Protein–RNA interactions for Protein: F7BJK1

Pcdh1, Protocadherin 1 (Fragment), mousemouse

Predictions only

Length 1,077 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh1F7BJK1 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdh1F7BJK1 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdh1F7BJK1 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdh1F7BJK1 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC14.65□□□□□ -0.06
Pcdh1F7BJK1 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdh1F7BJK1 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdh1F7BJK1 Narfl-201ENSMUST00000002350 2555 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdh1F7BJK1 Fam222b-202ENSMUST00000100782 2473 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdh1F7BJK1 Anks1b-219ENSMUST00000182600 1697 ntTSL 5 BASIC14.65□□□□□ -0.06
Pcdh1F7BJK1 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdh1F7BJK1 Lcmt2-201ENSMUST00000099486 2047 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Pcdh1F7BJK1 Chpf-201ENSMUST00000079205 2892 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdh1F7BJK1 Wbp4-201ENSMUST00000022601 3704 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdh1F7BJK1 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdh1F7BJK1 Ttll5-204ENSMUST00000110220 2655 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdh1F7BJK1 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdh1F7BJK1 Sdc1-205ENSMUST00000171158 2311 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdh1F7BJK1 Crem-203ENSMUST00000082141 2820 ntTSL 5 BASIC14.64□□□□□ -0.07
Pcdh1F7BJK1 Zkscan3-208ENSMUST00000224820 5398 ntBASIC14.64□□□□□ -0.07
Pcdh1F7BJK1 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdh1F7BJK1 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC14.64□□□□□ -0.07
Pcdh1F7BJK1 Gm22240-201ENSMUST00000175225 82 ntBASIC14.64□□□□□ -0.07
Pcdh1F7BJK1 Pgpep1-208ENSMUST00000211715 676 ntTSL 3 BASIC14.64□□□□□ -0.07
Pcdh1F7BJK1 AC154649.1-201ENSMUST00000227392 384 ntBASIC14.64□□□□□ -0.07
Pcdh1F7BJK1 Tm2d1-201ENSMUST00000030292 952 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdh1F7BJK1 Lysmd2-201ENSMUST00000034702 1189 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdh1F7BJK1 BC048679-201ENSMUST00000073406 522 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdh1F7BJK1 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdh1F7BJK1 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC14.64□□□□□ -0.07
Pcdh1F7BJK1 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdh1F7BJK1 Klhl33-202ENSMUST00000170855 1422 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdh1F7BJK1 Espn-204ENSMUST00000080042 1402 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdh1F7BJK1 P2ry6-201ENSMUST00000060174 1946 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdh1F7BJK1 Gm16279-201ENSMUST00000149452 2945 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdh1F7BJK1 Il7-203ENSMUST00000192202 2057 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdh1F7BJK1 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Pcdh1F7BJK1 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdh1F7BJK1 Nrg2-203ENSMUST00000115713 3001 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Pcdh1F7BJK1 2810013P06Rik-201ENSMUST00000186531 2137 ntBASIC14.63□□□□□ -0.07
Pcdh1F7BJK1 Arhgef11-201ENSMUST00000039476 6776 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdh1F7BJK1 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC14.63□□□□□ -0.07
Pcdh1F7BJK1 Nrxn1-216ENSMUST00000174331 6282 ntAPPRIS ALT1 TSL 5 BASIC14.63□□□□□ -0.07
Pcdh1F7BJK1 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdh1F7BJK1 Rassf1-204ENSMUST00000122225 1783 ntTSL 5 BASIC14.63□□□□□ -0.07
Pcdh1F7BJK1 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdh1F7BJK1 Slc35b2-202ENSMUST00000223987 1766 ntBASIC14.63□□□□□ -0.07
Pcdh1F7BJK1 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdh1F7BJK1 Taf5-201ENSMUST00000026027 3258 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdh1F7BJK1 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdh1F7BJK1 Slc23a3-201ENSMUST00000027405 2059 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdh1F7BJK1 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC14.63□□□□□ -0.07
