Protein–RNA interactions for Protein: A0A0G2JEU8

Trav13n-1, T cell receptor alpha variable 13N-1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13n-1A0A0G2JEU8 Nipal3-201ENSMUST00000102549 5153 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav13n-1A0A0G2JEU8 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Trav13n-1A0A0G2JEU8 Gdf15-201ENSMUST00000003808 1545 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav13n-1A0A0G2JEU8 Gnb1-202ENSMUST00000105616 3088 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav13n-1A0A0G2JEU8 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trav13n-1A0A0G2JEU8 Ube2j2-201ENSMUST00000024056 3483 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trav13n-1A0A0G2JEU8 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav13n-1A0A0G2JEU8 Aldh7a1-201ENSMUST00000066208 1914 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav13n-1A0A0G2JEU8 Ubxn11-202ENSMUST00000074690 1573 ntAPPRIS P2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav13n-1A0A0G2JEU8 D16Ertd472e-203ENSMUST00000114220 2453 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav13n-1A0A0G2JEU8 Doc2g-201ENSMUST00000025806 1446 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav13n-1A0A0G2JEU8 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trav13n-1A0A0G2JEU8 A130014A01Rik-201ENSMUST00000183021 2323 ntBASIC11.8□□□□□ -0.52
Trav13n-1A0A0G2JEU8 Fam57b-201ENSMUST00000079423 2328 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav13n-1A0A0G2JEU8 Idh1-201ENSMUST00000097709 2302 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav13n-1A0A0G2JEU8 Nsmf-207ENSMUST00000116574 2863 ntTSL 5 BASIC11.8□□□□□ -0.52
Trav13n-1A0A0G2JEU8 Tmsb10-202ENSMUST00000114049 690 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav13n-1A0A0G2JEU8 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC11.8□□□□□ -0.52
Trav13n-1A0A0G2JEU8 4930401G09Rik-201ENSMUST00000139500 637 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trav13n-1A0A0G2JEU8 4933412L11Rik-201ENSMUST00000203702 1044 ntBASIC11.8□□□□□ -0.52
Trav13n-1A0A0G2JEU8 Ube2t-201ENSMUST00000027687 1116 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav13n-1A0A0G2JEU8 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav13n-1A0A0G2JEU8 Cldn4-201ENSMUST00000051401 1816 ntAPPRIS P1 BASIC11.8□□□□□ -0.52
Trav13n-1A0A0G2JEU8 Spon1-202ENSMUST00000084696 5201 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trav13n-1A0A0G2JEU8 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav13n-1A0A0G2JEU8 Magix-201ENSMUST00000115695 1342 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav13n-1A0A0G2JEU8 Mettl21a-201ENSMUST00000053469 2666 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav13n-1A0A0G2JEU8 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
Trav13n-1A0A0G2JEU8 Htr5b-201ENSMUST00000055884 1935 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav13n-1A0A0G2JEU8 Mtif3-201ENSMUST00000016654 2131 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav13n-1A0A0G2JEU8 Map6-207ENSMUST00000208924 2906 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
Trav13n-1A0A0G2JEU8 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav13n-1A0A0G2JEU8 Ccdc166-202ENSMUST00000183130 1563 ntAPPRIS P1 TSL 2 BASIC11.79□□□□□ -0.52
Trav13n-1A0A0G2JEU8 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav13n-1A0A0G2JEU8 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Trav13n-1A0A0G2JEU8 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Trav13n-1A0A0G2JEU8 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC11.79□□□□□ -0.52
Trav13n-1A0A0G2JEU8 Cux2-201ENSMUST00000086317 5113 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav13n-1A0A0G2JEU8 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav13n-1A0A0G2JEU8 Cyb561d2-201ENSMUST00000041459 1786 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav13n-1A0A0G2JEU8 Cdipt-201ENSMUST00000032920 1974 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav13n-1A0A0G2JEU8 Arid3b-202ENSMUST00000098686 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav13n-1A0A0G2JEU8 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Trav13n-1A0A0G2JEU8 Bri3bp-201ENSMUST00000049040 6473 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav13n-1A0A0G2JEU8 Gm10649-203ENSMUST00000148066 1812 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Trav13n-1A0A0G2JEU8 Camsap3-201ENSMUST00000057028 4450 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav13n-1A0A0G2JEU8 Trim54-202ENSMUST00000202769 1408 ntAPPRIS ALT1 TSL 5 BASIC11.79□□□□□ -0.52
Trav13n-1A0A0G2JEU8 Tyk2-205ENSMUST00000214864 1662 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Trav13n-1A0A0G2JEU8 P2rx4-201ENSMUST00000031429 2702 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav13n-1A0A0G2JEU8 Gm26627-201ENSMUST00000181540 1487 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Trav13n-1A0A0G2JEU8 Gm11336-201ENSMUST00000118168 334 ntBASIC11.79□□□□□ -0.52
Trav13n-1A0A0G2JEU8 Taco1os-201ENSMUST00000140736 644 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Trav13n-1A0A0G2JEU8 Aicda-202ENSMUST00000160685 1292 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Trav13n-1A0A0G2JEU8 Pyy-201ENSMUST00000017455 555 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav13n-1A0A0G2JEU8 Flg-207ENSMUST00000180293 768 ntAPPRIS ALT2 BASIC11.79□□□□□ -0.52
Trav13n-1A0A0G2JEU8 Ank2-226ENSMUST00000189368 339 ntBASIC11.79□□□□□ -0.52
Trav13n-1A0A0G2JEU8 Ndufb8-201ENSMUST00000026222 680 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav13n-1A0A0G2JEU8 Etfb-201ENSMUST00000004729 893 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav13n-1A0A0G2JEU8 Alkbh2-201ENSMUST00000053657 1073 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav13n-1A0A0G2JEU8 BC049762-201ENSMUST00000054226 760 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav13n-1A0A0G2JEU8 Erich2-201ENSMUST00000100041 1749 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav13n-1A0A0G2JEU8 Gm26592-201ENSMUST00000180870 1730 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
Trav13n-1A0A0G2JEU8 Mycs-201ENSMUST00000058404 2368 ntAPPRIS P1 BASIC11.79□□□□□ -0.52
Trav13n-1A0A0G2JEU8 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav13n-1A0A0G2JEU8 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav13n-1A0A0G2JEU8 Haus4-201ENSMUST00000022784 1587 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav13n-1A0A0G2JEU8 Cnksr1-201ENSMUST00000030645 2468 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav13n-1A0A0G2JEU8 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav13n-1A0A0G2JEU8 Acvrl1-203ENSMUST00000119063 1818 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
Trav13n-1A0A0G2JEU8 Klf9-201ENSMUST00000036884 3263 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav13n-1A0A0G2JEU8 Dok4-201ENSMUST00000046461 2590 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav13n-1A0A0G2JEU8 Sars2-201ENSMUST00000094632 1868 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav13n-1A0A0G2JEU8 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Trav13n-1A0A0G2JEU8 Rbm12b1-202ENSMUST00000069128 3069 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav13n-1A0A0G2JEU8 Dcps-202ENSMUST00000119847 1445 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Trav13n-1A0A0G2JEU8 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC11.78□□□□□ -0.52
Trav13n-1A0A0G2JEU8 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav13n-1A0A0G2JEU8 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC11.78□□□□□ -0.52
Trav13n-1A0A0G2JEU8 Ern1-204ENSMUST00000106801 1957 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Trav13n-1A0A0G2JEU8 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC11.78□□□□□ -0.52
Trav13n-1A0A0G2JEU8 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav13n-1A0A0G2JEU8 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Trav13n-1A0A0G2JEU8 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC11.78□□□□□ -0.52
Trav13n-1A0A0G2JEU8 Mrps12-204ENSMUST00000171183 883 ntAPPRIS P1 TSL 2 BASIC11.78□□□□□ -0.52
Trav13n-1A0A0G2JEU8 Gm17807-201ENSMUST00000186869 298 ntBASIC11.78□□□□□ -0.52
Trav13n-1A0A0G2JEU8 AC156576.2-201ENSMUST00000222752 503 ntTSL 5 BASIC11.78□□□□□ -0.52
Trav13n-1A0A0G2JEU8 Zic1-202ENSMUST00000065360 2811 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav13n-1A0A0G2JEU8 Cd5-201ENSMUST00000025571 2069 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav13n-1A0A0G2JEU8 Fam171a1-203ENSMUST00000091505 3449 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Trav13n-1A0A0G2JEU8 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav13n-1A0A0G2JEU8 Simc1-201ENSMUST00000118072 2116 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Trav13n-1A0A0G2JEU8 Gcnt4-201ENSMUST00000171324 5087 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav13n-1A0A0G2JEU8 Plcb1-205ENSMUST00000131552 7202 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Trav13n-1A0A0G2JEU8 Tead3-201ENSMUST00000114799 2448 ntAPPRIS P2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav13n-1A0A0G2JEU8 Zbtb45-201ENSMUST00000051390 2171 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trav13n-1A0A0G2JEU8 Ppp2r2d-207ENSMUST00000155672 1938 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Trav13n-1A0A0G2JEU8 Gm6190-201ENSMUST00000220683 1374 ntBASIC11.78□□□□□ -0.52
Trav13n-1A0A0G2JEU8 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Trav13n-1A0A0G2JEU8 Shank1-202ENSMUST00000107935 6649 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Trav13n-1A0A0G2JEU8 Rpf1-201ENSMUST00000029838 1661 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 20.7 ms