Protein–RNA interactions for Protein: A3KFM7

Chd6, Chromodomain-helicase-DNA-binding protein 6, mousemouse

Predictions only

Length 2,711 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd6A3KFM7 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Chd6A3KFM7 Gm12176-201ENSMUST00000121420 875 ntBASIC13.16□□□□□ -0.3
Chd6A3KFM7 Gm15487-201ENSMUST00000122373 465 ntBASIC13.16□□□□□ -0.3
Chd6A3KFM7 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC13.16□□□□□ -0.3
Chd6A3KFM7 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC13.16□□□□□ -0.3
Chd6A3KFM7 Gm16215-201ENSMUST00000161990 637 ntBASIC13.16□□□□□ -0.3
Chd6A3KFM7 Tnfrsf12a-202ENSMUST00000167059 858 ntTSL 2 BASIC13.16□□□□□ -0.3
Chd6A3KFM7 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Chd6A3KFM7 Gm20509-201ENSMUST00000174203 1016 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Chd6A3KFM7 Cldn25-ps-201ENSMUST00000197641 693 ntBASIC13.16□□□□□ -0.3
Chd6A3KFM7 Gm5779-201ENSMUST00000218467 910 ntBASIC13.16□□□□□ -0.3
Chd6A3KFM7 Wdyhv1-203ENSMUST00000226889 394 ntBASIC13.16□□□□□ -0.3
Chd6A3KFM7 Tnfrsf12a-201ENSMUST00000024698 963 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Chd6A3KFM7 Fam109a-201ENSMUST00000056654 2368 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Chd6A3KFM7 Exoc3l2-202ENSMUST00000137613 4016 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Chd6A3KFM7 Clint1-201ENSMUST00000109260 3311 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Chd6A3KFM7 Rnps1-203ENSMUST00000163717 1920 ntAPPRIS P1 TSL 5 BASIC13.16□□□□□ -0.3
Chd6A3KFM7 AU022751-201ENSMUST00000101698 1838 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Chd6A3KFM7 Pmpcb-201ENSMUST00000030882 1615 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Chd6A3KFM7 Wnt10a-201ENSMUST00000006718 2468 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Chd6A3KFM7 Hoxb5-201ENSMUST00000049272 1895 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Chd6A3KFM7 Gm3365-201ENSMUST00000216296 1480 ntBASIC13.15□□□□□ -0.3
Chd6A3KFM7 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Chd6A3KFM7 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Chd6A3KFM7 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC13.15□□□□□ -0.3
Chd6A3KFM7 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC13.15□□□□□ -0.3
Chd6A3KFM7 Gm6473-201ENSMUST00000188572 1210 ntBASIC13.15□□□□□ -0.3
Chd6A3KFM7 AC093926.2-201ENSMUST00000214468 1228 ntBASIC13.15□□□□□ -0.3
Chd6A3KFM7 Itgb5-201ENSMUST00000069345 3056 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Chd6A3KFM7 Slc29a1-222ENSMUST00000171847 2033 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Chd6A3KFM7 Zfp264-201ENSMUST00000208656 1563 ntBASIC13.15□□□□□ -0.3
Chd6A3KFM7 Glmn-201ENSMUST00000078021 2015 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Chd6A3KFM7 Ism1-202ENSMUST00000184404 2964 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Chd6A3KFM7 Lrrc27-202ENSMUST00000106104 1692 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Chd6A3KFM7 Tbc1d25-204ENSMUST00000172020 2441 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Chd6A3KFM7 1600012H06Rik-202ENSMUST00000164837 2523 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Chd6A3KFM7 Dbnl-203ENSMUST00000109845 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Chd6A3KFM7 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Chd6A3KFM7 Myl3-203ENSMUST00000136695 614 ntAPPRIS ALT2 TSL 3 BASIC13.15□□□□□ -0.3
Chd6A3KFM7 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC13.15□□□□□ -0.3
Chd6A3KFM7 Lsamp-210ENSMUST00000191610 1297 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Chd6A3KFM7 Gm37277-201ENSMUST00000194052 1111 ntBASIC13.15□□□□□ -0.3
Chd6A3KFM7 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Chd6A3KFM7 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Chd6A3KFM7 Glb1-201ENSMUST00000063042 2396 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Chd6A3KFM7 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Chd6A3KFM7 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Chd6A3KFM7 Rtkn-201ENSMUST00000065512 2191 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Chd6A3KFM7 Ccdc149-201ENSMUST00000059428 3295 ntAPPRIS P1 TSL 5 BASIC13.15□□□□□ -0.3
