Protein–RNA interactions for Protein: J3QMG8

Trav13d-3, T cell receptor alpha variable 13D-3 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-3J3QMG8 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Trav13d-3J3QMG8 Dnajc3-201ENSMUST00000022734 5141 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav13d-3J3QMG8 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav13d-3J3QMG8 Shq1-202ENSMUST00000113312 6816 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav13d-3J3QMG8 Gm13283-201ENSMUST00000191112 1463 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Trav13d-3J3QMG8 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Trav13d-3J3QMG8 Gpd1-203ENSMUST00000162194 1515 ntTSL 5 BASIC14.31□□□□□ -0.12
Trav13d-3J3QMG8 Dnm2-204ENSMUST00000165766 3063 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Trav13d-3J3QMG8 2810410L24Rik-202ENSMUST00000155681 2615 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Trav13d-3J3QMG8 Gm16759-204ENSMUST00000191455 4272 ntTSL 5 BASIC14.3□□□□□ -0.12
Trav13d-3J3QMG8 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav13d-3J3QMG8 Dok3-202ENSMUST00000223563 1644 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Trav13d-3J3QMG8 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav13d-3J3QMG8 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav13d-3J3QMG8 Ntn1-202ENSMUST00000108674 5874 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Trav13d-3J3QMG8 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav13d-3J3QMG8 Kcng4-202ENSMUST00000164382 1875 ntAPPRIS P1 TSL 5 BASIC14.3□□□□□ -0.12
Trav13d-3J3QMG8 Apoa5-202ENSMUST00000121598 2515 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav13d-3J3QMG8 Spint2-202ENSMUST00000108236 1211 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Trav13d-3J3QMG8 Zfp629-206ENSMUST00000132524 215 ntTSL 5 BASIC14.3□□□□□ -0.12
Trav13d-3J3QMG8 Gm23634-201ENSMUST00000175071 91 ntBASIC14.3□□□□□ -0.12
Trav13d-3J3QMG8 Gm38186-201ENSMUST00000192574 449 ntTSL 3 BASIC14.3□□□□□ -0.12
Trav13d-3J3QMG8 Arl5b-206ENSMUST00000193836 481 ntTSL 2 BASIC14.3□□□□□ -0.12
Trav13d-3J3QMG8 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav13d-3J3QMG8 Ewsr1-204ENSMUST00000093365 1290 ntTSL 5 BASIC14.3□□□□□ -0.12
Trav13d-3J3QMG8 Mettl21a-202ENSMUST00000114079 2030 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav13d-3J3QMG8 Anp32a-201ENSMUST00000085519 2113 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav13d-3J3QMG8 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav13d-3J3QMG8 Bud23-202ENSMUST00000085984 1516 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav13d-3J3QMG8 Arl4c-202ENSMUST00000159814 3997 ntAPPRIS P1 BASIC14.3□□□□□ -0.12
Trav13d-3J3QMG8 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Trav13d-3J3QMG8 Inpp5f-201ENSMUST00000043138 4734 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav13d-3J3QMG8 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav13d-3J3QMG8 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Trav13d-3J3QMG8 Sik3-204ENSMUST00000126865 6287 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav13d-3J3QMG8 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
Trav13d-3J3QMG8 Sgsm2-202ENSMUST00000081799 4873 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Trav13d-3J3QMG8 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav13d-3J3QMG8 Gm15690-201ENSMUST00000128728 432 ntTSL 3 BASIC14.29□□□□□ -0.12
Trav13d-3J3QMG8 Prm2-201ENSMUST00000037996 621 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav13d-3J3QMG8 Grcc10-201ENSMUST00000004389 863 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav13d-3J3QMG8 Rpl21-202ENSMUST00000075453 899 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav13d-3J3QMG8 Derl3-201ENSMUST00000009236 1321 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav13d-3J3QMG8 Anapc5-201ENSMUST00000086216 2760 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav13d-3J3QMG8 Gm32996-201ENSMUST00000199828 1447 ntBASIC14.29□□□□□ -0.12
Trav13d-3J3QMG8 Tmem254b-201ENSMUST00000022418 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav13d-3J3QMG8 Snrpd2-201ENSMUST00000049294 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav13d-3J3QMG8 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav13d-3J3QMG8 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
