Protein–RNA interactions for Protein: D3Z3K2

Ccnb1ip1, E3 ubiquitin-protein ligase CCNB1IP1, mousemouse

Predictions only

Length 276 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccnb1ip1D3Z3K2 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Ccnb1ip1D3Z3K2 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC14.78□□□□□ -0.04
Ccnb1ip1D3Z3K2 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC14.78□□□□□ -0.04
Ccnb1ip1D3Z3K2 Bahd1-201ENSMUST00000036578 4594 ntAPPRIS P1 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ccnb1ip1D3Z3K2 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC14.78□□□□□ -0.04
Ccnb1ip1D3Z3K2 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC14.78□□□□□ -0.04
Ccnb1ip1D3Z3K2 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC14.77□□□□□ -0.04
Ccnb1ip1D3Z3K2 Atp11b-201ENSMUST00000029257 4868 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Ccnb1ip1D3Z3K2 Mrpl9-201ENSMUST00000029786 1612 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Ccnb1ip1D3Z3K2 Prdm4-201ENSMUST00000037646 3877 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Ccnb1ip1D3Z3K2 Btd-201ENSMUST00000090147 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Ccnb1ip1D3Z3K2 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC14.77□□□□□ -0.04
Ccnb1ip1D3Z3K2 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
Ccnb1ip1D3Z3K2 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Ccnb1ip1D3Z3K2 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
Ccnb1ip1D3Z3K2 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Ccnb1ip1D3Z3K2 Kmt5b-206ENSMUST00000113973 6130 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.04
Ccnb1ip1D3Z3K2 Gm29394-202ENSMUST00000176935 1326 ntAPPRIS P5 TSL 2 BASIC14.77□□□□□ -0.04
Ccnb1ip1D3Z3K2 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Ccnb1ip1D3Z3K2 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC14.77□□□□□ -0.04
Ccnb1ip1D3Z3K2 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.04
Ccnb1ip1D3Z3K2 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Ccnb1ip1D3Z3K2 Mcrs1-201ENSMUST00000041190 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.04
Ccnb1ip1D3Z3K2 Synm-204ENSMUST00000208231 4457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.04
Ccnb1ip1D3Z3K2 Tmc6-202ENSMUST00000103025 1279 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Ccnb1ip1D3Z3K2 Rgl1-203ENSMUST00000111859 5092 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
Ccnb1ip1D3Z3K2 Men1-205ENSMUST00000113501 2508 ntTSL 5 BASIC14.77□□□□□ -0.05
Ccnb1ip1D3Z3K2 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Ccnb1ip1D3Z3K2 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Ccnb1ip1D3Z3K2 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Ccnb1ip1D3Z3K2 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Ccnb1ip1D3Z3K2 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Ccnb1ip1D3Z3K2 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
Ccnb1ip1D3Z3K2 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Ccnb1ip1D3Z3K2 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC14.77□□□□□ -0.05
Ccnb1ip1D3Z3K2 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC14.77□□□□□ -0.05
Ccnb1ip1D3Z3K2 C2cd2l-206ENSMUST00000214602 2808 ntTSL 1 (best) BASIC14.77□□□□□ -0.05
Ccnb1ip1D3Z3K2 Hpca-202ENSMUST00000095807 1666 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Ccnb1ip1D3Z3K2 6030419C18Rik-202ENSMUST00000216294 1601 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Ccnb1ip1D3Z3K2 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC14.77□□□□□ -0.05
Ccnb1ip1D3Z3K2 Arfgap2-202ENSMUST00000080008 3068 ntAPPRIS P1 TSL 1 (best) BASIC14.77□□□□□ -0.05
Ccnb1ip1D3Z3K2 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Ccnb1ip1D3Z3K2 Zfp865-201ENSMUST00000076251 7503 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ccnb1ip1D3Z3K2 Dip2b-202ENSMUST00000100203 8914 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ccnb1ip1D3Z3K2 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ccnb1ip1D3Z3K2 Ptprt-202ENSMUST00000109442 7719 ntAPPRIS ALT2 TSL 5 BASIC14.76□□□□□ -0.05
Ccnb1ip1D3Z3K2 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC14.76□□□□□ -0.05
Ccnb1ip1D3Z3K2 Tnfsf13-201ENSMUST00000018896 1407 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ccnb1ip1D3Z3K2 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ccnb1ip1D3Z3K2 Tmem185b-202ENSMUST00000183952 2824 ntAPPRIS P1 BASIC14.76□□□□□ -0.05
