740 Prss54-201ENSMUST00000052690 1438 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
Polr2jO08740 A4galt-201ENSMUST00000049530 2088 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Polr2jO08740 AC153526.5-201ENSMUST00000218661 2147 ntBASIC15.59■□□□□ 0.09
Polr2jO08740 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
Polr2jO08740 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Polr2jO08740 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Polr2jO08740 6430548M08Rik-201ENSMUST00000034281 5564 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
Polr2jO08740 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Polr2jO08740 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Polr2jO08740 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Polr2jO08740 Ankrd44-201ENSMUST00000044359 6192 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
Polr2jO08740 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Polr2jO08740 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Polr2jO08740 Hs3st5-203ENSMUST00000168572 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Polr2jO08740 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Polr2jO08740 Gm13168-201ENSMUST00000121771 632 ntBASIC15.59■□□□□ 0.09
Polr2jO08740 Gm14114-201ENSMUST00000139345 287 ntTSL 3 BASIC15.59■□□□□ 0.09
Polr2jO08740 Gm5091-201ENSMUST00000181658 1179 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
Polr2jO08740 2310033P09Rik-201ENSMUST00000020719 1285 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Polr2jO08740 CT025689.6-201ENSMUST00000224991 1104 ntBASIC15.59■□□□□ 0.09
Polr2jO08740 Polr2f-201ENSMUST00000040077 543 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Polr2jO08740 Prmt1-201ENSMUST00000045325 1071 ntTSL 5 BASIC15.59■□□□□ 0.09
Polr2jO08740 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
Polr2jO08740 Shank1-201ENSMUST00000107934 6477 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
Polr2jO08740 Atp8b2-210ENSMUST00000168276 4265 ntAPPRIS P2 TSL 5 BASIC15.59■□□□□ 0.09
Polr2jO08740 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Polr2jO08740 Celf1-206ENSMUST00000111451 4678 ntAPPRIS ALT1 TSL 5 BASIC15.59■□□□□ 0.09
Polr2jO08740 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Polr2jO08740 Mapk8ip2-201ENSMUST00000023291 5558 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Polr2jO08740 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
Polr2jO08740 Slc35b2-202ENSMUST00000223987 1766 ntBASIC15.59■□□□□ 0.09
Polr2jO08740 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC15.59■□□□□ 0.09
Polr2jO08740 Trim50-201ENSMUST00000065785 1803 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
Polr2jO08740 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC15.59■□□□□ 0.09
Polr2jO08740 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC15.58■□□□□ 0.09
Polr2jO08740 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC15.58■□□□□ 0.09
Polr2jO08740 Vps51-201ENSMUST00000025711 2489 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Polr2jO08740 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.09
Polr2jO08740 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Polr2jO08740 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Polr2jO08740 Gm42473-201ENSMUST00000201056 2291 ntBASIC15.58■□□□□ 0.08
Polr2jO08740 Ppm1e-201ENSMUST00000055438 6344 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Polr2jO08740 Acot8-202ENSMUST00000103094 1152 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Polr2jO08740 Gusb-202ENSMUST00000111307 932 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Polr2jO08740 Tpm1-208ENSMUST00000113689 904 ntTSL 5 BASIC15.58■□□□□ 0.08
Polr2jO08740 Gm715-201ENSMUST00000117865 831 ntBASIC15.58■□□□□ 0.08
Polr2jO08740 Gm14464-201ENSMUST00000119658 1254 ntBASIC15.58■□□□□ 0.08
Polr2jO08740 Pgap3-205ENSMUST00000128897 1264 ntTSL 5 BASIC15.58■□□□□ 0.08
Polr2jO08740 Acot8-201ENSMUST00000017451 1055 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Polr2jO08740 Gm27463-201ENSMUST00000183569 57 ntBASIC15.58■□□□□ 0.08
Polr2jO08740 Arhgef4-208ENSMUST00000211073 171 ntBASIC15.58■□□□□ 0.08
Polr2jO08740 Ppp3cb-206ENSMUST00000161989 2322 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Polr2jO08740 1190002N15Rik-201ENSMUST00000113028 3950 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Polr2jO08740 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC15.58■□□□□ 0.08
Polr2jO08740 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC15.58■□□□□ 0.08
Polr2jO08740 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC15.58■□□□□ 0.08
Polr2jO08740 App-203ENSMUST00000226801 3299 ntAPPRIS ALT2 BASIC15.58■□□□□ 0.08
Polr2jO08740 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC15.58■□□□□ 0.08
Polr2jO08740 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Polr2jO08740 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC15.58■□□□□ 0.08
Polr2jO08740 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC15.58■□□□□ 0.08
Polr2jO08740 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC15.58■□□□□ 0.08
Polr2jO08740 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Polr2jO08740 Lrch3-210ENSMUST00000170201 2902 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Polr2jO08740 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC15.57■□□□□ 0.08
Polr2jO08740 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Polr2jO08740 Ruvbl2-205ENSMUST00000211214 2312 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Polr2jO08740 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC15.57■□□□□ 0.08
Polr2jO08740 4931440P22Rik-202ENSMUST00000147424 2430 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Polr2jO08740 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Polr2jO08740 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC15.57■□□□□ 0.08
Polr2jO08740 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC15.57■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 19.6 ms