Protein–RNA interactions for Protein: A0A1W2P7H6

Mindy4b-ps, MINDY lysine 48 deubiquitinase 4B, pseudogene, mousemouse

Predictions only

Length 457 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Mindy4b-psA0A1W2P7H6 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
Mindy4b-psA0A1W2P7H6 Homer2-206ENSMUST00000207983 1634 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
Mindy4b-psA0A1W2P7H6 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Mindy4b-psA0A1W2P7H6 Mgat1-201ENSMUST00000081794 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Mindy4b-psA0A1W2P7H6 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Mindy4b-psA0A1W2P7H6 Gbe1-201ENSMUST00000023393 2846 ntAPPRIS ALT2 TSL 5 BASIC17.15■□□□□ 0.34
Mindy4b-psA0A1W2P7H6 Selenoh-201ENSMUST00000102646 783 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Mindy4b-psA0A1W2P7H6 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Mindy4b-psA0A1W2P7H6 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Mindy4b-psA0A1W2P7H6 Gm16295-201ENSMUST00000139512 643 ntTSL 3 BASIC17.15■□□□□ 0.34
Mindy4b-psA0A1W2P7H6 Selenoh-206ENSMUST00000189988 390 ntTSL 3 BASIC17.15■□□□□ 0.34
Mindy4b-psA0A1W2P7H6 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Mindy4b-psA0A1W2P7H6 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Mindy4b-psA0A1W2P7H6 Gdpd5-201ENSMUST00000037528 4611 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Mindy4b-psA0A1W2P7H6 Rnpep-202ENSMUST00000077340 2288 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Mindy4b-psA0A1W2P7H6 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Mindy4b-psA0A1W2P7H6 H2-Q10-202ENSMUST00000174525 1991 ntAPPRIS P1 TSL 5 BASIC17.15■□□□□ 0.34
Mindy4b-psA0A1W2P7H6 Pole4-201ENSMUST00000095786 1769 ntAPPRIS P2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Mindy4b-psA0A1W2P7H6 Zmynd15-203ENSMUST00000108563 2649 ntAPPRIS ALT2 TSL 1 (best) BASIC17.15■□□□□ 0.34
Mindy4b-psA0A1W2P7H6 Gm16867-201ENSMUST00000179116 3084 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
Mindy4b-psA0A1W2P7H6 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.34
Mindy4b-psA0A1W2P7H6 Znrf1-201ENSMUST00000095176 3108 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.34
Mindy4b-psA0A1W2P7H6 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Mindy4b-psA0A1W2P7H6 Prdm5-201ENSMUST00000031973 1488 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Mindy4b-psA0A1W2P7H6 Khsrp-201ENSMUST00000007814 3990 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Mindy4b-psA0A1W2P7H6 Ankrd17-202ENSMUST00000081914 8057 ntAPPRIS ALT2 TSL 5 BASIC17.14■□□□□ 0.33
Mindy4b-psA0A1W2P7H6 Comp-201ENSMUST00000003659 2416 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Mindy4b-psA0A1W2P7H6 Gm12216-201ENSMUST00000117316 1152 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Mindy4b-psA0A1W2P7H6 Gm15372-201ENSMUST00000120729 834 ntBASIC17.14■□□□□ 0.33
Mindy4b-psA0A1W2P7H6 Flg-202ENSMUST00000178008 768 ntAPPRIS ALT2 BASIC17.14■□□□□ 0.33
Mindy4b-psA0A1W2P7H6 Flg-205ENSMUST00000179250 765 ntAPPRIS ALT2 BASIC17.14■□□□□ 0.33
Mindy4b-psA0A1W2P7H6 Flg-206ENSMUST00000179477 768 ntAPPRIS ALT2 BASIC17.14■□□□□ 0.33
Mindy4b-psA0A1W2P7H6 AC159641.1-201ENSMUST00000221117 177 ntTSL 3 BASIC17.14■□□□□ 0.33
Mindy4b-psA0A1W2P7H6 Slc25a43-201ENSMUST00000047655 1111 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Mindy4b-psA0A1W2P7H6 Sult2b1-201ENSMUST00000075571 1193 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Mindy4b-psA0A1W2P7H6 Ccdc51-201ENSMUST00000026735 1526 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Mindy4b-psA0A1W2P7H6 Cul1-201ENSMUST00000031697 3161 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Mindy4b-psA0A1W2P7H6 Snx2-201ENSMUST00000037850 2013 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Mindy4b-psA0A1W2P7H6 Xpr1-202ENSMUST00000111774 2753 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Mindy4b-psA0A1W2P7H6 Lrch3-211ENSMUST00000170899 2752 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Mindy4b-psA0A1W2P7H6 Plekha4-202ENSMUST00000209517 2577 ntAPPRIS P2 TSL 5 BASIC17.14■□□□□ 0.33
Mindy4b-psA0A1W2P7H6 Sgpp1-201ENSMUST00000021450 3323 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Mindy4b-psA0A1W2P7H6 Klhl40-201ENSMUST00000098272 2370 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Mindy4b-psA0A1W2P7H6 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Mindy4b-psA0A1W2P7H6 A530084C06Rik-201ENSMUST00000170573 3200 ntAPPRIS P1 BASIC17.13■□□□□ 0.33
Mindy4b-psA0A1W2P7H6 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC17.13■□□□□ 0.33
Mindy4b-psA0A1W2P7H6 Chn1-209ENSMUST00000166199 3876 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Mindy4b-psA0A1W2P7H6 E2f2-201ENSMUST00000061721 4739 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Mindy4b-psA0A1W2P7H6 Trim67-202ENSMUST00000167588 8735 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Mindy4b-psA0A1W2P7H6 Chchd2-ps-201ENSMUST00000117487 462 ntBASIC17.13■□□□□ 0.33
Mindy4b-psA0A1W2P7H6 Gm11729-201ENSMUST00000124901 713 ntTSL 3 BASIC17.13■□□□□ 0.33
Mindy4b-psA0A1W2P7H6 Tmem178b-203ENSMUST00000180886 712 ntTSL 5 BASIC17.13■□□□□ 0.33
Mindy4b-psA0A1W2P7H6 Gm17971-201ENSMUST00000190239 806 ntBASIC17.13■□□□□ 0.33
Mindy4b-psA0A1W2P7H6 Gm44454-201ENSMUST00000198541 138 ntBASIC17.13■□□□□ 0.33
Mindy4b-psA0A1W2P7H6 Gm40457-201ENSMUST00000205319 1174 ntTSL 5 BASIC17.13■□□□□ 0.33
Mindy4b-psA0A1W2P7H6 AC108846.1-201ENSMUST00000214531 513 ntBASIC17.13■□□□□ 0.33
Mindy4b-psA0A1W2P7H6 Tomm22-201ENSMUST00000023062 1031 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Mindy4b-psA0A1W2P7H6 Cbr2-201ENSMUST00000026148 1110 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Mindy4b-psA0A1W2P7H6 Pdcd2l-201ENSMUST00000002710 1295 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Mindy4b-psA0A1W2P7H6 Lrch3-203ENSMUST00000135193 2794 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Mindy4b-psA0A1W2P7H6 Mamstr-201ENSMUST00000148532 1606 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Mindy4b-psA0A1W2P7H6 Gpc3-201ENSMUST00000069360 2216 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Mindy4b-psA0A1W2P7H6 A930017K11Rik-201ENSMUST00000162431 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Mindy4b-psA0A1W2P7H6 Tbc1d9-201ENSMUST00000034145 4631 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Mindy4b-psA0A1W2P7H6 Snph-203ENSMUST00000109875 4910 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Mindy4b-psA0A1W2P7H6 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Mindy4b-psA0A1W2P7H6 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC17.13■□□□□ 0.33
Mindy4b-psA0A1W2P7H6 Haglr-201ENSMUST00000100000 2085 ntBASIC17.12■□□□□ 0.33
Mindy4b-psA0A1W2P7H6 Stxbp3-201ENSMUST00000102621 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Mindy4b-psA0A1W2P7H6 Kcnq2-201ENSMUST00000016491 3067 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Mindy4b-psA0A1W2P7H6 Prmt9-202ENSMUST00000118622 2768 ntAPPRIS ALT2 TSL 5 BASIC17.12■□□□□ 0.33
Mindy4b-psA0A1W2P7H6 Inhba-202ENSMUST00000164993 1529 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Mindy4b-psA0A1W2P7H6 Robo3-202ENSMUST00000115038 4797 ntAPPRIS P2 TSL 5 BASIC17.12■□□□□ 0.33
Mindy4b-psA0A1W2P7H6 1810041L15Rik-203ENSMUST00000189248 5296 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Mindy4b-psA0A1W2P7H6 Cldn7-203ENSMUST00000108596 664 ntTSL 3 BASIC17.12■□□□□ 0.33
Mindy4b-psA0A1W2P7H6 C130032M10Rik-201ENSMUST00000180393 728 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Mindy4b-psA0A1W2P7H6 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Mindy4b-psA0A1W2P7H6 Spr-ps1-201ENSMUST00000089584 605 ntBASIC17.12■□□□□ 0.33
Mindy4b-psA0A1W2P7H6 Synpo-201ENSMUST00000097566 5060 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Mindy4b-psA0A1W2P7H6 Cd302-202ENSMUST00000074606 1354 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Mindy4b-psA0A1W2P7H6 Vgf-201ENSMUST00000041543 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Mindy4b-psA0A1W2P7H6 Neurl1a-202ENSMUST00000111808 4157 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Mindy4b-psA0A1W2P7H6 Txndc11-201ENSMUST00000038424 3095 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Mindy4b-psA0A1W2P7H6 Gm6858-201ENSMUST00000208582 1468 ntBASIC17.12■□□□□ 0.33
Mindy4b-psA0A1W2P7H6 Dyx1c1-201ENSMUST00000034734 1975 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Mindy4b-psA0A1W2P7H6 Tubb4b-201ENSMUST00000043584 1598 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Mindy4b-psA0A1W2P7H6 Gm3248-201ENSMUST00000163885 2055 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Mindy4b-psA0A1W2P7H6 Cnppd1-208ENSMUST00000190679 2062 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Mindy4b-psA0A1W2P7H6 Lsm1-201ENSMUST00000038421 2663 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Mindy4b-psA0A1W2P7H6 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Mindy4b-psA0A1W2P7H6 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC17.11■□□□□ 0.33
Mindy4b-psA0A1W2P7H6 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
Mindy4b-psA0A1W2P7H6 Gmnn-202ENSMUST00000110382 963 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Mindy4b-psA0A1W2P7H6 Pgam1-ps2-201ENSMUST00000117129 765 ntBASIC17.11■□□□□ 0.33
Mindy4b-psA0A1W2P7H6 Gm12963-201ENSMUST00000131846 783 ntTSL 5 BASIC17.11■□□□□ 0.33
Mindy4b-psA0A1W2P7H6 Lzts2-203ENSMUST00000179108 2781 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Mindy4b-psA0A1W2P7H6 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Mindy4b-psA0A1W2P7H6 AC132265.1-201ENSMUST00000219233 1665 ntBASIC17.1■□□□□ 0.33
Mindy4b-psA0A1W2P7H6 AC115863.1-201ENSMUST00000214815 1813 ntBASIC17.1■□□□□ 0.33
Mindy4b-psA0A1W2P7H6 Naprt-201ENSMUST00000023237 1890 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 48.6 ms