Protein–RNA interactions for Protein: G3X8Z7

Chrna9, Cholinergic receptor, nicotinic, alpha polypeptide 9, mousemouse

Predictions only

Length 479 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chrna9G3X8Z7 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Chrna9G3X8Z7 Gm26904-201ENSMUST00000181301 1742 ntTSL 5 BASIC17.48■□□□□ 0.39
Chrna9G3X8Z7 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Chrna9G3X8Z7 Gm13420-201ENSMUST00000129574 1091 ntAPPRIS P1 TSL 5 BASIC17.48■□□□□ 0.39
Chrna9G3X8Z7 Atp6v1g2-203ENSMUST00000130992 524 ntTSL 2 BASIC17.48■□□□□ 0.39
Chrna9G3X8Z7 Has3-202ENSMUST00000175987 1154 ntTSL 5 BASIC17.48■□□□□ 0.39
Chrna9G3X8Z7 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC17.48■□□□□ 0.39
Chrna9G3X8Z7 Rpl13a-204ENSMUST00000209711 495 ntTSL 3 BASIC17.48■□□□□ 0.39
Chrna9G3X8Z7 3110040N11Rik-201ENSMUST00000026092 887 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Chrna9G3X8Z7 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Chrna9G3X8Z7 Casp8-204ENSMUST00000191201 1849 ntAPPRIS ALT2 TSL 5 BASIC17.48■□□□□ 0.39
Chrna9G3X8Z7 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
Chrna9G3X8Z7 Rusc2-202ENSMUST00000098106 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Chrna9G3X8Z7 Pdzd8-201ENSMUST00000099274 7076 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Chrna9G3X8Z7 Ubqln4-201ENSMUST00000008748 3330 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Chrna9G3X8Z7 Disc1-208ENSMUST00000122389 1694 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
Chrna9G3X8Z7 Pfkfb4-203ENSMUST00000198140 3488 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
Chrna9G3X8Z7 Ttc14-203ENSMUST00000117915 4913 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Chrna9G3X8Z7 Haghl-201ENSMUST00000077938 1405 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Chrna9G3X8Z7 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Chrna9G3X8Z7 Rgs9-202ENSMUST00000103062 1743 ntTSL 5 BASIC17.47■□□□□ 0.39
Chrna9G3X8Z7 Rad23a-202ENSMUST00000109761 1842 ntAPPRIS ALT1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Chrna9G3X8Z7 Fam57a-205ENSMUST00000169560 1806 ntTSL 5 BASIC17.47■□□□□ 0.39
Chrna9G3X8Z7 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Chrna9G3X8Z7 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Chrna9G3X8Z7 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC17.47■□□□□ 0.39
Chrna9G3X8Z7 Hnrnph3-203ENSMUST00000119814 682 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Chrna9G3X8Z7 Gm11355-201ENSMUST00000121120 306 ntBASIC17.47■□□□□ 0.39
Chrna9G3X8Z7 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Chrna9G3X8Z7 Efcab11-207ENSMUST00000223114 1122 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
Chrna9G3X8Z7 0610009B22Rik-201ENSMUST00000007921 813 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Chrna9G3X8Z7 Gm29455-202ENSMUST00000186697 1369 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Chrna9G3X8Z7 Klf7-201ENSMUST00000055001 1477 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Chrna9G3X8Z7 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Chrna9G3X8Z7 Pgap2-203ENSMUST00000120119 1979 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Chrna9G3X8Z7 9530059O14Rik-202ENSMUST00000181682 2093 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
Chrna9G3X8Z7 Men1-201ENSMUST00000056391 2975 ntAPPRIS P2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Chrna9G3X8Z7 Ttc13-203ENSMUST00000118134 3277 ntTSL 5 BASIC17.47■□□□□ 0.39
Chrna9G3X8Z7 Tbc1d9-202ENSMUST00000093393 5334 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Chrna9G3X8Z7 App-207ENSMUST00000227737 2827 ntBASIC17.47■□□□□ 0.39
Chrna9G3X8Z7 Bpifb5-201ENSMUST00000045959 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
Chrna9G3X8Z7 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Chrna9G3X8Z7 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Chrna9G3X8Z7 Tbp-202ENSMUST00000117593 2067 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Chrna9G3X8Z7 Hs3st1-201ENSMUST00000053116 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Chrna9G3X8Z7 Zswim8-208ENSMUST00000224751 5951 ntAPPRIS ALT2 BASIC17.46■□□□□ 0.39
