Protein–RNA interactions for Protein: H3BKF4

Gm20708, Predicted gene 20708, mousemouse

Predictions only

Length 155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm20708H3BKF4 Tbcel-201ENSMUST00000066148 5000 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Gm20708H3BKF4 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Gm20708H3BKF4 Notch4-201ENSMUST00000015612 6591 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Gm20708H3BKF4 Trappc11-202ENSMUST00000120987 2060 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Gm20708H3BKF4 Sorbs1-225ENSMUST00000226047 2582 ntAPPRIS ALT2 BASIC13.62□□□□□ -0.23
Gm20708H3BKF4 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Gm20708H3BKF4 Pla2g2c-201ENSMUST00000030530 1618 ntAPPRIS P1 TSL 3 BASIC13.62□□□□□ -0.23
Gm20708H3BKF4 Lrfn1-202ENSMUST00000108288 3060 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Gm20708H3BKF4 Ppp1r2-202ENSMUST00000115233 958 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Gm20708H3BKF4 2410004I01Rik-201ENSMUST00000138424 1187 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Gm20708H3BKF4 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Gm20708H3BKF4 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC13.62□□□□□ -0.23
Gm20708H3BKF4 Celrr-203ENSMUST00000185678 937 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Gm20708H3BKF4 Ighv6-1-201ENSMUST00000193612 343 ntBASIC13.62□□□□□ -0.23
Gm20708H3BKF4 AC130711.1-201ENSMUST00000224277 906 ntAPPRIS P1 BASIC13.62□□□□□ -0.23
Gm20708H3BKF4 Mrps6-201ENSMUST00000047429 846 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Gm20708H3BKF4 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Gm20708H3BKF4 Gm4425-201ENSMUST00000172838 2857 ntTSL 2 BASIC13.62□□□□□ -0.23
Gm20708H3BKF4 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC13.62□□□□□ -0.23
Gm20708H3BKF4 Kat5-201ENSMUST00000113641 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Gm20708H3BKF4 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Gm20708H3BKF4 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC13.62□□□□□ -0.23
Gm20708H3BKF4 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Gm20708H3BKF4 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Gm20708H3BKF4 Cpeb2-204ENSMUST00000166713 6846 ntAPPRIS ALT2 TSL 5 BASIC13.62□□□□□ -0.23
Gm20708H3BKF4 Rccd1-202ENSMUST00000121882 2324 ntAPPRIS P1 TSL 5 BASIC13.62□□□□□ -0.23
Gm20708H3BKF4 Gm14066-201ENSMUST00000134801 2057 ntTSL 1 (best) BASIC13.62□□□□□ -0.23
Gm20708H3BKF4 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC13.62□□□□□ -0.23
Gm20708H3BKF4 1300014J16Rik-201ENSMUST00000219015 1337 ntBASIC13.62□□□□□ -0.23
Gm20708H3BKF4 Btnl9-201ENSMUST00000046522 5273 ntAPPRIS P2 TSL 1 (best) BASIC13.62□□□□□ -0.23
Gm20708H3BKF4 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
Gm20708H3BKF4 Rnf13-205ENSMUST00000198214 2027 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Gm20708H3BKF4 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Gm20708H3BKF4 Gm16181-201ENSMUST00000118793 567 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Gm20708H3BKF4 Cul4a-202ENSMUST00000121426 1044 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
Gm20708H3BKF4 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Gm20708H3BKF4 Otx2os1-206ENSMUST00000228153 787 ntBASIC13.61□□□□□ -0.23
Gm20708H3BKF4 Hist1h1a-201ENSMUST00000055770 741 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
Gm20708H3BKF4 Prima1-201ENSMUST00000074416 909 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Gm20708H3BKF4 Tubg1-201ENSMUST00000043680 1802 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Gm20708H3BKF4 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Gm20708H3BKF4 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Gm20708H3BKF4 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Gm20708H3BKF4 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Gm20708H3BKF4 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Gm20708H3BKF4 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Gm20708H3BKF4 Pofut2-201ENSMUST00000020493 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Gm20708H3BKF4 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Gm20708H3BKF4 Tfeb-204ENSMUST00000113288 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
