Protein–RNA interactions for Protein: A0A0B4J1H3

Trbv16, T cell receptor beta, variable 16 (Fragment), mousemouse

Predictions only

Length 115 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv16A0A0B4J1H3 Cox7a2l-202ENSMUST00000167741 1147 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Trbv16A0A0B4J1H3 Slc25a41-202ENSMUST00000169012 1172 ntAPPRIS ALT2 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trbv16A0A0B4J1H3 Pdxk-ps-203ENSMUST00000183934 680 ntTSL 3 BASIC11.78□□□□□ -0.52
Trbv16A0A0B4J1H3 Ccnd2-204ENSMUST00000201637 1006 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Trbv16A0A0B4J1H3 Gm45894-201ENSMUST00000211940 651 ntTSL 2 BASIC11.78□□□□□ -0.52
Trbv16A0A0B4J1H3 AC153881.1-201ENSMUST00000214448 284 ntBASIC11.78□□□□□ -0.52
Trbv16A0A0B4J1H3 Otx2os1-204ENSMUST00000227221 751 ntBASIC11.78□□□□□ -0.52
Trbv16A0A0B4J1H3 Bmyc-201ENSMUST00000061483 983 ntAPPRIS P1 BASIC11.78□□□□□ -0.52
Trbv16A0A0B4J1H3 Asap2-201ENSMUST00000050990 3345 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Trbv16A0A0B4J1H3 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trbv16A0A0B4J1H3 Taf15-201ENSMUST00000021018 2068 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trbv16A0A0B4J1H3 Golt1a-201ENSMUST00000094557 1865 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trbv16A0A0B4J1H3 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trbv16A0A0B4J1H3 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC11.78□□□□□ -0.52
Trbv16A0A0B4J1H3 Nptn-212ENSMUST00000177292 1390 ntAPPRIS P1 TSL 5 BASIC11.78□□□□□ -0.52
Trbv16A0A0B4J1H3 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC11.78□□□□□ -0.52
Trbv16A0A0B4J1H3 Plpp7-201ENSMUST00000057423 1947 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trbv16A0A0B4J1H3 Naa15-201ENSMUST00000029303 6090 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trbv16A0A0B4J1H3 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trbv16A0A0B4J1H3 Pde8b-201ENSMUST00000022192 2517 ntAPPRIS ALT2 TSL 5 BASIC11.78□□□□□ -0.52
Trbv16A0A0B4J1H3 Phf7-203ENSMUST00000226565 1971 ntBASIC11.78□□□□□ -0.52
Trbv16A0A0B4J1H3 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC11.78□□□□□ -0.52
Trbv16A0A0B4J1H3 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Trbv16A0A0B4J1H3 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Trbv16A0A0B4J1H3 Pias4-201ENSMUST00000005064 2571 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Trbv16A0A0B4J1H3 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Trbv16A0A0B4J1H3 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Trbv16A0A0B4J1H3 Zfp655-206ENSMUST00000200039 1765 ntAPPRIS ALT1 TSL 1 (best) BASIC11.77□□□□□ -0.52
Trbv16A0A0B4J1H3 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.52
Trbv16A0A0B4J1H3 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC11.77□□□□□ -0.52
Trbv16A0A0B4J1H3 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC11.77□□□□□ -0.52
Trbv16A0A0B4J1H3 Tmem117-201ENSMUST00000080141 2781 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trbv16A0A0B4J1H3 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
Trbv16A0A0B4J1H3 Adra2c-201ENSMUST00000049545 3445 ntAPPRIS P1 BASIC11.77□□□□□ -0.53
Trbv16A0A0B4J1H3 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trbv16A0A0B4J1H3 Krt27-201ENSMUST00000017732 1550 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trbv16A0A0B4J1H3 Hmgb3-202ENSMUST00000072699 1571 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trbv16A0A0B4J1H3 Dohh-202ENSMUST00000121047 946 ntTSL 2 BASIC11.77□□□□□ -0.53
Trbv16A0A0B4J1H3 Tex30-204ENSMUST00000128190 1275 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trbv16A0A0B4J1H3 Bvht-202ENSMUST00000183087 588 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Trbv16A0A0B4J1H3 Gm36967-201ENSMUST00000193814 266 ntBASIC11.77□□□□□ -0.53
Trbv16A0A0B4J1H3 Fxyd1-208ENSMUST00000205807 539 ntTSL 3 BASIC11.77□□□□□ -0.53
Trbv16A0A0B4J1H3 6230400D17Rik-202ENSMUST00000224976 1019 ntBASIC11.77□□□□□ -0.53
Trbv16A0A0B4J1H3 Arl2-201ENSMUST00000025893 1144 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trbv16A0A0B4J1H3 Dusp15-201ENSMUST00000037715 715 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Trbv16A0A0B4J1H3 1700020N01Rik-201ENSMUST00000057341 1062 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trbv16A0A0B4J1H3 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trbv16A0A0B4J1H3 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC11.77□□□□□ -0.53
Trbv16A0A0B4J1H3 4930524O07Rik-203ENSMUST00000193135 2289 ntBASIC11.77□□□□□ -0.53
Trbv16A0A0B4J1H3 Ntrk2-205ENSMUST00000224402 2284 ntBASIC11.77□□□□□ -0.53
Trbv16A0A0B4J1H3 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trbv16A0A0B4J1H3 Hmg20b-213ENSMUST00000167481 1321 ntAPPRIS P1 TSL 5 BASIC11.77□□□□□ -0.53
Trbv16A0A0B4J1H3 Fgfr2-215ENSMUST00000122054 3323 ntAPPRIS P4 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trbv16A0A0B4J1H3 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Trbv16A0A0B4J1H3 Zfp800-202ENSMUST00000115320 4311 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trbv16A0A0B4J1H3 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trbv16A0A0B4J1H3 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Trbv16A0A0B4J1H3 Crhbp-201ENSMUST00000045583 1701 ntTSL 1 (best) BASIC11.77□□□□□ -0.53
Trbv16A0A0B4J1H3 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trbv16A0A0B4J1H3 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trbv16A0A0B4J1H3 Gm32996-201ENSMUST00000199828 1447 ntBASIC11.77□□□□□ -0.53
Trbv16A0A0B4J1H3 Dmc1-201ENSMUST00000023065 2192 ntAPPRIS P1 TSL 1 (best) BASIC11.77□□□□□ -0.53
Trbv16A0A0B4J1H3 B3gat2-203ENSMUST00000144602 1488 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Trbv16A0A0B4J1H3 Loxl4-205ENSMUST00000171432 2274 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trbv16A0A0B4J1H3 Gm26752-201ENSMUST00000181086 1537 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Trbv16A0A0B4J1H3 Ggnbp1-201ENSMUST00000053683 1525 ntAPPRIS P3 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trbv16A0A0B4J1H3 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trbv16A0A0B4J1H3 Chchd4-201ENSMUST00000040835 3472 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trbv16A0A0B4J1H3 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trbv16A0A0B4J1H3 Mid1-206ENSMUST00000112107 3194 ntTSL 5 BASIC11.76□□□□□ -0.53
Trbv16A0A0B4J1H3 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trbv16A0A0B4J1H3 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trbv16A0A0B4J1H3 Adam23-201ENSMUST00000087374 6426 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trbv16A0A0B4J1H3 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trbv16A0A0B4J1H3 9930021J03Rik-204ENSMUST00000177155 6632 ntAPPRIS P1 TSL 5 BASIC11.76□□□□□ -0.53
Trbv16A0A0B4J1H3 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC11.76□□□□□ -0.53
Trbv16A0A0B4J1H3 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trbv16A0A0B4J1H3 Tlcd1-203ENSMUST00000108338 714 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Trbv16A0A0B4J1H3 Atp5c1-203ENSMUST00000114897 1166 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trbv16A0A0B4J1H3 Hmga1-206ENSMUST00000119486 1003 ntAPPRIS P3 TSL 2 BASIC11.76□□□□□ -0.53
Trbv16A0A0B4J1H3 Gm11539-201ENSMUST00000119837 557 ntBASIC11.76□□□□□ -0.53
Trbv16A0A0B4J1H3 Dnajb3-201ENSMUST00000119972 1051 ntAPPRIS P1 BASIC11.76□□□□□ -0.53
Trbv16A0A0B4J1H3 Atp23-202ENSMUST00000168520 1043 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trbv16A0A0B4J1H3 Gm44450-201ENSMUST00000199528 114 ntBASIC11.76□□□□□ -0.53
Trbv16A0A0B4J1H3 Zfand6-208ENSMUST00000209117 2955 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trbv16A0A0B4J1H3 Mrpl14-201ENSMUST00000024734 645 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trbv16A0A0B4J1H3 Angptl8-201ENSMUST00000058777 865 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trbv16A0A0B4J1H3 Slc12a5-201ENSMUST00000099092 6028 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trbv16A0A0B4J1H3 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trbv16A0A0B4J1H3 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trbv16A0A0B4J1H3 Gatc-201ENSMUST00000139167 1797 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trbv16A0A0B4J1H3 Mfsd4b3-201ENSMUST00000095749 1787 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trbv16A0A0B4J1H3 Taf6l-206ENSMUST00000176610 2203 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trbv16A0A0B4J1H3 Gm16011-201ENSMUST00000121567 2662 ntBASIC11.76□□□□□ -0.53
Trbv16A0A0B4J1H3 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Trbv16A0A0B4J1H3 4933428P19Rik-201ENSMUST00000199616 1376 ntBASIC11.76□□□□□ -0.53
Trbv16A0A0B4J1H3 Syn1-201ENSMUST00000081893 3209 ntAPPRIS P4 TSL 5 BASIC11.76□□□□□ -0.53
Trbv16A0A0B4J1H3 Mapk8ip3-205ENSMUST00000119115 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trbv16A0A0B4J1H3 Mastl-201ENSMUST00000028119 5590 ntAPPRIS P1 TSL 1 (best) BASIC11.76□□□□□ -0.53
Trbv16A0A0B4J1H3 Ppm1h-206ENSMUST00000161487 2931 ntTSL 1 (best) BASIC11.76□□□□□ -0.53
Retrieved 100 of 76,532 protein–RNA pairs in 22.9 ms