Ccnb1ip1D3Z3K2 Muc3a-201ENSMUST00000179412 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ccnb1ip1D3Z3K2 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ccnb1ip1D3Z3K2 Kif21a-201ENSMUST00000067205 6307 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ccnb1ip1D3Z3K2 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC14.76□□□□□ -0.05
Ccnb1ip1D3Z3K2 Vax2os-202ENSMUST00000150233 595 ntTSL 3 BASIC14.76□□□□□ -0.05
Ccnb1ip1D3Z3K2 Nnat-205ENSMUST00000153739 1146 ntAPPRIS ALT1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ccnb1ip1D3Z3K2 Nnat-210ENSMUST00000173839 1135 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Ccnb1ip1D3Z3K2 Gclm-206ENSMUST00000178826 1002 ntAPPRIS P1 TSL 5 BASIC14.76□□□□□ -0.05
Ccnb1ip1D3Z3K2 1700097N02Rik-201ENSMUST00000188852 845 ntTSL 3 BASIC14.76□□□□□ -0.05
Ccnb1ip1D3Z3K2 Proca1-201ENSMUST00000060539 960 ntAPPRIS ALT2 TSL 2 BASIC14.76□□□□□ -0.05
Ccnb1ip1D3Z3K2 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ccnb1ip1D3Z3K2 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Ccnb1ip1D3Z3K2 Ralbp1-201ENSMUST00000024905 3765 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ccnb1ip1D3Z3K2 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC14.76□□□□□ -0.05
Ccnb1ip1D3Z3K2 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Ccnb1ip1D3Z3K2 Ppp4r4-201ENSMUST00000021631 3964 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ccnb1ip1D3Z3K2 F2-201ENSMUST00000028681 1988 ntAPPRIS P2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ccnb1ip1D3Z3K2 2900052L18Rik-201ENSMUST00000139014 1588 ntTSL 1 (best) BASIC14.76□□□□□ -0.05
Ccnb1ip1D3Z3K2 Dap-201ENSMUST00000044524 1555 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ccnb1ip1D3Z3K2 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ccnb1ip1D3Z3K2 Mapk8ip3-207ENSMUST00000121723 5410 ntAPPRIS ALT2 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ccnb1ip1D3Z3K2 Tmpo-201ENSMUST00000020123 3772 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ccnb1ip1D3Z3K2 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.05
Ccnb1ip1D3Z3K2 Med7-203ENSMUST00000109232 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ccnb1ip1D3Z3K2 Retreg3-202ENSMUST00000107295 3179 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Ccnb1ip1D3Z3K2 Gm42901-201ENSMUST00000197735 3171 ntBASIC14.75□□□□□ -0.05
Ccnb1ip1D3Z3K2 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ccnb1ip1D3Z3K2 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ccnb1ip1D3Z3K2 Gm13509-201ENSMUST00000119733 1308 ntBASIC14.75□□□□□ -0.05
Ccnb1ip1D3Z3K2 Usp35-201ENSMUST00000139582 4262 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
Ccnb1ip1D3Z3K2 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC14.75□□□□□ -0.05
Ccnb1ip1D3Z3K2 Tgfbr3l-201ENSMUST00000110993 1075 ntAPPRIS P1 TSL 5 BASIC14.75□□□□□ -0.05
Ccnb1ip1D3Z3K2 Ttll3-201ENSMUST00000032414 3168 ntAPPRIS P2 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ccnb1ip1D3Z3K2 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC14.75□□□□□ -0.05
Ccnb1ip1D3Z3K2 Trim45-202ENSMUST00000094048 1815 ntTSL 5 BASIC14.75□□□□□ -0.05
Ccnb1ip1D3Z3K2 Fam149b-204ENSMUST00000090503 2053 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Ccnb1ip1D3Z3K2 Flg-201ENSMUST00000050758 1488 ntBASIC14.75□□□□□ -0.05
Ccnb1ip1D3Z3K2 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ccnb1ip1D3Z3K2 Matn1-201ENSMUST00000102576 2001 ntAPPRIS P1 TSL 1 (best) BASIC14.75□□□□□ -0.05
Ccnb1ip1D3Z3K2 Wwox-207ENSMUST00000160862 1715 ntTSL 1 (best) BASIC14.75□□□□□ -0.05
Ccnb1ip1D3Z3K2 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ccnb1ip1D3Z3K2 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC14.74□□□□□ -0.05
Ccnb1ip1D3Z3K2 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ccnb1ip1D3Z3K2 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ccnb1ip1D3Z3K2 Tmem2-201ENSMUST00000025663 6585 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ccnb1ip1D3Z3K2 Aatk-202ENSMUST00000103019 5177 ntAPPRIS P3 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ccnb1ip1D3Z3K2 Vps37c-201ENSMUST00000087951 2415 ntAPPRIS P1 TSL 1 (best) BASIC14.74□□□□□ -0.05
Ccnb1ip1D3Z3K2 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC14.74□□□□□ -0.05
Ccnb1ip1D3Z3K2 Slc35g2-201ENSMUST00000093792 1590 ntAPPRIS P1 TSL 2 BASIC14.74□□□□□ -0.05
Ccnb1ip1D3Z3K2 Hist1h2bp-201ENSMUST00000102982 469 ntAPPRIS P1 BASIC14.74□□□□□ -0.05
Retrieved 100 of 76,532 protein–RNA pairs in 21.7 ms