Chd6A3KFM7 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Chd6A3KFM7 Pigw-201ENSMUST00000067058 2675 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Chd6A3KFM7 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC13.14□□□□□ -0.31
Chd6A3KFM7 Gm16897-201ENSMUST00000180780 2492 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Chd6A3KFM7 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Chd6A3KFM7 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Chd6A3KFM7 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC13.14□□□□□ -0.31
Chd6A3KFM7 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC13.14□□□□□ -0.31
Chd6A3KFM7 Lsm2-207ENSMUST00000173004 870 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Chd6A3KFM7 Prr29-203ENSMUST00000185986 983 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Chd6A3KFM7 Gm42722-201ENSMUST00000198855 940 ntTSL 3 BASIC13.14□□□□□ -0.31
Chd6A3KFM7 Hfe-201ENSMUST00000006787 516 ntTSL 5 BASIC13.14□□□□□ -0.31
Chd6A3KFM7 Gzme-201ENSMUST00000089549 916 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Chd6A3KFM7 Hfe-203ENSMUST00000091707 816 ntTSL 5 BASIC13.14□□□□□ -0.31
Chd6A3KFM7 Galnt9-201ENSMUST00000040001 2883 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Chd6A3KFM7 Rasl10b-204ENSMUST00000175848 3249 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Chd6A3KFM7 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC13.14□□□□□ -0.31
Chd6A3KFM7 Fntb-206ENSMUST00000137826 1442 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Chd6A3KFM7 Dexi-203ENSMUST00000184863 2537 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
Chd6A3KFM7 Psmd8-201ENSMUST00000059642 1540 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Chd6A3KFM7 Nudt18-203ENSMUST00000228768 1578 ntBASIC13.14□□□□□ -0.31
Chd6A3KFM7 Gpn3-201ENSMUST00000031420 1592 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Chd6A3KFM7 Gipc2-201ENSMUST00000046614 1596 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Chd6A3KFM7 Ankrd28-201ENSMUST00000014640 6712 ntAPPRIS P2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Chd6A3KFM7 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Chd6A3KFM7 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC13.14□□□□□ -0.31
Chd6A3KFM7 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC13.14□□□□□ -0.31
Chd6A3KFM7 Tbc1d7-202ENSMUST00000179852 1246 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Chd6A3KFM7 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Chd6A3KFM7 Olfr370-201ENSMUST00000058609 1096 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Chd6A3KFM7 Vps53-203ENSMUST00000108419 2209 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Chd6A3KFM7 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Chd6A3KFM7 Ldoc1-201ENSMUST00000075983 1459 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Chd6A3KFM7 Nfil3-201ENSMUST00000071065 2026 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Chd6A3KFM7 Matn4-203ENSMUST00000109358 2056 ntTSL 5 BASIC13.14□□□□□ -0.31
Chd6A3KFM7 Foxf1-201ENSMUST00000181504 2415 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Chd6A3KFM7 Gm12892-201ENSMUST00000117367 1146 ntBASIC13.13□□□□□ -0.31
Chd6A3KFM7 Gng7-205ENSMUST00000118465 875 ntAPPRIS ALT1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Chd6A3KFM7 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Chd6A3KFM7 Rnf170-208ENSMUST00000153528 1026 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Chd6A3KFM7 Gstt4-202ENSMUST00000160211 964 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Chd6A3KFM7 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Chd6A3KFM7 B9d2-202ENSMUST00000205325 593 ntTSL 2 BASIC13.13□□□□□ -0.31
Chd6A3KFM7 Ankrd61-202ENSMUST00000110717 1498 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Chd6A3KFM7 2810425M01Rik-201ENSMUST00000180790 1850 ntTSL 5 BASIC13.13□□□□□ -0.31
Chd6A3KFM7 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC13.13□□□□□ -0.31
Chd6A3KFM7 Gm6745-201ENSMUST00000199216 526 ntBASIC13.13□□□□□ -0.31
Chd6A3KFM7 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC13.13□□□□□ -0.31
Chd6A3KFM7 Gm9172-201ENSMUST00000212092 954 ntBASIC13.13□□□□□ -0.31
Chd6A3KFM7 Polr2j-201ENSMUST00000041366 646 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Chd6A3KFM7 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC13.13□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 39.7 ms