Pcdh1F7BJK1 Gtf3a-204ENSMUST00000146511 1298 ntAPPRIS P5 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdh1F7BJK1 Gm27011-201ENSMUST00000182352 972 ntBASIC14.63□□□□□ -0.07
Pcdh1F7BJK1 Gm16042-201ENSMUST00000204813 1247 ntBASIC14.63□□□□□ -0.07
Pcdh1F7BJK1 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC14.63□□□□□ -0.07
Pcdh1F7BJK1 Fgf22-203ENSMUST00000219981 1070 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdh1F7BJK1 AL731706.1-201ENSMUST00000227806 944 ntAPPRIS ALT2 BASIC14.63□□□□□ -0.07
Pcdh1F7BJK1 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdh1F7BJK1 Pigf-201ENSMUST00000024957 988 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdh1F7BJK1 Plpp1-202ENSMUST00000070951 1272 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdh1F7BJK1 Tekt1-202ENSMUST00000108502 1403 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdh1F7BJK1 Pprc1-203ENSMUST00000111899 5246 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdh1F7BJK1 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdh1F7BJK1 Rasgrp1-207ENSMUST00000178884 5104 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdh1F7BJK1 Ralgapa1-202ENSMUST00000110687 7874 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdh1F7BJK1 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Pcdh1F7BJK1 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdh1F7BJK1 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdh1F7BJK1 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdh1F7BJK1 Mpdu1-201ENSMUST00000018905 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdh1F7BJK1 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdh1F7BJK1 Rpl5-201ENSMUST00000082223 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdh1F7BJK1 Abhd11-206ENSMUST00000154469 1473 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdh1F7BJK1 Bnip2-202ENSMUST00000085393 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Pcdh1F7BJK1 Pnkp-203ENSMUST00000107876 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdh1F7BJK1 Tmem5-205ENSMUST00000140299 4793 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdh1F7BJK1 Dsg2-201ENSMUST00000059787 5766 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdh1F7BJK1 Eml5-210ENSMUST00000223282 7595 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Pcdh1F7BJK1 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdh1F7BJK1 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdh1F7BJK1 Phf7-203ENSMUST00000226565 1971 ntBASIC14.62□□□□□ -0.07
Pcdh1F7BJK1 Pde1c-203ENSMUST00000164037 3068 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdh1F7BJK1 Gm2990-201ENSMUST00000180662 1118 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdh1F7BJK1 2510002D24Rik-204ENSMUST00000191388 995 ntTSL 5 BASIC14.62□□□□□ -0.07
Pcdh1F7BJK1 Rps2-ps2-201ENSMUST00000194305 881 ntBASIC14.62□□□□□ -0.07
Pcdh1F7BJK1 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC14.62□□□□□ -0.07
Pcdh1F7BJK1 Gm45894-202ENSMUST00000212728 1097 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdh1F7BJK1 AC124601.2-201ENSMUST00000222888 759 ntTSL 2 BASIC14.62□□□□□ -0.07
Pcdh1F7BJK1 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdh1F7BJK1 Gm10812-201ENSMUST00000099864 546 ntBASIC14.62□□□□□ -0.07
Pcdh1F7BJK1 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdh1F7BJK1 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdh1F7BJK1 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC14.62□□□□□ -0.07
Pcdh1F7BJK1 Lbp-201ENSMUST00000016168 2525 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdh1F7BJK1 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC14.62□□□□□ -0.07
Pcdh1F7BJK1 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdh1F7BJK1 Gm14026-201ENSMUST00000120625 1789 ntBASIC14.62□□□□□ -0.07
Pcdh1F7BJK1 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdh1F7BJK1 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC14.62□□□□□ -0.07
Pcdh1F7BJK1 Cdyl2-201ENSMUST00000109102 2411 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms