Protein–RNA interactions for Protein: J3QK78

Gm3139, Predicted gene 3139, mousemouse

Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3139J3QK78 Hspa8-201ENSMUST00000015800 2394 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
Gm3139J3QK78 Cyfip2-205ENSMUST00000165599 6659 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Gm3139J3QK78 Abhd16a-201ENSMUST00000007251 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Gm3139J3QK78 Ppfibp1-201ENSMUST00000016631 4851 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Gm3139J3QK78 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Gm3139J3QK78 Rap2a-201ENSMUST00000062117 4191 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Gm3139J3QK78 Irgc1-204ENSMUST00000205776 1835 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Gm3139J3QK78 Gm6858-201ENSMUST00000208582 1468 ntBASIC16.17■□□□□ 0.18
Gm3139J3QK78 Akap8l-201ENSMUST00000050214 2075 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Gm3139J3QK78 Klf13-201ENSMUST00000063694 6396 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Gm3139J3QK78 Ybx2-202ENSMUST00000108601 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Gm3139J3QK78 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Gm3139J3QK78 Ankra2-204ENSMUST00000150352 2217 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Gm3139J3QK78 Atp5a1-201ENSMUST00000026495 2471 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Gm3139J3QK78 Eps8-203ENSMUST00000111878 3560 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Gm3139J3QK78 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Gm3139J3QK78 Edf1-201ENSMUST00000015236 722 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Gm3139J3QK78 Gm27867-201ENSMUST00000184778 125 ntBASIC16.17■□□□□ 0.18
Gm3139J3QK78 Icam4-202ENSMUST00000215077 1028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Gm3139J3QK78 AC127349.1-201ENSMUST00000224590 266 ntBASIC16.17■□□□□ 0.18
Gm3139J3QK78 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.18
Gm3139J3QK78 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Gm3139J3QK78 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
Gm3139J3QK78 Romo1-201ENSMUST00000088610 569 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Gm3139J3QK78 Hoxc9-201ENSMUST00000001706 2374 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Gm3139J3QK78 Shroom4-202ENSMUST00000103005 4839 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Gm3139J3QK78 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Gm3139J3QK78 Tatdn2-202ENSMUST00000113022 2416 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
Gm3139J3QK78 Cask-201ENSMUST00000033321 4057 ntTSL 5 BASIC16.17■□□□□ 0.18
Gm3139J3QK78 Ercc6l2-203ENSMUST00000067821 2743 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
Gm3139J3QK78 Cdk17-201ENSMUST00000069965 3615 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
Gm3139J3QK78 Olah-202ENSMUST00000115087 1479 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Gm3139J3QK78 Rhobtb1-202ENSMUST00000067908 4422 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Gm3139J3QK78 Eif2b5-201ENSMUST00000003320 3186 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Gm3139J3QK78 Krt6a-201ENSMUST00000023788 2256 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Gm3139J3QK78 Klhdc10-201ENSMUST00000068240 3951 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Gm3139J3QK78 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Gm3139J3QK78 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Gm3139J3QK78 Mef2d-203ENSMUST00000107559 1791 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Gm3139J3QK78 Trim7-201ENSMUST00000046903 2161 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Gm3139J3QK78 Pisd-201ENSMUST00000061895 2183 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Gm3139J3QK78 Apaf1-202ENSMUST00000159110 6433 ntAPPRIS P3 TSL 1 (best) BASIC16.16■□□□□ 0.18
Gm3139J3QK78 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Gm3139J3QK78 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
Gm3139J3QK78 Yif1b-203ENSMUST00000108238 1126 ntAPPRIS ALT2 TSL 1 (best) BASIC16.16■□□□□ 0.18
Gm3139J3QK78 Gm44264-201ENSMUST00000203049 742 ntTSL 3 BASIC16.16■□□□□ 0.18
Gm3139J3QK78 4931422A03Rik-201ENSMUST00000056170 1037 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Gm3139J3QK78 Rbm11-201ENSMUST00000046378 1400 ntAPPRIS P2 TSL 5 BASIC16.16■□□□□ 0.18
