Protein–RNA interactions for Protein: A2AX52

Col6a4, Collagen alpha-4(VI) chain, mousemouse

Predictions only

Length 2,309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a4A2AX52 Gm4459-201ENSMUST00000118750 468 ntBASIC13.66□□□□□ -0.22
Col6a4A2AX52 Meaf6-201ENSMUST00000055213 872 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Col6a4A2AX52 Tjp1-202ENSMUST00000102592 7049 ntAPPRIS P3 TSL 1 (best) BASIC13.66□□□□□ -0.22
Col6a4A2AX52 Crk-203ENSMUST00000108425 4290 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Col6a4A2AX52 Gm42939-201ENSMUST00000197514 2205 ntBASIC13.66□□□□□ -0.22
Col6a4A2AX52 Ptn-201ENSMUST00000101534 1614 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Col6a4A2AX52 Tgfb1-201ENSMUST00000002678 2175 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
Col6a4A2AX52 Gm10505-201ENSMUST00000151398 1587 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
Col6a4A2AX52 Ern1-202ENSMUST00000106799 660 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Col6a4A2AX52 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC13.65□□□□□ -0.22
Col6a4A2AX52 Gm15598-201ENSMUST00000156965 763 ntTSL 5 BASIC13.65□□□□□ -0.22
Col6a4A2AX52 Gm7507-201ENSMUST00000183053 1008 ntBASIC13.65□□□□□ -0.22
Col6a4A2AX52 Bfsp2-201ENSMUST00000124310 1662 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Col6a4A2AX52 Gde1-201ENSMUST00000038791 1582 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Col6a4A2AX52 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC13.65□□□□□ -0.22
Col6a4A2AX52 Gm5682-201ENSMUST00000173402 505 ntBASIC13.65□□□□□ -0.22
Col6a4A2AX52 Higd1a-206ENSMUST00000215300 605 ntAPPRIS P1 TSL 3 BASIC13.65□□□□□ -0.22
Col6a4A2AX52 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Col6a4A2AX52 1700086L19Rik-201ENSMUST00000095617 706 ntBASIC13.65□□□□□ -0.22
Col6a4A2AX52 Layn-201ENSMUST00000098782 1786 ntAPPRIS P2 TSL 5 BASIC13.65□□□□□ -0.22
Col6a4A2AX52 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC13.65□□□□□ -0.22
Col6a4A2AX52 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Col6a4A2AX52 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC13.65□□□□□ -0.22
Col6a4A2AX52 Coq6-201ENSMUST00000021661 1602 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Col6a4A2AX52 Hyls1-201ENSMUST00000115110 1973 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Col6a4A2AX52 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
Col6a4A2AX52 Tbx20-202ENSMUST00000166018 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Col6a4A2AX52 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
Col6a4A2AX52 4921511I17Rik-201ENSMUST00000220545 1341 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
Col6a4A2AX52 Kcns1-201ENSMUST00000045196 2712 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.23
Col6a4A2AX52 Aldh5a1-201ENSMUST00000037615 5647 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Col6a4A2AX52 Pacs1-201ENSMUST00000025786 4339 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Col6a4A2AX52 Gm4913-201ENSMUST00000117075 1290 ntBASIC13.64□□□□□ -0.23
Col6a4A2AX52 Gm11780-201ENSMUST00000136880 516 ntBASIC13.64□□□□□ -0.23
Col6a4A2AX52 Flg-204ENSMUST00000178752 756 ntAPPRIS ALT2 BASIC13.64□□□□□ -0.23
Col6a4A2AX52 Gm3336-201ENSMUST00000179347 1149 ntAPPRIS P2 TSL 5 BASIC13.64□□□□□ -0.23
Col6a4A2AX52 Dnmt3a-ps1-201ENSMUST00000192011 1271 ntBASIC13.64□□□□□ -0.23
Col6a4A2AX52 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC13.64□□□□□ -0.23
Col6a4A2AX52 Gm3336-202ENSMUST00000213065 842 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Col6a4A2AX52 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Col6a4A2AX52 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Col6a4A2AX52 Tmod1-201ENSMUST00000107773 3158 ntAPPRIS P1 TSL 5 BASIC13.64□□□□□ -0.23
Col6a4A2AX52 Kpna4-203ENSMUST00000194558 3726 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Col6a4A2AX52 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Col6a4A2AX52 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Col6a4A2AX52 Cables1-201ENSMUST00000046948 3202 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Col6a4A2AX52 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Col6a4A2AX52 Atp6v1c1-201ENSMUST00000022904 2071 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Col6a4A2AX52 Nsmf-204ENSMUST00000102931 2830 ntTSL 5 BASIC13.64□□□□□ -0.23
Col6a4A2AX52 Nsmf-202ENSMUST00000074422 2824 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Col6a4A2AX52 Cbarp-201ENSMUST00000105369 3121 ntAPPRIS P2 TSL 5 BASIC13.64□□□□□ -0.23
Col6a4A2AX52 Pxn-201ENSMUST00000067268 3706 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
Col6a4A2AX52 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC13.64□□□□□ -0.23
Col6a4A2AX52 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
Col6a4A2AX52 Ctcflos-201ENSMUST00000142165 469 ntTSL 3 BASIC13.64□□□□□ -0.23
Col6a4A2AX52 Gm31545-201ENSMUST00000209358 1219 ntTSL 5 BASIC13.64□□□□□ -0.23
Col6a4A2AX52 Prdm6-203ENSMUST00000115399 2227 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Col6a4A2AX52 Flvcr1-201ENSMUST00000085635 4040 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Col6a4A2AX52 Gjb1-201ENSMUST00000052130 1565 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Col6a4A2AX52 Mif4gd-203ENSMUST00000106507 1656 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Col6a4A2AX52 Adam15-203ENSMUST00000107446 1686 ntTSL 5 BASIC13.64□□□□□ -0.23
Col6a4A2AX52 Ctnnbip1-201ENSMUST00000030839 2674 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Col6a4A2AX52 Tmem131l-201ENSMUST00000052342 4815 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
Col6a4A2AX52 Lhfpl4-201ENSMUST00000162280 4762 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
Col6a4A2AX52 Ddhd1-203ENSMUST00000111828 9802 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
Col6a4A2AX52 Mta1-201ENSMUST00000009099 2826 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Col6a4A2AX52 Mepce-201ENSMUST00000031740 3128 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Col6a4A2AX52 Cds1-201ENSMUST00000031273 3924 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Col6a4A2AX52 Elac2-201ENSMUST00000071891 2771 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Col6a4A2AX52 Enah-210ENSMUST00000193074 1971 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
Col6a4A2AX52 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC13.63□□□□□ -0.23
Col6a4A2AX52 Tspan31-201ENSMUST00000060991 1556 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Col6a4A2AX52 Arpc1b-211ENSMUST00000196111 1394 ntAPPRIS ALT1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Col6a4A2AX52 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC13.63□□□□□ -0.23
Col6a4A2AX52 BC048679-202ENSMUST00000144156 640 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Col6a4A2AX52 BC022687-202ENSMUST00000177808 1207 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Col6a4A2AX52 Gm15743-202ENSMUST00000182690 1901 ntBASIC13.63□□□□□ -0.23
Col6a4A2AX52 Zxdc-202ENSMUST00000075117 4126 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Col6a4A2AX52 Adgrv1-207ENSMUST00000128585 2580 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Col6a4A2AX52 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Col6a4A2AX52 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC13.63□□□□□ -0.23
Col6a4A2AX52 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Col6a4A2AX52 Gm9954-202ENSMUST00000198686 4725 ntBASIC13.63□□□□□ -0.23
Col6a4A2AX52 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Col6a4A2AX52 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Col6a4A2AX52 Cdv3-201ENSMUST00000035484 3387 ntAPPRIS P3 TSL 1 (best) BASIC13.63□□□□□ -0.23
Col6a4A2AX52 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Col6a4A2AX52 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Col6a4A2AX52 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Col6a4A2AX52 4930593A02Rik-202ENSMUST00000203879 938 ntTSL 5 BASIC13.63□□□□□ -0.23
Col6a4A2AX52 Gm5186-201ENSMUST00000218781 920 ntBASIC13.63□□□□□ -0.23
Col6a4A2AX52 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC13.63□□□□□ -0.23
Col6a4A2AX52 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Col6a4A2AX52 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Col6a4A2AX52 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Col6a4A2AX52 Lca5l-201ENSMUST00000054855 2508 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Col6a4A2AX52 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC13.63□□□□□ -0.23
Col6a4A2AX52 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Col6a4A2AX52 Itgb1bp1-201ENSMUST00000076260 1874 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Col6a4A2AX52 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 21.1 ms