Protein–RNA interactions for Protein: A0A075B6C2

Trav13-4-dv7, T cell receptor alpha variable 13-4-DV7 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13-4-dv7A0A075B6C2 Arap3-201ENSMUST00000042944 5224 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav13-4-dv7A0A075B6C2 Perp-201ENSMUST00000019998 1952 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav13-4-dv7A0A075B6C2 Slc35a1-201ENSMUST00000029970 2039 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav13-4-dv7A0A075B6C2 Fam221a-201ENSMUST00000060561 2730 ntAPPRIS P3 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav13-4-dv7A0A075B6C2 Gm8909-201ENSMUST00000040467 1357 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav13-4-dv7A0A075B6C2 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC11.24□□□□□ -0.61
Trav13-4-dv7A0A075B6C2 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav13-4-dv7A0A075B6C2 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav13-4-dv7A0A075B6C2 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav13-4-dv7A0A075B6C2 Nmt2-203ENSMUST00000102989 2162 ntAPPRIS P1 TSL 5 BASIC11.24□□□□□ -0.61
Trav13-4-dv7A0A075B6C2 Sgms1-201ENSMUST00000099514 3665 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav13-4-dv7A0A075B6C2 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav13-4-dv7A0A075B6C2 Hs3st2-201ENSMUST00000084628 2278 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav13-4-dv7A0A075B6C2 Siglecf-202ENSMUST00000121494 1572 ntAPPRIS ALT2 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav13-4-dv7A0A075B6C2 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav13-4-dv7A0A075B6C2 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav13-4-dv7A0A075B6C2 Arpp19-201ENSMUST00000007800 4046 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav13-4-dv7A0A075B6C2 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC11.24□□□□□ -0.61
Trav13-4-dv7A0A075B6C2 Raxos1-201ENSMUST00000181100 2547 ntTSL 1 (best) BASIC11.24□□□□□ -0.61
Trav13-4-dv7A0A075B6C2 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Trav13-4-dv7A0A075B6C2 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav13-4-dv7A0A075B6C2 Macrod2-201ENSMUST00000043836 3552 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Trav13-4-dv7A0A075B6C2 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav13-4-dv7A0A075B6C2 Htatsf1-201ENSMUST00000088652 2810 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav13-4-dv7A0A075B6C2 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav13-4-dv7A0A075B6C2 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav13-4-dv7A0A075B6C2 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav13-4-dv7A0A075B6C2 Trip6-201ENSMUST00000024119 2168 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav13-4-dv7A0A075B6C2 Gba2-201ENSMUST00000030189 3544 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav13-4-dv7A0A075B6C2 Myo9b-203ENSMUST00000170242 7297 ntAPPRIS ALT2 TSL 5 BASIC11.23□□□□□ -0.61
Trav13-4-dv7A0A075B6C2 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav13-4-dv7A0A075B6C2 Spata3-208ENSMUST00000149469 1110 ntTSL 5 BASIC11.23□□□□□ -0.61
Trav13-4-dv7A0A075B6C2 Gm16105-201ENSMUST00000156926 697 ntTSL 3 BASIC11.23□□□□□ -0.61
Trav13-4-dv7A0A075B6C2 Igflr1-202ENSMUST00000172251 1224 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav13-4-dv7A0A075B6C2 Gm26829-201ENSMUST00000180581 934 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Trav13-4-dv7A0A075B6C2 Ntpcr-201ENSMUST00000034313 1155 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav13-4-dv7A0A075B6C2 Ube2s-201ENSMUST00000079496 1238 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav13-4-dv7A0A075B6C2 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC11.23□□□□□ -0.61
Trav13-4-dv7A0A075B6C2 Slc29a4-201ENSMUST00000058418 2789 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav13-4-dv7A0A075B6C2 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav13-4-dv7A0A075B6C2 Ntng1-204ENSMUST00000106571 1446 ntTSL 5 BASIC11.23□□□□□ -0.61
Trav13-4-dv7A0A075B6C2 Rbbp7-202ENSMUST00000112326 1430 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Trav13-4-dv7A0A075B6C2 Ntng1-210ENSMUST00000138953 1443 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Trav13-4-dv7A0A075B6C2 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC11.23□□□□□ -0.61
Trav13-4-dv7A0A075B6C2 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Trav13-4-dv7A0A075B6C2 Dnal4-201ENSMUST00000023055 1469 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav13-4-dv7A0A075B6C2 Foxp2-207ENSMUST00000115477 6760 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav13-4-dv7A0A075B6C2 Mdfi-202ENSMUST00000066368 1711 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav13-4-dv7A0A075B6C2 Lrrfip2-207ENSMUST00000197256 1819 ntTSL 5 BASIC11.23□□□□□ -0.61
Trav13-4-dv7A0A075B6C2 Mesp2-201ENSMUST00000107394 1944 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav13-4-dv7A0A075B6C2 Ppp2r2a-204ENSMUST00000225380 1988 ntBASIC11.23□□□□□ -0.61
