Protein–RNA interactions for Protein: A0A0G2JFX3

Trav13d-4, T cell receptor alpha variable 13D-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-4A0A0G2JFX3 AK157302-201ENSMUST00000104942 1924 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
Trav13d-4A0A0G2JFX3 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav13d-4A0A0G2JFX3 Gm5643-201ENSMUST00000117081 966 ntBASIC11.22□□□□□ -0.61
Trav13d-4A0A0G2JFX3 Gm12527-201ENSMUST00000117967 564 ntBASIC11.22□□□□□ -0.61
Trav13d-4A0A0G2JFX3 Stmn4-202ENSMUST00000118426 1281 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Trav13d-4A0A0G2JFX3 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav13d-4A0A0G2JFX3 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC11.22□□□□□ -0.61
Trav13d-4A0A0G2JFX3 Gm26663-201ENSMUST00000181105 1882 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Trav13d-4A0A0G2JFX3 Gm37437-201ENSMUST00000194451 1937 ntBASIC11.22□□□□□ -0.61
Trav13d-4A0A0G2JFX3 Snx8-204ENSMUST00000196130 2547 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav13d-4A0A0G2JFX3 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav13d-4A0A0G2JFX3 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC11.22□□□□□ -0.61
Trav13d-4A0A0G2JFX3 Wnt10b-204ENSMUST00000226655 1807 ntBASIC11.22□□□□□ -0.61
Trav13d-4A0A0G2JFX3 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav13d-4A0A0G2JFX3 Itga8-201ENSMUST00000028106 5812 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav13d-4A0A0G2JFX3 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav13d-4A0A0G2JFX3 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav13d-4A0A0G2JFX3 Hnrnpa1-202ENSMUST00000087351 1759 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav13d-4A0A0G2JFX3 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav13d-4A0A0G2JFX3 Gm10638-201ENSMUST00000098532 905 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
Trav13d-4A0A0G2JFX3 Gigyf1-201ENSMUST00000031727 5440 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav13d-4A0A0G2JFX3 Grm6-204ENSMUST00000171427 4330 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Trav13d-4A0A0G2JFX3 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav13d-4A0A0G2JFX3 Slc4a4-207ENSMUST00000148750 7931 ntAPPRIS P3 TSL 5 BASIC11.22□□□□□ -0.61
Trav13d-4A0A0G2JFX3 Senp7-211ENSMUST00000202000 3218 ntTSL 2 BASIC11.22□□□□□ -0.61
Trav13d-4A0A0G2JFX3 Fam83f-201ENSMUST00000023044 2988 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav13d-4A0A0G2JFX3 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav13d-4A0A0G2JFX3 Aptx-202ENSMUST00000068125 5383 ntAPPRIS P4 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav13d-4A0A0G2JFX3 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Trav13d-4A0A0G2JFX3 Trmt2a-203ENSMUST00000115640 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trav13d-4A0A0G2JFX3 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Trav13d-4A0A0G2JFX3 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
Trav13d-4A0A0G2JFX3 Ctsd-202ENSMUST00000151120 2127 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trav13d-4A0A0G2JFX3 Hira-202ENSMUST00000120532 2063 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Trav13d-4A0A0G2JFX3 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trav13d-4A0A0G2JFX3 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trav13d-4A0A0G2JFX3 Nkain2-203ENSMUST00000191234 3760 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trav13d-4A0A0G2JFX3 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trav13d-4A0A0G2JFX3 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trav13d-4A0A0G2JFX3 Gm7712-202ENSMUST00000222331 1510 ntBASIC11.21□□□□□ -0.61
Trav13d-4A0A0G2JFX3 Atp13a3-201ENSMUST00000061350 7220 ntAPPRIS ALT2 TSL 5 BASIC11.21□□□□□ -0.61
Trav13d-4A0A0G2JFX3 Vegfa-201ENSMUST00000024747 2765 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Trav13d-4A0A0G2JFX3 Zswim1-201ENSMUST00000017908 2705 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trav13d-4A0A0G2JFX3 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC11.21□□□□□ -0.61
Trav13d-4A0A0G2JFX3 2900072N19Rik-201ENSMUST00000123840 806 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Trav13d-4A0A0G2JFX3 Gm13647-201ENSMUST00000154654 622 ntTSL 5 BASIC11.21□□□□□ -0.61
Trav13d-4A0A0G2JFX3 Gm10698-201ENSMUST00000182663 604 ntBASIC11.21□□□□□ -0.61
Trav13d-4A0A0G2JFX3 Gm37939-201ENSMUST00000192309 447 ntTSL 5 BASIC11.21□□□□□ -0.61
Trav13d-4A0A0G2JFX3 Dctn3-201ENSMUST00000030158 973 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trav13d-4A0A0G2JFX3 Guca1a-201ENSMUST00000059348 871 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trav13d-4A0A0G2JFX3 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trav13d-4A0A0G2JFX3 Crk-201ENSMUST00000017920 3642 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trav13d-4A0A0G2JFX3 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Trav13d-4A0A0G2JFX3 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC11.21□□□□□ -0.62
Trav13d-4A0A0G2JFX3 Pccb-204ENSMUST00000149322 2188 ntTSL 1 (best) BASIC11.21□□□□□ -0.62
Trav13d-4A0A0G2JFX3 Col5a3-201ENSMUST00000004201 6119 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Trav13d-4A0A0G2JFX3 Abcb4-201ENSMUST00000003717 4079 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Trav13d-4A0A0G2JFX3 Mapk7-201ENSMUST00000079080 3019 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Trav13d-4A0A0G2JFX3 Med26-201ENSMUST00000058534 2997 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Trav13d-4A0A0G2JFX3 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Trav13d-4A0A0G2JFX3 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC11.21□□□□□ -0.62
Trav13d-4A0A0G2JFX3 BC005537-201ENSMUST00000019276 5849 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.62
Trav13d-4A0A0G2JFX3 CT010478.1-201ENSMUST00000220747 2787 ntBASIC11.21□□□□□ -0.62
Trav13d-4A0A0G2JFX3 Rcc1-203ENSMUST00000105951 2326 ntAPPRIS P1 TSL 5 BASIC11.2□□□□□ -0.62
Trav13d-4A0A0G2JFX3 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav13d-4A0A0G2JFX3 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav13d-4A0A0G2JFX3 Agbl3-204ENSMUST00000115016 3734 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav13d-4A0A0G2JFX3 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav13d-4A0A0G2JFX3 Fam72a-201ENSMUST00000068613 2191 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav13d-4A0A0G2JFX3 Mmp23-201ENSMUST00000030937 1434 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav13d-4A0A0G2JFX3 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav13d-4A0A0G2JFX3 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav13d-4A0A0G2JFX3 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav13d-4A0A0G2JFX3 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC11.2□□□□□ -0.62
Trav13d-4A0A0G2JFX3 Cox16-207ENSMUST00000169124 685 ntTSL 2 BASIC11.2□□□□□ -0.62
Trav13d-4A0A0G2JFX3 AC120002.2-201ENSMUST00000220205 773 ntBASIC11.2□□□□□ -0.62
Trav13d-4A0A0G2JFX3 Id1-201ENSMUST00000038368 934 ntAPPRIS P2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav13d-4A0A0G2JFX3 Rps6kb2-201ENSMUST00000025749 1864 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav13d-4A0A0G2JFX3 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC11.2□□□□□ -0.62
Trav13d-4A0A0G2JFX3 Dnajb2-208ENSMUST00000188346 1823 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav13d-4A0A0G2JFX3 Gnb3-201ENSMUST00000024206 1846 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav13d-4A0A0G2JFX3 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Trav13d-4A0A0G2JFX3 Ak3-201ENSMUST00000025696 2809 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav13d-4A0A0G2JFX3 Nfatc1-204ENSMUST00000170905 4896 ntAPPRIS ALT2 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav13d-4A0A0G2JFX3 Ctsh-201ENSMUST00000034915 1617 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav13d-4A0A0G2JFX3 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC11.2□□□□□ -0.62
Trav13d-4A0A0G2JFX3 Mex3c-201ENSMUST00000091852 3738 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav13d-4A0A0G2JFX3 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav13d-4A0A0G2JFX3 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC11.2□□□□□ -0.62
Trav13d-4A0A0G2JFX3 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav13d-4A0A0G2JFX3 Anapc7-203ENSMUST00000122010 2950 ntAPPRIS P1 TSL 5 BASIC11.19□□□□□ -0.62
Trav13d-4A0A0G2JFX3 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav13d-4A0A0G2JFX3 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav13d-4A0A0G2JFX3 Gpd1l-201ENSMUST00000084853 1436 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Trav13d-4A0A0G2JFX3 Gdf5-201ENSMUST00000040162 2320 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav13d-4A0A0G2JFX3 Cisd2-202ENSMUST00000120988 1363 ntTSL 1 (best) BASIC11.19□□□□□ -0.62
Trav13d-4A0A0G2JFX3 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav13d-4A0A0G2JFX3 L3hypdh-201ENSMUST00000019862 1831 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav13d-4A0A0G2JFX3 Ttc39b-202ENSMUST00000048274 1804 ntAPPRIS ALT2 TSL 1 (best) BASIC11.19□□□□□ -0.62
Trav13d-4A0A0G2JFX3 St6galnac2-201ENSMUST00000079545 3643 ntAPPRIS P1 TSL 1 (best) BASIC11.19□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 26.7 ms