Chrna9G3X8Z7 Elk4-202ENSMUST00000086556 4433 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Chrna9G3X8Z7 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Chrna9G3X8Z7 Gm9774-202ENSMUST00000192538 1392 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Chrna9G3X8Z7 Higd1a-201ENSMUST00000060251 2232 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Chrna9G3X8Z7 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Chrna9G3X8Z7 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Chrna9G3X8Z7 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Chrna9G3X8Z7 4930505N22Rik-201ENSMUST00000181820 945 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Chrna9G3X8Z7 Krtap5-1-202ENSMUST00000188274 742 ntBASIC17.46■□□□□ 0.39
Chrna9G3X8Z7 Olfr315-201ENSMUST00000081533 998 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
Chrna9G3X8Z7 Usf3-201ENSMUST00000088356 757 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.39
Chrna9G3X8Z7 Cpq-201ENSMUST00000042167 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
Chrna9G3X8Z7 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Chrna9G3X8Z7 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
Chrna9G3X8Z7 Mettl16-201ENSMUST00000010698 2073 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
Chrna9G3X8Z7 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC17.46■□□□□ 0.38
Chrna9G3X8Z7 Sptbn4-201ENSMUST00000011895 8747 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.38
Chrna9G3X8Z7 Mfsd10-203ENSMUST00000114331 1754 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Chrna9G3X8Z7 Camk2d-221ENSMUST00000171289 2217 ntTSL 5 BASIC17.45■□□□□ 0.38
Chrna9G3X8Z7 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Chrna9G3X8Z7 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Chrna9G3X8Z7 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Chrna9G3X8Z7 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Chrna9G3X8Z7 Atp2c1-205ENSMUST00000163879 2408 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Chrna9G3X8Z7 Rffl-206ENSMUST00000108173 3489 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Chrna9G3X8Z7 Gm20878-202ENSMUST00000108028 339 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
Chrna9G3X8Z7 0610009B22Rik-202ENSMUST00000109098 892 ntAPPRIS P1 TSL 3 BASIC17.45■□□□□ 0.38
Chrna9G3X8Z7 Bhlhe41-202ENSMUST00000111703 744 ntTSL 3 BASIC17.45■□□□□ 0.38
Chrna9G3X8Z7 4930405A21Rik-202ENSMUST00000139042 994 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Chrna9G3X8Z7 Ccdc125-202ENSMUST00000170347 1216 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Chrna9G3X8Z7 Cacna2d1-207ENSMUST00000196750 1272 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Chrna9G3X8Z7 1810010D01Rik-204ENSMUST00000208788 889 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Chrna9G3X8Z7 Gm18101-201ENSMUST00000215769 548 ntBASIC17.45■□□□□ 0.38
Chrna9G3X8Z7 Mrpl43-201ENSMUST00000097715 1213 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Chrna9G3X8Z7 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Chrna9G3X8Z7 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Chrna9G3X8Z7 Arntl2-204ENSMUST00000111639 2923 ntAPPRIS P3 TSL 5 BASIC17.45■□□□□ 0.38
Chrna9G3X8Z7 B3gnt5-202ENSMUST00000119468 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Chrna9G3X8Z7 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Chrna9G3X8Z7 Jakmip1-202ENSMUST00000121010 2496 ntTSL 5 BASIC17.45■□□□□ 0.38
Chrna9G3X8Z7 Gm38327-201ENSMUST00000195852 1755 ntBASIC17.45■□□□□ 0.38
Chrna9G3X8Z7 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC17.45■□□□□ 0.38
Chrna9G3X8Z7 Ccdc174-201ENSMUST00000037783 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Chrna9G3X8Z7 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
Chrna9G3X8Z7 Dohh-201ENSMUST00000072751 1444 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Chrna9G3X8Z7 Hoxaas2-202ENSMUST00000155922 1567 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
Chrna9G3X8Z7 Prlhr-201ENSMUST00000051277 1572 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
Chrna9G3X8Z7 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
Chrna9G3X8Z7 Haus3-201ENSMUST00000060049 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Chrna9G3X8Z7 Hpn-201ENSMUST00000039435 1743 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Chrna9G3X8Z7 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
Chrna9G3X8Z7 D930048G16Rik-201ENSMUST00000180975 2266 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Chrna9G3X8Z7 Eda-204ENSMUST00000113777 1056 ntTSL 5 BASIC17.44■□□□□ 0.38
Chrna9G3X8Z7 Eda-201ENSMUST00000071453 1152 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
Retrieved 100 of 76,532 protein–RNA pairs in 58.3 ms