Trav13d-3J3QMG8 Xrcc1-205ENSMUST00000205573 2528 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav13d-3J3QMG8 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
Trav13d-3J3QMG8 Taf5l-201ENSMUST00000093039 2912 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav13d-3J3QMG8 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav13d-3J3QMG8 Psmd12-203ENSMUST00000106752 1955 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Trav13d-3J3QMG8 Tm6sf2-202ENSMUST00000110160 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav13d-3J3QMG8 H2-DMb1-201ENSMUST00000114232 1404 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav13d-3J3QMG8 Ube2j2-213ENSMUST00000166489 3339 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav13d-3J3QMG8 Gm10052-201ENSMUST00000168019 960 ntBASIC14.28□□□□□ -0.12
Trav13d-3J3QMG8 Gm6728-201ENSMUST00000178117 1065 ntBASIC14.28□□□□□ -0.12
Trav13d-3J3QMG8 Gm26644-201ENSMUST00000181365 958 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Trav13d-3J3QMG8 Gm43072-201ENSMUST00000200283 1671 ntBASIC14.28□□□□□ -0.12
Trav13d-3J3QMG8 Flt3l-206ENSMUST00000210197 834 ntAPPRIS ALT2 TSL 5 BASIC14.28□□□□□ -0.12
Trav13d-3J3QMG8 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC14.28□□□□□ -0.12
Trav13d-3J3QMG8 AC158538.1-201ENSMUST00000225870 294 ntBASIC14.28□□□□□ -0.12
Trav13d-3J3QMG8 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav13d-3J3QMG8 Gm7729-201ENSMUST00000050143 801 ntBASIC14.28□□□□□ -0.12
Trav13d-3J3QMG8 B4galt7-201ENSMUST00000064701 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav13d-3J3QMG8 Syngap1-204ENSMUST00000194598 6011 ntAPPRIS P2 TSL 5 BASIC14.28□□□□□ -0.12
Trav13d-3J3QMG8 Adgrl1-205ENSMUST00000132500 5719 ntTSL 5 BASIC14.28□□□□□ -0.12
Trav13d-3J3QMG8 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Trav13d-3J3QMG8 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC14.28□□□□□ -0.12
Trav13d-3J3QMG8 App-201ENSMUST00000005406 3176 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav13d-3J3QMG8 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC14.28□□□□□ -0.12
Trav13d-3J3QMG8 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Trav13d-3J3QMG8 Tle3-211ENSMUST00000161689 2836 ntTSL 2 BASIC14.28□□□□□ -0.12
Trav13d-3J3QMG8 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
Trav13d-3J3QMG8 Fars2-201ENSMUST00000021857 2125 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trav13d-3J3QMG8 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Trav13d-3J3QMG8 Mxd4-201ENSMUST00000042701 3872 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trav13d-3J3QMG8 Fam126a-201ENSMUST00000030849 5659 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trav13d-3J3QMG8 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trav13d-3J3QMG8 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trav13d-3J3QMG8 Atp6v1b1-206ENSMUST00000206911 1591 ntTSL 1 (best) BASIC14.27□□□□□ -0.12
Trav13d-3J3QMG8 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.12
Trav13d-3J3QMG8 Tex261-201ENSMUST00000014892 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trav13d-3J3QMG8 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trav13d-3J3QMG8 Renbp-202ENSMUST00000116578 1418 ntAPPRIS P2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Trav13d-3J3QMG8 Snhg4-201ENSMUST00000181664 1190 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Trav13d-3J3QMG8 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav13d-3J3QMG8 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav13d-3J3QMG8 Taar2-201ENSMUST00000079134 1020 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav13d-3J3QMG8 Slc48a1-201ENSMUST00000117892 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav13d-3J3QMG8 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav13d-3J3QMG8 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC14.27□□□□□ -0.13
Trav13d-3J3QMG8 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav13d-3J3QMG8 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC14.27□□□□□ -0.13
Trav13d-3J3QMG8 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav13d-3J3QMG8 Gm26795-201ENSMUST00000180993 1952 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Trav13d-3J3QMG8 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Trav13d-3J3QMG8 Pofut1-204ENSMUST00000109794 1688 ntTSL 5 BASIC14.26□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 36.8 ms