Gm20708H3BKF4 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Gm20708H3BKF4 Tpm1-215ENSMUST00000113705 1759 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Gm20708H3BKF4 Pnpla2-202ENSMUST00000064151 1799 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Gm20708H3BKF4 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Gm20708H3BKF4 Tbc1d19-201ENSMUST00000037337 2273 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Gm20708H3BKF4 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Gm20708H3BKF4 Pcdhac2-201ENSMUST00000047479 5888 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Gm20708H3BKF4 Znhit1-203ENSMUST00000111090 698 ntTSL 2 BASIC13.6□□□□□ -0.23
Gm20708H3BKF4 Zfp133-ps-202ENSMUST00000124788 1079 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Gm20708H3BKF4 Lce1k-201ENSMUST00000179917 663 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
Gm20708H3BKF4 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Gm20708H3BKF4 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Gm20708H3BKF4 Ina-201ENSMUST00000037636 3240 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Gm20708H3BKF4 Hist1h2ba-201ENSMUST00000052776 384 ntAPPRIS P1 BASIC13.6□□□□□ -0.23
Gm20708H3BKF4 4930451I11Rik-201ENSMUST00000061695 481 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Gm20708H3BKF4 T-201ENSMUST00000074667 2046 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Gm20708H3BKF4 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Gm20708H3BKF4 Dip2c-203ENSMUST00000174552 8023 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Gm20708H3BKF4 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Gm20708H3BKF4 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC13.6□□□□□ -0.23
Gm20708H3BKF4 2810468N07Rik-201ENSMUST00000163493 1349 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Gm20708H3BKF4 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Gm20708H3BKF4 Cyp46a1-201ENSMUST00000021684 2118 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Gm20708H3BKF4 Slc27a4-201ENSMUST00000080065 4054 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Gm20708H3BKF4 Psen2-203ENSMUST00000111105 1575 ntAPPRIS P2 TSL 5 BASIC13.59□□□□□ -0.23
Gm20708H3BKF4 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Gm20708H3BKF4 Ghrhr-201ENSMUST00000063578 1550 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Gm20708H3BKF4 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Gm20708H3BKF4 Lrp8os3-201ENSMUST00000125464 1770 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Gm20708H3BKF4 Borcs5-201ENSMUST00000062755 1764 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Gm20708H3BKF4 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Gm20708H3BKF4 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC13.59□□□□□ -0.23
Gm20708H3BKF4 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Gm20708H3BKF4 Upk3a-201ENSMUST00000023070 1106 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Gm20708H3BKF4 Gm9991-201ENSMUST00000070048 1207 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Gm20708H3BKF4 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC13.59□□□□□ -0.23
Gm20708H3BKF4 Rbpj-203ENSMUST00000113865 5440 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Gm20708H3BKF4 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Gm20708H3BKF4 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Gm20708H3BKF4 Smtn-201ENSMUST00000020718 1747 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Gm20708H3BKF4 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Gm20708H3BKF4 Gm19430-201ENSMUST00000193847 2137 ntBASIC13.58□□□□□ -0.23
Gm20708H3BKF4 AC069562.2-201ENSMUST00000224644 2146 ntBASIC13.58□□□□□ -0.23
Gm20708H3BKF4 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC13.58□□□□□ -0.23
Gm20708H3BKF4 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Gm20708H3BKF4 Pex5-202ENSMUST00000080557 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Gm20708H3BKF4 Zfp862-ps-203ENSMUST00000203848 1776 ntTSL 1 (best) BASIC13.58□□□□□ -0.23
Gm20708H3BKF4 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Gm20708H3BKF4 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC13.58□□□□□ -0.24
Gm20708H3BKF4 Nagk-201ENSMUST00000037376 1405 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Gm20708H3BKF4 Phtf1-202ENSMUST00000063717 3327 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms