Protein–RNA interactions for Protein: A0A0B4J1G7

Trbv1, T cell receptor beta, variable 1 (Fragment), mousemouse

Predictions only

Length 116 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trbv1A0A0B4J1G7 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trbv1A0A0B4J1G7 Klf13-202ENSMUST00000183817 599 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trbv1A0A0B4J1G7 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trbv1A0A0B4J1G7 Arfip2-202ENSMUST00000084782 2254 ntAPPRIS P2 TSL 5 BASIC12.79□□□□□ -0.36
Trbv1A0A0B4J1G7 Fip1l1-203ENSMUST00000113535 1969 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trbv1A0A0B4J1G7 Parp6-201ENSMUST00000026267 2709 ntAPPRIS P1 TSL 5 BASIC12.79□□□□□ -0.36
Trbv1A0A0B4J1G7 Gm17501-201ENSMUST00000181247 1700 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trbv1A0A0B4J1G7 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trbv1A0A0B4J1G7 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Trbv1A0A0B4J1G7 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trbv1A0A0B4J1G7 Ubp1-202ENSMUST00000084885 3850 ntAPPRIS P4 TSL 5 BASIC12.79□□□□□ -0.36
Trbv1A0A0B4J1G7 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trbv1A0A0B4J1G7 Capg-202ENSMUST00000114071 1400 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trbv1A0A0B4J1G7 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Trbv1A0A0B4J1G7 Fam181a-201ENSMUST00000179363 1406 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
Trbv1A0A0B4J1G7 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC12.79□□□□□ -0.36
Trbv1A0A0B4J1G7 Sec14l1-203ENSMUST00000103026 2589 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Trbv1A0A0B4J1G7 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trbv1A0A0B4J1G7 Hectd3-201ENSMUST00000050067 4583 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trbv1A0A0B4J1G7 Dtx3-204ENSMUST00000130855 1925 ntAPPRIS ALT1 TSL 5 BASIC12.78□□□□□ -0.36
Trbv1A0A0B4J1G7 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trbv1A0A0B4J1G7 Tmem50b-201ENSMUST00000023686 2347 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trbv1A0A0B4J1G7 Scube3-201ENSMUST00000043503 6699 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trbv1A0A0B4J1G7 Hip1r-201ENSMUST00000000939 6735 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trbv1A0A0B4J1G7 Rfc5-201ENSMUST00000086461 2796 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trbv1A0A0B4J1G7 Usp53-201ENSMUST00000090379 6185 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trbv1A0A0B4J1G7 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Trbv1A0A0B4J1G7 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trbv1A0A0B4J1G7 Bex3-202ENSMUST00000113112 826 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trbv1A0A0B4J1G7 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trbv1A0A0B4J1G7 Dohh-206ENSMUST00000131968 672 ntAPPRIS P1 TSL 3 BASIC12.78□□□□□ -0.36
Trbv1A0A0B4J1G7 Gm10698-201ENSMUST00000182663 604 ntBASIC12.78□□□□□ -0.36
Trbv1A0A0B4J1G7 Spcs1-201ENSMUST00000186131 1005 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trbv1A0A0B4J1G7 Gm4974-201ENSMUST00000209974 875 ntBASIC12.78□□□□□ -0.36
Trbv1A0A0B4J1G7 AC107711.5-202ENSMUST00000226429 702 ntBASIC12.78□□□□□ -0.36
Trbv1A0A0B4J1G7 A230083G16Rik-201ENSMUST00000069553 991 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trbv1A0A0B4J1G7 Gm4756-201ENSMUST00000207585 1716 ntTSL 5 BASIC12.78□□□□□ -0.36
Trbv1A0A0B4J1G7 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trbv1A0A0B4J1G7 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trbv1A0A0B4J1G7 Mpig6b-201ENSMUST00000097337 2252 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trbv1A0A0B4J1G7 A930024E05Rik-201ENSMUST00000148466 1896 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trbv1A0A0B4J1G7 Hrh3-202ENSMUST00000163215 1401 ntTSL 5 BASIC12.78□□□□□ -0.36
Trbv1A0A0B4J1G7 Gpam-201ENSMUST00000061856 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trbv1A0A0B4J1G7 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trbv1A0A0B4J1G7 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Trbv1A0A0B4J1G7 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Trbv1A0A0B4J1G7 Fgf13-201ENSMUST00000033473 2499 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trbv1A0A0B4J1G7 Myef2-201ENSMUST00000067780 2999 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Trbv1A0A0B4J1G7 Notch3-201ENSMUST00000087723 8044 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Trbv1A0A0B4J1G7 Cadm3-202ENSMUST00000111220 5155 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trbv1A0A0B4J1G7 Cdk16-201ENSMUST00000033380 3120 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trbv1A0A0B4J1G7 Eva1c-202ENSMUST00000099543 1554 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Trbv1A0A0B4J1G7 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC12.77□□□□□ -0.36
