Protein–RNA interactions for Protein: J3QNX5

Shisa8, Cysteine-knot AMPAR-modulating protein 39, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shisa8J3QNX5 Mapk9-205ENSMUST00000109179 4682 ntTSL 5 BASIC14.87□□□□□ -0.03
Shisa8J3QNX5 Mapk9-209ENSMUST00000164643 4682 ntTSL 5 BASIC14.87□□□□□ -0.03
Shisa8J3QNX5 Pitpna-203ENSMUST00000143219 3761 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Shisa8J3QNX5 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Shisa8J3QNX5 Mief1-202ENSMUST00000166030 2712 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Shisa8J3QNX5 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC14.87□□□□□ -0.03
Shisa8J3QNX5 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Shisa8J3QNX5 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Shisa8J3QNX5 Erich2-203ENSMUST00000134607 1659 ntAPPRIS ALT2 TSL 5 BASIC14.87□□□□□ -0.03
Shisa8J3QNX5 6430548M08Rik-204ENSMUST00000108951 5531 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Shisa8J3QNX5 Plcl1-201ENSMUST00000042986 6580 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Shisa8J3QNX5 Cdk9-202ENSMUST00000120105 1565 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Shisa8J3QNX5 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Shisa8J3QNX5 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Shisa8J3QNX5 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
Shisa8J3QNX5 Trhde-201ENSMUST00000061632 5714 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Shisa8J3QNX5 Gm16764-202ENSMUST00000148931 433 ntTSL 5 BASIC14.87□□□□□ -0.03
Shisa8J3QNX5 Gm18958-201ENSMUST00000174258 762 ntBASIC14.87□□□□□ -0.03
Shisa8J3QNX5 Gm20049-201ENSMUST00000219950 730 ntBASIC14.87□□□□□ -0.03
Shisa8J3QNX5 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Shisa8J3QNX5 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Shisa8J3QNX5 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Shisa8J3QNX5 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Shisa8J3QNX5 Dusp14-205ENSMUST00000164891 1454 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Shisa8J3QNX5 Pcsk6-201ENSMUST00000055576 4405 ntAPPRIS P3 TSL 5 BASIC14.87□□□□□ -0.03
Shisa8J3QNX5 St7l-211ENSMUST00000200132 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
Shisa8J3QNX5 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Shisa8J3QNX5 Dbndd1-202ENSMUST00000176286 1344 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Shisa8J3QNX5 Akap7-203ENSMUST00000100012 2321 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Shisa8J3QNX5 Dact1-201ENSMUST00000061273 3650 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
Shisa8J3QNX5 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Shisa8J3QNX5 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
Shisa8J3QNX5 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Shisa8J3QNX5 Pex16-201ENSMUST00000028650 1392 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Shisa8J3QNX5 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Shisa8J3QNX5 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Shisa8J3QNX5 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Shisa8J3QNX5 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Shisa8J3QNX5 Gm42473-201ENSMUST00000201056 2291 ntBASIC14.86□□□□□ -0.03
Shisa8J3QNX5 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
Shisa8J3QNX5 Gm29340-201ENSMUST00000188763 3854 ntBASIC14.86□□□□□ -0.03
Shisa8J3QNX5 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Shisa8J3QNX5 Itgb4-201ENSMUST00000021107 6014 ntAPPRIS P2 TSL 5 BASIC14.86□□□□□ -0.03
Shisa8J3QNX5 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Shisa8J3QNX5 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC14.86□□□□□ -0.03
Shisa8J3QNX5 Ssu72-202ENSMUST00000105595 874 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
Shisa8J3QNX5 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Shisa8J3QNX5 Smim1-209ENSMUST00000145527 562 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
Shisa8J3QNX5 Sae1-203ENSMUST00000210999 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Shisa8J3QNX5 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Shisa8J3QNX5 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Shisa8J3QNX5 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
Shisa8J3QNX5 Mbip-201ENSMUST00000021416 1512 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
Shisa8J3QNX5 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
Shisa8J3QNX5 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC14.86□□□□□ -0.03
Shisa8J3QNX5 AC124581.1-201ENSMUST00000225416 1399 ntBASIC14.85□□□□□ -0.03
Shisa8J3QNX5 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC14.85□□□□□ -0.03
Shisa8J3QNX5 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Shisa8J3QNX5 Sgpp1-202ENSMUST00000220285 3200 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Shisa8J3QNX5 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Shisa8J3QNX5 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC14.85□□□□□ -0.03
Shisa8J3QNX5 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Shisa8J3QNX5 I0C0044D17Rik-201ENSMUST00000097964 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Shisa8J3QNX5 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Shisa8J3QNX5 Ndufaf3-201ENSMUST00000074208 1487 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Shisa8J3QNX5 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
Shisa8J3QNX5 Mrpl13-205ENSMUST00000172387 1223 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Shisa8J3QNX5 Gm18666-201ENSMUST00000190039 958 ntBASIC14.85□□□□□ -0.03
Shisa8J3QNX5 Tpgs1-201ENSMUST00000020552 1143 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Shisa8J3QNX5 Ltb-201ENSMUST00000025262 1160 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Shisa8J3QNX5 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Shisa8J3QNX5 4933402J07Rik-201ENSMUST00000093342 1304 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Shisa8J3QNX5 Fam110a-201ENSMUST00000062047 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Shisa8J3QNX5 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
Shisa8J3QNX5 Zpbp2-203ENSMUST00000107509 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
Shisa8J3QNX5 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
Shisa8J3QNX5 Ggt6-202ENSMUST00000100903 1387 ntTSL 5 BASIC14.85□□□□□ -0.03
Shisa8J3QNX5 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Shisa8J3QNX5 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Shisa8J3QNX5 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Shisa8J3QNX5 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Shisa8J3QNX5 St8sia1-201ENSMUST00000032421 8991 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Shisa8J3QNX5 Esr1-203ENSMUST00000105589 2612 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Shisa8J3QNX5 Lncpint-201ENSMUST00000115107 1676 ntTSL 5 BASIC14.84□□□□□ -0.03
Shisa8J3QNX5 Gja4-201ENSMUST00000053753 1685 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Shisa8J3QNX5 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Shisa8J3QNX5 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Shisa8J3QNX5 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC14.84□□□□□ -0.03
Shisa8J3QNX5 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Shisa8J3QNX5 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
Shisa8J3QNX5 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Shisa8J3QNX5 Cd151-203ENSMUST00000177840 1708 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
Shisa8J3QNX5 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC14.84□□□□□ -0.03
Shisa8J3QNX5 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC14.84□□□□□ -0.03
Shisa8J3QNX5 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Shisa8J3QNX5 Spata33-206ENSMUST00000212637 569 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
Shisa8J3QNX5 Thrsp-201ENSMUST00000043077 1277 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Shisa8J3QNX5 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Shisa8J3QNX5 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
Shisa8J3QNX5 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
Retrieved 100 of 76,532 protein–RNA pairs in 27.1 ms