Protein–RNA interactions for Protein: A0A0G2JGQ7

Trav15d-2-dv6d-2, T cell receptor alpha variable 15D-2-DV6D-2 (Fragment), mousemouse

Predictions only

Length 117 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15d-2-dv6d-2A0A0G2JGQ7 Hist1h2ac-201ENSMUST00000171127 2482 ntAPPRIS P1 BASIC14.26□□□□□ -0.13
Trav15d-2-dv6d-2A0A0G2JGQ7 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav15d-2-dv6d-2A0A0G2JGQ7 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav15d-2-dv6d-2A0A0G2JGQ7 Erg-207ENSMUST00000171646 1519 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Trav15d-2-dv6d-2A0A0G2JGQ7 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav15d-2-dv6d-2A0A0G2JGQ7 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav15d-2-dv6d-2A0A0G2JGQ7 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav15d-2-dv6d-2A0A0G2JGQ7 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC14.26□□□□□ -0.13
Trav15d-2-dv6d-2A0A0G2JGQ7 Mif4gd-201ENSMUST00000021087 1372 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav15d-2-dv6d-2A0A0G2JGQ7 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm13446-201ENSMUST00000124555 2033 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Trav15d-2-dv6d-2A0A0G2JGQ7 Ero1lb-203ENSMUST00000221560 1964 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Trav15d-2-dv6d-2A0A0G2JGQ7 Tmem170-201ENSMUST00000034431 3878 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav15d-2-dv6d-2A0A0G2JGQ7 Tfap2b-202ENSMUST00000064976 1946 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Trav15d-2-dv6d-2A0A0G2JGQ7 Rpl18-ps2-201ENSMUST00000118863 567 ntBASIC14.26□□□□□ -0.13
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm13436-201ENSMUST00000120418 567 ntBASIC14.26□□□□□ -0.13
Trav15d-2-dv6d-2A0A0G2JGQ7 Zfp629-207ENSMUST00000134446 670 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Trav15d-2-dv6d-2A0A0G2JGQ7 Creb1-203ENSMUST00000171164 1287 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm2479-201ENSMUST00000173312 1053 ntTSL 3 BASIC14.26□□□□□ -0.13
Trav15d-2-dv6d-2A0A0G2JGQ7 Myl6-206ENSMUST00000218127 691 ntAPPRIS ALT1 TSL 2 BASIC14.26□□□□□ -0.13
Trav15d-2-dv6d-2A0A0G2JGQ7 Pldi-201ENSMUST00000036304 853 ntTSL 2 BASIC14.26□□□□□ -0.13
Trav15d-2-dv6d-2A0A0G2JGQ7 Ptcra-201ENSMUST00000041012 1283 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav15d-2-dv6d-2A0A0G2JGQ7 Tdg-201ENSMUST00000092266 2959 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav15d-2-dv6d-2A0A0G2JGQ7 Rgma-204ENSMUST00000139780 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav15d-2-dv6d-2A0A0G2JGQ7 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav15d-2-dv6d-2A0A0G2JGQ7 C130073E24Rik-201ENSMUST00000210222 6144 ntTSL 5 BASIC14.26□□□□□ -0.13
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Trav15d-2-dv6d-2A0A0G2JGQ7 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Trav15d-2-dv6d-2A0A0G2JGQ7 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Trav15d-2-dv6d-2A0A0G2JGQ7 Gusb-203ENSMUST00000111308 2038 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Trav15d-2-dv6d-2A0A0G2JGQ7 Syt3-202ENSMUST00000118962 2494 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Trav15d-2-dv6d-2A0A0G2JGQ7 Nr1h2-203ENSMUST00000107911 1988 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav15d-2-dv6d-2A0A0G2JGQ7 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav15d-2-dv6d-2A0A0G2JGQ7 Tes-202ENSMUST00000115467 2440 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm32996-201ENSMUST00000199828 1447 ntBASIC14.25□□□□□ -0.13
Trav15d-2-dv6d-2A0A0G2JGQ7 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav15d-2-dv6d-2A0A0G2JGQ7 H6pd-201ENSMUST00000030830 4745 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav15d-2-dv6d-2A0A0G2JGQ7 Ager-201ENSMUST00000015596 1370 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav15d-2-dv6d-2A0A0G2JGQ7 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC14.25□□□□□ -0.13
Trav15d-2-dv6d-2A0A0G2JGQ7 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav15d-2-dv6d-2A0A0G2JGQ7 Ubr3-202ENSMUST00000112251 8081 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm16011-201ENSMUST00000121567 2662 ntBASIC14.25□□□□□ -0.13
Trav15d-2-dv6d-2A0A0G2JGQ7 E330011M16Rik-201ENSMUST00000193614 1794 ntBASIC14.25□□□□□ -0.13
Trav15d-2-dv6d-2A0A0G2JGQ7 Dmpk-202ENSMUST00000108473 2588 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav15d-2-dv6d-2A0A0G2JGQ7 Wscd1-202ENSMUST00000108510 2956 ntAPPRIS P1 TSL 5 BASIC14.25□□□□□ -0.13
Trav15d-2-dv6d-2A0A0G2JGQ7 4930515G01Rik-201ENSMUST00000173208 1247 ntBASIC14.25□□□□□ -0.13
Trav15d-2-dv6d-2A0A0G2JGQ7 5430416N02Rik-202ENSMUST00000181873 626 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm37055-201ENSMUST00000191866 133 ntBASIC14.25□□□□□ -0.13
Trav15d-2-dv6d-2A0A0G2JGQ7 Rpl18-204ENSMUST00000209693 535 ntTSL 5 BASIC14.25□□□□□ -0.13
