Protein–RNA interactions for Protein: A0A0B4J1H2

Trbv13-3, T cell receptor beta, variable 13-3 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv13-3A0A0B4J1H2 Arf2-202ENSMUST00000063347 2660 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trbv13-3A0A0B4J1H2 Fam178b-202ENSMUST00000170295 2286 ntAPPRIS ALT2 TSL 5 BASIC12.72□□□□□ -0.37
Trbv13-3A0A0B4J1H2 Pptc7-202ENSMUST00000119015 2233 ntAPPRIS ALT2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trbv13-3A0A0B4J1H2 Daxx-201ENSMUST00000079421 2580 ntAPPRIS P2 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trbv13-3A0A0B4J1H2 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trbv13-3A0A0B4J1H2 Apoa4-201ENSMUST00000034585 1815 ntAPPRIS P1 TSL 1 (best) BASIC12.72□□□□□ -0.37
Trbv13-3A0A0B4J1H2 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trbv13-3A0A0B4J1H2 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trbv13-3A0A0B4J1H2 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trbv13-3A0A0B4J1H2 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trbv13-3A0A0B4J1H2 Phf7-203ENSMUST00000226565 1971 ntBASIC12.71□□□□□ -0.37
Trbv13-3A0A0B4J1H2 Smox-203ENSMUST00000110180 1617 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Trbv13-3A0A0B4J1H2 Nudt16-201ENSMUST00000035179 1631 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trbv13-3A0A0B4J1H2 Zkscan3-201ENSMUST00000070785 2561 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trbv13-3A0A0B4J1H2 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trbv13-3A0A0B4J1H2 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trbv13-3A0A0B4J1H2 Dmrta2os-202ENSMUST00000141893 691 ntTSL 3 BASIC12.71□□□□□ -0.37
Trbv13-3A0A0B4J1H2 1700125G02Rik-201ENSMUST00000154947 519 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Trbv13-3A0A0B4J1H2 1700081N11Rik-202ENSMUST00000221447 569 ntTSL 3 BASIC12.71□□□□□ -0.37
Trbv13-3A0A0B4J1H2 Hist3h2ba-201ENSMUST00000078267 614 ntAPPRIS P1 BASIC12.71□□□□□ -0.37
Trbv13-3A0A0B4J1H2 Lhx3-201ENSMUST00000028302 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trbv13-3A0A0B4J1H2 Gm13425-201ENSMUST00000145389 5391 ntTSL 3 BASIC12.71□□□□□ -0.37
Trbv13-3A0A0B4J1H2 Phldb1-211ENSMUST00000135436 2844 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Trbv13-3A0A0B4J1H2 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trbv13-3A0A0B4J1H2 Cpne6-203ENSMUST00000165262 2178 ntAPPRIS ALT1 TSL 1 (best) BASIC12.71□□□□□ -0.37
Trbv13-3A0A0B4J1H2 Tmem143-203ENSMUST00000209350 2466 ntTSL 1 (best) BASIC12.71□□□□□ -0.37
Trbv13-3A0A0B4J1H2 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trbv13-3A0A0B4J1H2 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trbv13-3A0A0B4J1H2 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC12.71□□□□□ -0.38
Trbv13-3A0A0B4J1H2 Mllt1-201ENSMUST00000025053 3608 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trbv13-3A0A0B4J1H2 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC12.71□□□□□ -0.38
Trbv13-3A0A0B4J1H2 Gm45560-201ENSMUST00000211492 1472 ntBASIC12.71□□□□□ -0.38
Trbv13-3A0A0B4J1H2 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC12.71□□□□□ -0.38
Trbv13-3A0A0B4J1H2 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC12.71□□□□□ -0.38
Trbv13-3A0A0B4J1H2 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC12.71□□□□□ -0.38
Trbv13-3A0A0B4J1H2 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC12.71□□□□□ -0.38
Trbv13-3A0A0B4J1H2 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trbv13-3A0A0B4J1H2 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trbv13-3A0A0B4J1H2 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trbv13-3A0A0B4J1H2 Lats1-202ENSMUST00000165952 7209 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trbv13-3A0A0B4J1H2 Eda-206ENSMUST00000113779 4955 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trbv13-3A0A0B4J1H2 Csrp2-201ENSMUST00000020403 1384 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trbv13-3A0A0B4J1H2 B230217O12Rik-201ENSMUST00000181921 1642 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trbv13-3A0A0B4J1H2 Prrg2-208ENSMUST00000210690 1623 ntAPPRIS P2 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trbv13-3A0A0B4J1H2 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trbv13-3A0A0B4J1H2 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trbv13-3A0A0B4J1H2 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Trbv13-3A0A0B4J1H2 Chpf-202ENSMUST00000094818 3065 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trbv13-3A0A0B4J1H2 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trbv13-3A0A0B4J1H2 Gm53-201ENSMUST00000129907 1172 ntTSL 2 BASIC12.7□□□□□ -0.38
