Protein–RNA interactions for Protein: F6VAN0

Atf6, Cyclic AMP-dependent transcription factor ATF-6 alpha, mousemouse

Predictions only

Length 656 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atf6F6VAN0 Celf1-201ENSMUST00000005643 4830 ntAPPRIS P4 TSL 5 BASIC16.72■□□□□ 0.27
Atf6F6VAN0 Actr8-201ENSMUST00000016115 2119 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Atf6F6VAN0 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
Atf6F6VAN0 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Atf6F6VAN0 Camk2d-226ENSMUST00000199300 5524 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Atf6F6VAN0 Nrip1-201ENSMUST00000054178 4529 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Atf6F6VAN0 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Atf6F6VAN0 Agfg1-208ENSMUST00000190052 2991 ntTSL 5 BASIC16.71■□□□□ 0.27
Atf6F6VAN0 Crhr2-203ENSMUST00000114374 1440 ntAPPRIS ALT1 TSL 5 BASIC16.71■□□□□ 0.27
Atf6F6VAN0 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Atf6F6VAN0 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Atf6F6VAN0 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Atf6F6VAN0 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Atf6F6VAN0 Gm26825-201ENSMUST00000181751 2026 ntTSL 5 BASIC16.71■□□□□ 0.27
Atf6F6VAN0 Rabep1-201ENSMUST00000076270 5408 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Atf6F6VAN0 Gmcl1-202ENSMUST00000113679 960 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Atf6F6VAN0 Rab3d-202ENSMUST00000119055 694 ntTSL 3 BASIC16.71■□□□□ 0.27
Atf6F6VAN0 Gm11355-201ENSMUST00000121120 306 ntBASIC16.71■□□□□ 0.27
Atf6F6VAN0 Gm13524-201ENSMUST00000125869 662 ntTSL 3 BASIC16.71■□□□□ 0.27
Atf6F6VAN0 Gm13025-201ENSMUST00000141469 1163 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Atf6F6VAN0 Gm12359-202ENSMUST00000141696 713 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Atf6F6VAN0 Gm12359-203ENSMUST00000153181 680 ntTSL 3 BASIC16.71■□□□□ 0.27
Atf6F6VAN0 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC16.71■□□□□ 0.27
Atf6F6VAN0 Grtp1-204ENSMUST00000209691 1030 ntTSL 5 BASIC16.71■□□□□ 0.27
Atf6F6VAN0 Pafah1b3-201ENSMUST00000005583 901 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Atf6F6VAN0 Abcc5-203ENSMUST00000096199 1136 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Atf6F6VAN0 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Atf6F6VAN0 Ccnyl1-202ENSMUST00000114077 3281 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Atf6F6VAN0 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Atf6F6VAN0 Slc39a1-201ENSMUST00000015467 2364 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.26
Atf6F6VAN0 Irak1-201ENSMUST00000033769 2890 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.26
Atf6F6VAN0 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Atf6F6VAN0 Kdf1-201ENSMUST00000042919 1708 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Atf6F6VAN0 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Atf6F6VAN0 Map1s-201ENSMUST00000019405 3314 ntAPPRIS P2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Atf6F6VAN0 Ado-201ENSMUST00000075686 4445 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Atf6F6VAN0 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Atf6F6VAN0 Gm26891-201ENSMUST00000181644 2599 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Atf6F6VAN0 Cend1-201ENSMUST00000084436 1672 ntAPPRIS P1 TSL 5 BASIC16.7■□□□□ 0.26
Atf6F6VAN0 4930474H06Rik-201ENSMUST00000132822 1590 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Atf6F6VAN0 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Atf6F6VAN0 Nsfl1c-201ENSMUST00000028949 1364 ntAPPRIS ALT1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Atf6F6VAN0 Gm10013-201ENSMUST00000106074 672 ntBASIC16.7■□□□□ 0.26
Atf6F6VAN0 Arnt-204ENSMUST00000107160 783 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Atf6F6VAN0 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC16.7■□□□□ 0.26
Atf6F6VAN0 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC16.7■□□□□ 0.26
Atf6F6VAN0 Mir7071-201ENSMUST00000184847 69 ntBASIC16.7■□□□□ 0.26
Atf6F6VAN0 Ankrd40-201ENSMUST00000021227 1215 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Atf6F6VAN0 Zic5-201ENSMUST00000039118 4767 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Atf6F6VAN0 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC16.7■□□□□ 0.26
Atf6F6VAN0 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Atf6F6VAN0 Fmnl3-201ENSMUST00000081224 4137 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Atf6F6VAN0 Dach1-201ENSMUST00000069334 5063 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
Atf6F6VAN0 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Atf6F6VAN0 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Atf6F6VAN0 Patz1-205ENSMUST00000110043 3702 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Atf6F6VAN0 Ush1c-208ENSMUST00000177212 1696 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Atf6F6VAN0 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Atf6F6VAN0 Bnip2-203ENSMUST00000117450 1465 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Atf6F6VAN0 Ssfa2-201ENSMUST00000111784 4999 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Atf6F6VAN0 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Atf6F6VAN0 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
Atf6F6VAN0 Pthlh-202ENSMUST00000204197 1281 ntAPPRIS P1 TSL 5 BASIC16.69■□□□□ 0.26
Atf6F6VAN0 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Atf6F6VAN0 Nipa2-201ENSMUST00000032635 3197 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Atf6F6VAN0 Rint1-205ENSMUST00000120869 1886 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Atf6F6VAN0 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Atf6F6VAN0 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Atf6F6VAN0 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Atf6F6VAN0 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Atf6F6VAN0 Etnk2-203ENSMUST00000135222 2297 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Atf6F6VAN0 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Atf6F6VAN0 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC16.68■□□□□ 0.26
Atf6F6VAN0 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Atf6F6VAN0 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC16.68■□□□□ 0.26
Atf6F6VAN0 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Atf6F6VAN0 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC16.68■□□□□ 0.26
Atf6F6VAN0 Cd164-201ENSMUST00000019962 2922 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Atf6F6VAN0 Efr3a-201ENSMUST00000015146 5215 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Atf6F6VAN0 Hist1h2bf-201ENSMUST00000105106 461 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
Atf6F6VAN0 Myoz1-201ENSMUST00000090469 1289 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Atf6F6VAN0 Map3k7-201ENSMUST00000037607 5773 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Atf6F6VAN0 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC16.68■□□□□ 0.26
Atf6F6VAN0 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC16.68■□□□□ 0.26
Atf6F6VAN0 Zfp689-202ENSMUST00000106299 1417 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Atf6F6VAN0 Tmem260-201ENSMUST00000111735 5485 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Atf6F6VAN0 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Atf6F6VAN0 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Atf6F6VAN0 H2-K1-205ENSMUST00000172912 1570 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Atf6F6VAN0 Ctu1-201ENSMUST00000038332 2475 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Atf6F6VAN0 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Atf6F6VAN0 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Atf6F6VAN0 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Atf6F6VAN0 Dnah9-202ENSMUST00000108691 2671 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Atf6F6VAN0 Dab2-208ENSMUST00000160134 1374 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Atf6F6VAN0 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Atf6F6VAN0 Malsu1-203ENSMUST00000128616 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Atf6F6VAN0 Irf7-202ENSMUST00000097952 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Atf6F6VAN0 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Atf6F6VAN0 Hey2-201ENSMUST00000019924 2550 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 28.2 ms