Protein–RNA interactions for Protein: J3KMR8

Gm17535, Predicted gene, 17535, mousemouse

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm17535J3KMR8 Cdv3-202ENSMUST00000072249 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
Gm17535J3KMR8 Mfsd4b1-201ENSMUST00000163705 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
Gm17535J3KMR8 Adss-201ENSMUST00000016105 2771 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Gm17535J3KMR8 Ube2i-207ENSMUST00000172868 2755 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Gm17535J3KMR8 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Gm17535J3KMR8 Phax-201ENSMUST00000008445 1942 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Gm17535J3KMR8 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Gm17535J3KMR8 Gid8-201ENSMUST00000029090 1655 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Gm17535J3KMR8 Chst13-201ENSMUST00000070890 1653 ntAPPRIS P1 TSL 3 BASIC17.23■□□□□ 0.35
Gm17535J3KMR8 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Gm17535J3KMR8 Amigo1-202ENSMUST00000106656 5482 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Gm17535J3KMR8 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Gm17535J3KMR8 Iqck-201ENSMUST00000098087 1503 ntAPPRIS ALT2 TSL 5 BASIC17.23■□□□□ 0.35
Gm17535J3KMR8 Mef2b-201ENSMUST00000110140 1223 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Gm17535J3KMR8 Mef2b-202ENSMUST00000110141 1253 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Gm17535J3KMR8 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC17.23■□□□□ 0.35
Gm17535J3KMR8 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC17.23■□□□□ 0.35
Gm17535J3KMR8 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
Gm17535J3KMR8 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Gm17535J3KMR8 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
Gm17535J3KMR8 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Gm17535J3KMR8 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Gm17535J3KMR8 Ppfia1-201ENSMUST00000168134 5181 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Gm17535J3KMR8 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
Gm17535J3KMR8 Zfp746-201ENSMUST00000073124 3651 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
Gm17535J3KMR8 Uri1-201ENSMUST00000085513 3441 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Gm17535J3KMR8 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
Gm17535J3KMR8 Slc35e1-202ENSMUST00000152080 4383 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Gm17535J3KMR8 Adnp2-201ENSMUST00000066743 5012 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Gm17535J3KMR8 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Gm17535J3KMR8 Runx1t1-201ENSMUST00000006761 5783 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Gm17535J3KMR8 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Gm17535J3KMR8 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Gm17535J3KMR8 9530018F02Rik-201ENSMUST00000219513 2599 ntBASIC17.22■□□□□ 0.35
Gm17535J3KMR8 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Gm17535J3KMR8 Sbf1-201ENSMUST00000123791 6190 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Gm17535J3KMR8 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Gm17535J3KMR8 Gm26661-201ENSMUST00000181025 471 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
Gm17535J3KMR8 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Gm17535J3KMR8 Timm8a2-201ENSMUST00000045976 913 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Gm17535J3KMR8 Rps4l-201ENSMUST00000071745 943 ntBASIC17.22■□□□□ 0.35
Gm17535J3KMR8 Scrt1-202ENSMUST00000164703 3478 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
Gm17535J3KMR8 Selenok-201ENSMUST00000112268 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Gm17535J3KMR8 Rassf8-203ENSMUST00000111704 5446 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
Gm17535J3KMR8 Dlgap4-212ENSMUST00000169464 4851 ntTSL 5 BASIC17.22■□□□□ 0.35
Gm17535J3KMR8 Sh3gl2-203ENSMUST00000107188 2286 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
Gm17535J3KMR8 Tsnax-201ENSMUST00000075896 2391 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Gm17535J3KMR8 B3gnt6-201ENSMUST00000098278 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Gm17535J3KMR8 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