Trbv1A0A0B4J1G7 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trbv1A0A0B4J1G7 Ifrd1-201ENSMUST00000001672 3378 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trbv1A0A0B4J1G7 Gprc5c-203ENSMUST00000122967 1709 ntTSL 5 BASIC12.77□□□□□ -0.36
Trbv1A0A0B4J1G7 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trbv1A0A0B4J1G7 Hsf4-201ENSMUST00000036127 1739 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trbv1A0A0B4J1G7 Dcdc2a-201ENSMUST00000036932 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trbv1A0A0B4J1G7 Gpr6-201ENSMUST00000061796 1786 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.36
Trbv1A0A0B4J1G7 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC12.77□□□□□ -0.36
Trbv1A0A0B4J1G7 Pick1-202ENSMUST00000053926 2415 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Trbv1A0A0B4J1G7 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Trbv1A0A0B4J1G7 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trbv1A0A0B4J1G7 Psmd4-202ENSMUST00000107237 1332 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trbv1A0A0B4J1G7 Slc35c1-202ENSMUST00000125276 2668 ntTSL 1 (best) BASIC12.77□□□□□ -0.37
Trbv1A0A0B4J1G7 Wipf1-202ENSMUST00000102679 2039 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trbv1A0A0B4J1G7 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trbv1A0A0B4J1G7 Kif26a-201ENSMUST00000128402 6918 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trbv1A0A0B4J1G7 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trbv1A0A0B4J1G7 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trbv1A0A0B4J1G7 Rfx5-207ENSMUST00000137088 4333 ntAPPRIS P1 TSL 5 BASIC12.77□□□□□ -0.37
Trbv1A0A0B4J1G7 Aig1-205ENSMUST00000162610 1554 ntAPPRIS P1 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trbv1A0A0B4J1G7 C130026I21Rik-201ENSMUST00000064341 1561 ntAPPRIS P3 TSL 1 (best) BASIC12.77□□□□□ -0.37
Trbv1A0A0B4J1G7 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trbv1A0A0B4J1G7 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trbv1A0A0B4J1G7 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trbv1A0A0B4J1G7 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trbv1A0A0B4J1G7 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Trbv1A0A0B4J1G7 Trappc10-201ENSMUST00000000384 5047 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trbv1A0A0B4J1G7 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC12.76□□□□□ -0.37
Trbv1A0A0B4J1G7 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trbv1A0A0B4J1G7 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC12.76□□□□□ -0.37
Trbv1A0A0B4J1G7 Noc4l-201ENSMUST00000042147 2075 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trbv1A0A0B4J1G7 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC12.76□□□□□ -0.37
Trbv1A0A0B4J1G7 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC12.76□□□□□ -0.37
Trbv1A0A0B4J1G7 Cdon-202ENSMUST00000119129 7503 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Trbv1A0A0B4J1G7 Fem1b-201ENSMUST00000034775 6785 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trbv1A0A0B4J1G7 Klc1-203ENSMUST00000120544 2261 ntAPPRIS ALT1 TSL 5 BASIC12.76□□□□□ -0.37
Trbv1A0A0B4J1G7 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trbv1A0A0B4J1G7 Ephb1-203ENSMUST00000149800 3471 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trbv1A0A0B4J1G7 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC12.76□□□□□ -0.37
Trbv1A0A0B4J1G7 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trbv1A0A0B4J1G7 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trbv1A0A0B4J1G7 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC12.76□□□□□ -0.37
Trbv1A0A0B4J1G7 Ndufb2-202ENSMUST00000119379 455 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trbv1A0A0B4J1G7 Gm22240-201ENSMUST00000175225 82 ntBASIC12.76□□□□□ -0.37
Trbv1A0A0B4J1G7 Uqcr11-201ENSMUST00000020372 445 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Trbv1A0A0B4J1G7 Map7-205ENSMUST00000214231 675 ntTSL 3 BASIC12.76□□□□□ -0.37
Trbv1A0A0B4J1G7 Tmem14c-201ENSMUST00000021790 914 ntAPPRIS P1 TSL 1 (best) BASIC12.76□□□□□ -0.37
Retrieved 100 of 76,532 protein–RNA pairs in 32.9 ms