Trav13-4-dv7A0A075B6C2 Pdzrn3-201ENSMUST00000075994 4104 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav13-4-dv7A0A075B6C2 Atoh1-201ENSMUST00000101351 2121 ntAPPRIS P1 BASIC11.23□□□□□ -0.61
Trav13-4-dv7A0A075B6C2 Dnajb11-204ENSMUST00000166487 2534 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Trav13-4-dv7A0A075B6C2 Col13a1-203ENSMUST00000105452 3037 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Trav13-4-dv7A0A075B6C2 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav13-4-dv7A0A075B6C2 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC11.22□□□□□ -0.61
Trav13-4-dv7A0A075B6C2 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Trav13-4-dv7A0A075B6C2 Tbc1d30-201ENSMUST00000064107 5695 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav13-4-dv7A0A075B6C2 Tcf3-207ENSMUST00000105343 2920 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav13-4-dv7A0A075B6C2 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Trav13-4-dv7A0A075B6C2 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC11.22□□□□□ -0.61
Trav13-4-dv7A0A075B6C2 Gm6277-201ENSMUST00000180860 1839 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Trav13-4-dv7A0A075B6C2 Gm37437-201ENSMUST00000194451 1937 ntBASIC11.22□□□□□ -0.61
Trav13-4-dv7A0A075B6C2 Trmt13-210ENSMUST00000198454 880 ntBASIC11.22□□□□□ -0.61
Trav13-4-dv7A0A075B6C2 Aig1-201ENSMUST00000019942 1439 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Trav13-4-dv7A0A075B6C2 Gm42738-201ENSMUST00000201813 439 ntTSL 3 BASIC11.22□□□□□ -0.61
Trav13-4-dv7A0A075B6C2 0610012G03Rik-201ENSMUST00000202722 1445 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
Trav13-4-dv7A0A075B6C2 Gm9731-201ENSMUST00000209480 747 ntBASIC11.22□□□□□ -0.61
Trav13-4-dv7A0A075B6C2 Fdxr-201ENSMUST00000021078 1948 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav13-4-dv7A0A075B6C2 Gm26571-205ENSMUST00000223215 591 ntTSL 3 BASIC11.22□□□□□ -0.61
Trav13-4-dv7A0A075B6C2 Tfap2a-206ENSMUST00000224665 1958 ntAPPRIS ALT1 BASIC11.22□□□□□ -0.61
Trav13-4-dv7A0A075B6C2 Wnt10b-204ENSMUST00000226655 1807 ntBASIC11.22□□□□□ -0.61
Trav13-4-dv7A0A075B6C2 4930426L09Rik-201ENSMUST00000028069 1459 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
Trav13-4-dv7A0A075B6C2 Casp2-201ENSMUST00000031895 3529 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav13-4-dv7A0A075B6C2 Gm6583-201ENSMUST00000051117 2233 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
Trav13-4-dv7A0A075B6C2 Insig1-201ENSMUST00000059155 2697 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav13-4-dv7A0A075B6C2 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav13-4-dv7A0A075B6C2 Prrx1-202ENSMUST00000075805 4986 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Trav13-4-dv7A0A075B6C2 Tmem26-201ENSMUST00000080995 5048 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav13-4-dv7A0A075B6C2 Irak2-203ENSMUST00000089023 1734 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Trav13-4-dv7A0A075B6C2 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC11.22□□□□□ -0.61
Trav13-4-dv7A0A075B6C2 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav13-4-dv7A0A075B6C2 Lgr6-202ENSMUST00000137968 2820 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Trav13-4-dv7A0A075B6C2 Prpf3-207ENSMUST00000161476 2732 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Trav13-4-dv7A0A075B6C2 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Trav13-4-dv7A0A075B6C2 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trav13-4-dv7A0A075B6C2 Pex12-205ENSMUST00000175741 2337 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trav13-4-dv7A0A075B6C2 Gm26889-201ENSMUST00000181523 2252 ntTSL 5 BASIC11.21□□□□□ -0.61
Trav13-4-dv7A0A075B6C2 Tuba8-201ENSMUST00000032233 2263 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trav13-4-dv7A0A075B6C2 AC133083.1-201ENSMUST00000221736 2209 ntBASIC11.21□□□□□ -0.61
Trav13-4-dv7A0A075B6C2 Taok3-202ENSMUST00000111975 2172 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Trav13-4-dv7A0A075B6C2 Coq8b-201ENSMUST00000003860 2181 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trav13-4-dv7A0A075B6C2 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trav13-4-dv7A0A075B6C2 Nr3c2-204ENSMUST00000109913 5916 ntAPPRIS P2 TSL 5 BASIC11.21□□□□□ -0.61
Trav13-4-dv7A0A075B6C2 Bcap29-201ENSMUST00000020979 1949 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trav13-4-dv7A0A075B6C2 Sesn1-202ENSMUST00000099931 3809 ntAPPRIS ALT1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trav13-4-dv7A0A075B6C2 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
Trav13-4-dv7A0A075B6C2 AC115863.1-201ENSMUST00000214815 1813 ntBASIC11.21□□□□□ -0.61
Trav13-4-dv7A0A075B6C2 Cend1-202ENSMUST00000124444 1733 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Retrieved 100 of 76,532 protein–RNA pairs in 20.4 ms