Gm3139J3QK78 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Gm3139J3QK78 Rala-201ENSMUST00000009003 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Gm3139J3QK78 Taok3-203ENSMUST00000111978 4467 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Gm3139J3QK78 Yipf2-204ENSMUST00000213809 1883 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Gm3139J3QK78 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
Gm3139J3QK78 Cmtm3-201ENSMUST00000034343 1616 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Gm3139J3QK78 Mis18bp1-208ENSMUST00000222244 2053 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Gm3139J3QK78 Bean1-204ENSMUST00000171018 3386 ntAPPRIS P4 TSL 1 (best) BASIC16.15■□□□□ 0.18
Gm3139J3QK78 Agpat3-203ENSMUST00000105388 3681 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Gm3139J3QK78 Dscr3-201ENSMUST00000023615 2547 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Gm3139J3QK78 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Gm3139J3QK78 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Gm3139J3QK78 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC16.15■□□□□ 0.18
Gm3139J3QK78 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC16.15■□□□□ 0.18
Gm3139J3QK78 Ivns1abp-203ENSMUST00000111887 2783 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Gm3139J3QK78 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC16.15■□□□□ 0.18
Gm3139J3QK78 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC16.15■□□□□ 0.18
Gm3139J3QK78 Mras-203ENSMUST00000122384 1122 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Gm3139J3QK78 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC16.15■□□□□ 0.18
Gm3139J3QK78 Gm43347-201ENSMUST00000200226 580 ntBASIC16.15■□□□□ 0.18
Gm3139J3QK78 Gtf3c2-202ENSMUST00000200871 318 ntTSL 3 BASIC16.15■□□□□ 0.18
Gm3139J3QK78 Arhgap33-206ENSMUST00000208522 781 ntTSL 3 BASIC16.15■□□□□ 0.18
Gm3139J3QK78 Brd3os-202ENSMUST00000209765 1898 ntAPPRIS P1 BASIC16.15■□□□□ 0.18
Gm3139J3QK78 Chga-201ENSMUST00000021610 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Gm3139J3QK78 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC16.15■□□□□ 0.18
Gm3139J3QK78 Camk2n1-201ENSMUST00000050918 4444 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Gm3139J3QK78 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Gm3139J3QK78 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC16.15■□□□□ 0.18
Gm3139J3QK78 Slc2a8-201ENSMUST00000028129 2108 ntAPPRIS P1 TSL 1 (best) BASIC16.15■□□□□ 0.18
Gm3139J3QK78 Slc25a2-201ENSMUST00000058635 1369 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Gm3139J3QK78 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC16.14■□□□□ 0.17
Gm3139J3QK78 9330151L19Rik-201ENSMUST00000181850 2545 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Gm3139J3QK78 Hist1h1c-201ENSMUST00000040914 1560 ntAPPRIS P1 BASIC16.14■□□□□ 0.17
Gm3139J3QK78 Fam171a2-201ENSMUST00000049057 3118 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Gm3139J3QK78 Gpr142-202ENSMUST00000106584 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Gm3139J3QK78 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Gm3139J3QK78 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC16.14■□□□□ 0.17
Gm3139J3QK78 Jpx-202ENSMUST00000182447 712 ntTSL 3 BASIC16.14■□□□□ 0.17
Gm3139J3QK78 Gm27459-201ENSMUST00000184860 107 ntBASIC16.14■□□□□ 0.17
Gm3139J3QK78 Ssr2-205ENSMUST00000193934 569 ntTSL 3 BASIC16.14■□□□□ 0.17
Gm3139J3QK78 3830406C13Rik-207ENSMUST00000223927 1010 ntBASIC16.14■□□□□ 0.17
Gm3139J3QK78 Psmg3-201ENSMUST00000031531 883 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Gm3139J3QK78 Gpr142-201ENSMUST00000045319 1098 ntAPPRIS P3 TSL 1 (best) BASIC16.14■□□□□ 0.17
Gm3139J3QK78 Dnase2a-202ENSMUST00000109744 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC16.14■□□□□ 0.17
Gm3139J3QK78 Zfp281-201ENSMUST00000047734 4933 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Gm3139J3QK78 Agpat1-201ENSMUST00000037489 2190 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Gm3139J3QK78 Slc35e3-201ENSMUST00000079041 3489 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Gm3139J3QK78 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Gm3139J3QK78 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Gm3139J3QK78 Zdhhc1-203ENSMUST00000212303 2056 ntAPPRIS P1 TSL 1 (best) BASIC16.14■□□□□ 0.17
Gm3139J3QK78 Rgs3-203ENSMUST00000098031 2072 ntAPPRIS ALT1 TSL 5 BASIC16.14■□□□□ 0.17
Gm3139J3QK78 Kcnq2-205ENSMUST00000103048 2827 ntTSL 1 (best) BASIC16.14■□□□□ 0.17
Retrieved 100 of 76,532 protein–RNA pairs in 41.2 ms