Gm17535J3KMR8 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
Gm17535J3KMR8 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
Gm17535J3KMR8 Cyp26b1-203ENSMUST00000204109 1340 ntTSL 5 BASIC17.21■□□□□ 0.35
Gm17535J3KMR8 Ppif-201ENSMUST00000022419 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Gm17535J3KMR8 Tmem214-201ENSMUST00000114716 2220 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
Gm17535J3KMR8 Cwh43-201ENSMUST00000031040 2716 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Gm17535J3KMR8 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC17.21■□□□□ 0.35
Gm17535J3KMR8 A230103J11Rik-202ENSMUST00000156084 2086 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Gm17535J3KMR8 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC17.21■□□□□ 0.35
Gm17535J3KMR8 Lonrf1-201ENSMUST00000065297 3930 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
Gm17535J3KMR8 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
Gm17535J3KMR8 Gm4459-201ENSMUST00000118750 468 ntBASIC17.21■□□□□ 0.35
Gm17535J3KMR8 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC17.21■□□□□ 0.35
Gm17535J3KMR8 Gm9172-201ENSMUST00000212092 954 ntBASIC17.21■□□□□ 0.35
Gm17535J3KMR8 Rbfox2-207ENSMUST00000227533 1041 ntBASIC17.21■□□□□ 0.35
Gm17535J3KMR8 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Gm17535J3KMR8 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Gm17535J3KMR8 Gm17055-201ENSMUST00000166951 2232 ntTSL 5 BASIC17.21■□□□□ 0.35
Gm17535J3KMR8 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Gm17535J3KMR8 Map4k5-210ENSMUST00000171211 4334 ntTSL 2 BASIC17.21■□□□□ 0.35
Gm17535J3KMR8 Phtf1-201ENSMUST00000055425 3060 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
Gm17535J3KMR8 Otx2-204ENSMUST00000122009 1737 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Gm17535J3KMR8 Slc25a11-201ENSMUST00000014750 1711 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Gm17535J3KMR8 Pak1ip1-201ENSMUST00000046951 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
Gm17535J3KMR8 Rom1-201ENSMUST00000096242 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
Gm17535J3KMR8 Capn10-201ENSMUST00000027488 2902 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Gm17535J3KMR8 Zfp622-201ENSMUST00000061875 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Gm17535J3KMR8 Wasf3-201ENSMUST00000016143 5196 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Gm17535J3KMR8 Cntln-201ENSMUST00000047023 5528 ntAPPRIS ALT2 TSL 5 BASIC17.2■□□□□ 0.34
Gm17535J3KMR8 Nptx2-201ENSMUST00000071782 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Gm17535J3KMR8 Man1c1-202ENSMUST00000054096 4715 ntAPPRIS P1 TSL 5 BASIC17.2■□□□□ 0.34
Gm17535J3KMR8 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC17.2■□□□□ 0.34
Gm17535J3KMR8 Sox13-201ENSMUST00000094551 1842 ntAPPRIS P2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Gm17535J3KMR8 1700008O03Rik-201ENSMUST00000107933 913 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Gm17535J3KMR8 Bex1-203ENSMUST00000113120 718 ntAPPRIS P1 TSL 3 BASIC17.2■□□□□ 0.34
Gm17535J3KMR8 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC17.2■□□□□ 0.34
Gm17535J3KMR8 Zfp747-202ENSMUST00000205832 618 ntTSL 3 BASIC17.2■□□□□ 0.34
Gm17535J3KMR8 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
Gm17535J3KMR8 Gm33054-201ENSMUST00000216588 313 ntTSL 5 BASIC17.2■□□□□ 0.34
Gm17535J3KMR8 Mzt1-203ENSMUST00000227948 952 ntBASIC17.2■□□□□ 0.34
Gm17535J3KMR8 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Gm17535J3KMR8 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Gm17535J3KMR8 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Gm17535J3KMR8 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Gm17535J3KMR8 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Gm17535J3KMR8 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Gm17535J3KMR8 Sept11-205ENSMUST00000201700 3478 ntAPPRIS ALT1 TSL 2 BASIC17.2■□□□□ 0.34
Gm17535J3KMR8 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Gm17535J3KMR8 Neurl1b-201ENSMUST00000053020 6195 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
Gm17535J3KMR8 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
Gm17535J3KMR8 Cpne6-207ENSMUST00000171643 2016 ntAPPRIS P3 TSL 5 BASIC17.2■□□□□ 0.34
Retrieved 100 of 76,532 protein–RNA pairs in 33.2 ms