Protein–RNA interactions for Protein: A0N8R1

Trav12-1, T cell receptor alpha variable 12-1 (Fragment), mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav12-1A0N8R1 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav12-1A0N8R1 Cbl-204ENSMUST00000205968 2809 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Trav12-1A0N8R1 Adgrl1-201ENSMUST00000045393 5643 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Trav12-1A0N8R1 Cd82-205ENSMUST00000116457 1683 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav12-1A0N8R1 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav12-1A0N8R1 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav12-1A0N8R1 Helt-201ENSMUST00000058636 1541 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav12-1A0N8R1 Cenpw-201ENSMUST00000099985 1532 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav12-1A0N8R1 Clvs2-203ENSMUST00000160299 2610 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Trav12-1A0N8R1 Igdcc3-203ENSMUST00000217371 3183 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Trav12-1A0N8R1 Opa3-202ENSMUST00000161711 1390 ntAPPRIS ALT2 TSL 2 BASIC13.58□□□□□ -0.23
Trav12-1A0N8R1 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Trav12-1A0N8R1 Hexb-201ENSMUST00000022169 1905 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Trav12-1A0N8R1 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.23
Trav12-1A0N8R1 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Trav12-1A0N8R1 Rgp1-203ENSMUST00000117140 1635 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Trav12-1A0N8R1 Ruvbl2-201ENSMUST00000107771 1834 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav12-1A0N8R1 Efnb3-201ENSMUST00000004036 3183 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav12-1A0N8R1 Atg7-215ENSMUST00000183165 2012 ntTSL 5 BASIC13.58□□□□□ -0.24
Trav12-1A0N8R1 Rgl1-201ENSMUST00000027760 4572 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Trav12-1A0N8R1 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC13.58□□□□□ -0.24
Trav12-1A0N8R1 Gm12669-201ENSMUST00000122162 1009 ntBASIC13.58□□□□□ -0.24
Trav12-1A0N8R1 Gm14453-201ENSMUST00000139677 553 ntTSL 3 BASIC13.58□□□□□ -0.24
Trav12-1A0N8R1 Gm17035-201ENSMUST00000170557 419 ntTSL 3 BASIC13.58□□□□□ -0.24
Trav12-1A0N8R1 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Trav12-1A0N8R1 Gm36967-201ENSMUST00000193814 266 ntBASIC13.58□□□□□ -0.24
Trav12-1A0N8R1 Gm21057-201ENSMUST00000206022 670 ntTSL 3 BASIC13.58□□□□□ -0.24
Trav12-1A0N8R1 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav12-1A0N8R1 Rprml-201ENSMUST00000057870 1010 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
Trav12-1A0N8R1 Olfr464-201ENSMUST00000074874 1084 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
Trav12-1A0N8R1 Rbck1-201ENSMUST00000028964 2252 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav12-1A0N8R1 Serf2-204ENSMUST00000139253 3056 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav12-1A0N8R1 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Trav12-1A0N8R1 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav12-1A0N8R1 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
Trav12-1A0N8R1 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Trav12-1A0N8R1 Gm7008-201ENSMUST00000038121 1366 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Trav12-1A0N8R1 Eif4a2-201ENSMUST00000023599 2208 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Trav12-1A0N8R1 Pcdh1-203ENSMUST00000160721 5416 ntTSL 5 BASIC13.57□□□□□ -0.24
Trav12-1A0N8R1 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav12-1A0N8R1 Tmem183a-201ENSMUST00000049470 3149 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav12-1A0N8R1 Bcor-203ENSMUST00000115512 6887 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav12-1A0N8R1 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav12-1A0N8R1 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav12-1A0N8R1 Rsrc1-205ENSMUST00000161726 3213 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav12-1A0N8R1 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC13.57□□□□□ -0.24
Trav12-1A0N8R1 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Trav12-1A0N8R1 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav12-1A0N8R1 Tnfrsf1a-201ENSMUST00000032491 2156 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav12-1A0N8R1 Tom1l2-201ENSMUST00000064019 2151 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Trav12-1A0N8R1 Rmdn1-201ENSMUST00000029888 1734 ntAPPRIS P2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav12-1A0N8R1 Gm17041-201ENSMUST00000163196 479 ntTSL 3 BASIC13.57□□□□□ -0.24
Trav12-1A0N8R1 Rcbtb2-217ENSMUST00000167401 868 ntTSL 5 BASIC13.57□□□□□ -0.24
Trav12-1A0N8R1 Mir5122-201ENSMUST00000175004 89 ntBASIC13.57□□□□□ -0.24
Trav12-1A0N8R1 Cenps-207ENSMUST00000177408 689 ntTSL 2 BASIC13.57□□□□□ -0.24
Trav12-1A0N8R1 Gm4217-201ENSMUST00000182243 1002 ntBASIC13.57□□□□□ -0.24
Trav12-1A0N8R1 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav12-1A0N8R1 Gng11-201ENSMUST00000031670 919 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav12-1A0N8R1 Crabp1-201ENSMUST00000034830 802 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav12-1A0N8R1 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav12-1A0N8R1 Fxn-201ENSMUST00000081333 1114 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav12-1A0N8R1 Gzmd-201ENSMUST00000082093 964 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav12-1A0N8R1 Rad51d-203ENSMUST00000092844 1228 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Trav12-1A0N8R1 Slmap-212ENSMUST00000139075 4508 ntAPPRIS ALT2 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav12-1A0N8R1 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav12-1A0N8R1 Mindy4-203ENSMUST00000204842 2211 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Trav12-1A0N8R1 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC13.57□□□□□ -0.24
Trav12-1A0N8R1 Cog8-201ENSMUST00000034391 2954 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav12-1A0N8R1 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav12-1A0N8R1 Pdlim5-211ENSMUST00000198381 1555 ntAPPRIS ALT2 TSL 5 BASIC13.57□□□□□ -0.24
Trav12-1A0N8R1 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav12-1A0N8R1 Bcor-202ENSMUST00000065143 6839 ntAPPRIS P4 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav12-1A0N8R1 Rogdi-207ENSMUST00000202281 1355 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav12-1A0N8R1 Inhbc-201ENSMUST00000026472 1859 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav12-1A0N8R1 N6amt1-201ENSMUST00000054442 1884 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav12-1A0N8R1 Zfp740-202ENSMUST00000119168 3932 ntTSL 1 (best) BASIC13.57□□□□□ -0.24
Trav12-1A0N8R1 Cnih3-201ENSMUST00000027795 2668 ntAPPRIS P1 TSL 1 (best) BASIC13.57□□□□□ -0.24
Trav12-1A0N8R1 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav12-1A0N8R1 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC13.56□□□□□ -0.24
Trav12-1A0N8R1 Madcam1-201ENSMUST00000020554 1436 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav12-1A0N8R1 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav12-1A0N8R1 Mrm2-201ENSMUST00000031536 1443 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav12-1A0N8R1 Rgl2-201ENSMUST00000047503 3252 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav12-1A0N8R1 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav12-1A0N8R1 Nedd4l-202ENSMUST00000163516 8163 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Trav12-1A0N8R1 Npdc1-202ENSMUST00000071442 1485 ntAPPRIS P2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav12-1A0N8R1 Miga1-205ENSMUST00000199397 2842 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Trav12-1A0N8R1 Shank3-202ENSMUST00000066545 4702 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Trav12-1A0N8R1 Tmem65-201ENSMUST00000072113 3747 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav12-1A0N8R1 Atp5g1-202ENSMUST00000107684 596 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav12-1A0N8R1 Romo1-202ENSMUST00000109597 550 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav12-1A0N8R1 Atf7ip2-204ENSMUST00000119023 1048 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Trav12-1A0N8R1 Gm18421-201ENSMUST00000204122 625 ntBASIC13.56□□□□□ -0.24
Trav12-1A0N8R1 D030044L04Rik-201ENSMUST00000204220 1291 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Trav12-1A0N8R1 Cox4i1-201ENSMUST00000034276 745 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav12-1A0N8R1 Aprt-201ENSMUST00000006764 849 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav12-1A0N8R1 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Trav12-1A0N8R1 Fam214b-204ENSMUST00000107958 3280 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav12-1A0N8R1 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trav12-1A0N8R1 Fzd5-201ENSMUST00000063982 6915 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 37.7 ms