Trav15d-2-dv6d-2A0A0G2JGQ7 Wapl-201ENSMUST00000048263 6351 ntAPPRIS P3 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav15d-2-dv6d-2A0A0G2JGQ7 Prok1-201ENSMUST00000049852 813 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav15d-2-dv6d-2A0A0G2JGQ7 Mfap2-201ENSMUST00000071977 1073 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav15d-2-dv6d-2A0A0G2JGQ7 Zbtb16-202ENSMUST00000216150 2505 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav15d-2-dv6d-2A0A0G2JGQ7 Lias-202ENSMUST00000122026 1668 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav15d-2-dv6d-2A0A0G2JGQ7 Ocel1-201ENSMUST00000002469 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav15d-2-dv6d-2A0A0G2JGQ7 Bcam-201ENSMUST00000003061 2429 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav15d-2-dv6d-2A0A0G2JGQ7 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC14.25□□□□□ -0.13
Trav15d-2-dv6d-2A0A0G2JGQ7 Cd40-202ENSMUST00000073707 1596 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm26821-201ENSMUST00000181954 2652 ntTSL 5 BASIC14.25□□□□□ -0.13
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm42473-201ENSMUST00000201056 2291 ntBASIC14.25□□□□□ -0.13
Trav15d-2-dv6d-2A0A0G2JGQ7 Nap1l4-201ENSMUST00000072727 2285 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Trav15d-2-dv6d-2A0A0G2JGQ7 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC14.25□□□□□ -0.13
Trav15d-2-dv6d-2A0A0G2JGQ7 Gtf3a-201ENSMUST00000132102 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav15d-2-dv6d-2A0A0G2JGQ7 4933436I20Rik-201ENSMUST00000189405 1434 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trav15d-2-dv6d-2A0A0G2JGQ7 AC153526.5-201ENSMUST00000218661 2147 ntBASIC14.24□□□□□ -0.13
Trav15d-2-dv6d-2A0A0G2JGQ7 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav15d-2-dv6d-2A0A0G2JGQ7 Tll1-201ENSMUST00000066166 4767 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav15d-2-dv6d-2A0A0G2JGQ7 Nfkbid-202ENSMUST00000108175 2000 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav15d-2-dv6d-2A0A0G2JGQ7 Stxbp5l-202ENSMUST00000114775 1691 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trav15d-2-dv6d-2A0A0G2JGQ7 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trav15d-2-dv6d-2A0A0G2JGQ7 Tubgcp4-202ENSMUST00000110657 1992 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trav15d-2-dv6d-2A0A0G2JGQ7 Kcna6-204ENSMUST00000185333 5836 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav15d-2-dv6d-2A0A0G2JGQ7 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Trav15d-2-dv6d-2A0A0G2JGQ7 Znhit2-201ENSMUST00000162726 1281 ntAPPRIS P1 BASIC14.24□□□□□ -0.13
Trav15d-2-dv6d-2A0A0G2JGQ7 Prlh-201ENSMUST00000166281 276 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav15d-2-dv6d-2A0A0G2JGQ7 Gm42884-202ENSMUST00000202523 423 ntTSL 3 BASIC14.24□□□□□ -0.13
Trav15d-2-dv6d-2A0A0G2JGQ7 6530437J22Rik-201ENSMUST00000207515 773 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trav15d-2-dv6d-2A0A0G2JGQ7 Pdcd2-201ENSMUST00000054450 1120 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav15d-2-dv6d-2A0A0G2JGQ7 Elp6-201ENSMUST00000068071 2219 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trav15d-2-dv6d-2A0A0G2JGQ7 Rabggta-203ENSMUST00000169237 2547 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav15d-2-dv6d-2A0A0G2JGQ7 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC14.24□□□□□ -0.13
Trav15d-2-dv6d-2A0A0G2JGQ7 Fa2h-201ENSMUST00000038475 2492 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav15d-2-dv6d-2A0A0G2JGQ7 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
Trav15d-2-dv6d-2A0A0G2JGQ7 Casq1-201ENSMUST00000003554 1847 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav15d-2-dv6d-2A0A0G2JGQ7 Cep152-201ENSMUST00000089776 5768 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav15d-2-dv6d-2A0A0G2JGQ7 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC14.24□□□□□ -0.13
Trav15d-2-dv6d-2A0A0G2JGQ7 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav15d-2-dv6d-2A0A0G2JGQ7 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav15d-2-dv6d-2A0A0G2JGQ7 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trav15d-2-dv6d-2A0A0G2JGQ7 Ank1-209ENSMUST00000121802 8218 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav15d-2-dv6d-2A0A0G2JGQ7 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
Trav15d-2-dv6d-2A0A0G2JGQ7 Galnt18-201ENSMUST00000049430 2575 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trav15d-2-dv6d-2A0A0G2JGQ7 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
Trav15d-2-dv6d-2A0A0G2JGQ7 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
Trav15d-2-dv6d-2A0A0G2JGQ7 Dpagt1-201ENSMUST00000054708 2205 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav15d-2-dv6d-2A0A0G2JGQ7 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
Trav15d-2-dv6d-2A0A0G2JGQ7 Ankrd50-202ENSMUST00000120875 4945 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav15d-2-dv6d-2A0A0G2JGQ7 Taf5l-202ENSMUST00000165628 2973 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav15d-2-dv6d-2A0A0G2JGQ7 Sacs-204ENSMUST00000121091 4581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
Trav15d-2-dv6d-2A0A0G2JGQ7 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC14.23□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 31.7 ms