Trbv13-3A0A0B4J1H2 Smim10l1-204ENSMUST00000191462 574 ntTSL 3 BASIC12.7□□□□□ -0.38
Trbv13-3A0A0B4J1H2 1700003N22Rik-201ENSMUST00000194834 808 ntBASIC12.7□□□□□ -0.38
Trbv13-3A0A0B4J1H2 Gm44732-201ENSMUST00000208055 635 ntTSL 3 BASIC12.7□□□□□ -0.38
Trbv13-3A0A0B4J1H2 Smn1-201ENSMUST00000022147 1222 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trbv13-3A0A0B4J1H2 Gm6365-201ENSMUST00000054711 744 ntBASIC12.7□□□□□ -0.38
Trbv13-3A0A0B4J1H2 Mir22hg-202ENSMUST00000149940 1752 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trbv13-3A0A0B4J1H2 Arhgap11a-204ENSMUST00000110949 4458 ntAPPRIS P2 TSL 5 BASIC12.7□□□□□ -0.38
Trbv13-3A0A0B4J1H2 Zfp281-202ENSMUST00000112046 4937 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trbv13-3A0A0B4J1H2 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC12.7□□□□□ -0.38
Trbv13-3A0A0B4J1H2 Adgrb2-205ENSMUST00000106017 5104 ntAPPRIS P3 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trbv13-3A0A0B4J1H2 Gm26761-201ENSMUST00000180650 2192 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trbv13-3A0A0B4J1H2 Ppp1r2-201ENSMUST00000060188 4078 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trbv13-3A0A0B4J1H2 Acot5-202ENSMUST00000072505 1401 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trbv13-3A0A0B4J1H2 Ugcg-201ENSMUST00000030074 4012 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trbv13-3A0A0B4J1H2 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC12.7□□□□□ -0.38
Trbv13-3A0A0B4J1H2 Fnbp1-204ENSMUST00000100208 1859 ntTSL 5 BASIC12.7□□□□□ -0.38
Trbv13-3A0A0B4J1H2 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC12.7□□□□□ -0.38
Trbv13-3A0A0B4J1H2 Sybu-201ENSMUST00000090057 3230 ntAPPRIS P4 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trbv13-3A0A0B4J1H2 Ttc14-202ENSMUST00000108210 2684 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Trbv13-3A0A0B4J1H2 Mettl4-ps1-202ENSMUST00000130218 1323 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trbv13-3A0A0B4J1H2 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trbv13-3A0A0B4J1H2 Gm5934-201ENSMUST00000120734 2588 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
Trbv13-3A0A0B4J1H2 Gm6211-202ENSMUST00000167849 925 ntBASIC12.69□□□□□ -0.38
Trbv13-3A0A0B4J1H2 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC12.69□□□□□ -0.38
Trbv13-3A0A0B4J1H2 Gm26881-201ENSMUST00000180426 593 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trbv13-3A0A0B4J1H2 Ccdc84-211ENSMUST00000217270 681 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trbv13-3A0A0B4J1H2 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trbv13-3A0A0B4J1H2 Tcap-201ENSMUST00000008021 948 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trbv13-3A0A0B4J1H2 Gm10493-201ENSMUST00000097270 612 ntBASIC12.69□□□□□ -0.38
Trbv13-3A0A0B4J1H2 Pdzd4-201ENSMUST00000002080 3970 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trbv13-3A0A0B4J1H2 Tbp-201ENSMUST00000014911 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trbv13-3A0A0B4J1H2 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
Trbv13-3A0A0B4J1H2 Tfap2a-203ENSMUST00000223869 2037 ntBASIC12.69□□□□□ -0.38
Trbv13-3A0A0B4J1H2 Zfp451-201ENSMUST00000019861 3958 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trbv13-3A0A0B4J1H2 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
Trbv13-3A0A0B4J1H2 Camta1-202ENSMUST00000097774 8533 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
Trbv13-3A0A0B4J1H2 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
Trbv13-3A0A0B4J1H2 Gnb1-203ENSMUST00000165335 3143 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trbv13-3A0A0B4J1H2 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC12.68□□□□□ -0.38
Trbv13-3A0A0B4J1H2 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trbv13-3A0A0B4J1H2 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC12.68□□□□□ -0.38
Trbv13-3A0A0B4J1H2 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC12.68□□□□□ -0.38
Trbv13-3A0A0B4J1H2 Ppt2-204ENSMUST00000168391 1342 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Trbv13-3A0A0B4J1H2 Mus81-202ENSMUST00000124334 2067 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trbv13-3A0A0B4J1H2 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trbv13-3A0A0B4J1H2 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trbv13-3A0A0B4J1H2 Slc46a3-201ENSMUST00000031655 2434 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trbv13-3A0A0B4J1H2 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
Trbv13-3A0A0B4J1H2 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trbv13-3A0A0B4J1H2 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 24.4 ms