Protein–RNA interactions for Protein: A0A075B653

Trav16, T cell receptor alpha variable 16 (Fragment), mousemouse

Predictions only

Length 116 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav16A0A075B653 Mrps10-201ENSMUST00000060752 1109 ntTSL 5 BASIC12.62□□□□□ -0.39
Trav16A0A075B653 BC107364-201ENSMUST00000093126 1159 ntAPPRIS P4 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav16A0A075B653 Ubxn1-201ENSMUST00000096255 1041 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav16A0A075B653 BC107364-202ENSMUST00000098841 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav16A0A075B653 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav16A0A075B653 Pcdha7-201ENSMUST00000192631 5337 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav16A0A075B653 Krt6b-201ENSMUST00000023786 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav16A0A075B653 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav16A0A075B653 Sppl2b-201ENSMUST00000035597 2869 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav16A0A075B653 Gm19684-201ENSMUST00000173128 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav16A0A075B653 Ehd4-201ENSMUST00000028755 3730 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav16A0A075B653 Mmp28-204ENSMUST00000119346 1517 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trav16A0A075B653 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trav16A0A075B653 Rft1-201ENSMUST00000064230 2387 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav16A0A075B653 Htatip2-202ENSMUST00000207895 1338 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav16A0A075B653 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav16A0A075B653 Desi2-201ENSMUST00000027783 8802 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav16A0A075B653 Nfe2-208ENSMUST00000149111 1878 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav16A0A075B653 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC12.61□□□□□ -0.39
Trav16A0A075B653 Sirt6-201ENSMUST00000042923 1891 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav16A0A075B653 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trav16A0A075B653 Tnfrsf25-201ENSMUST00000025706 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav16A0A075B653 2010007H06Rik-202ENSMUST00000186025 4934 ntTSL 2 BASIC12.61□□□□□ -0.39
Trav16A0A075B653 Tor1aip2-205ENSMUST00000111757 6118 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav16A0A075B653 Mfge8-201ENSMUST00000032825 2125 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav16A0A075B653 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trav16A0A075B653 Nup98-205ENSMUST00000211022 3132 ntTSL 2 BASIC12.61□□□□□ -0.39
Trav16A0A075B653 Cpeb3-212ENSMUST00000154376 5671 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav16A0A075B653 Pex1-202ENSMUST00000121291 4555 ntAPPRIS ALT2 TSL 5 BASIC12.61□□□□□ -0.39
Trav16A0A075B653 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trav16A0A075B653 Gm15723-201ENSMUST00000139331 600 ntTSL 3 BASIC12.61□□□□□ -0.39
Trav16A0A075B653 1700067K01Rik-203ENSMUST00000172548 986 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav16A0A075B653 E030044B06Rik-201ENSMUST00000181195 1266 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trav16A0A075B653 Gm10517-202ENSMUST00000192970 758 ntBASIC12.61□□□□□ -0.39
Trav16A0A075B653 Gm18025-201ENSMUST00000221733 862 ntBASIC12.61□□□□□ -0.39
Trav16A0A075B653 Tmem192-201ENSMUST00000026595 1122 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav16A0A075B653 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC12.61□□□□□ -0.39
Trav16A0A075B653 Mrpl49-201ENSMUST00000007482 1722 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav16A0A075B653 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav16A0A075B653 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav16A0A075B653 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav16A0A075B653 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav16A0A075B653 Carmn-201ENSMUST00000181155 1778 ntTSL 2 BASIC12.61□□□□□ -0.39
Trav16A0A075B653 Gk5-201ENSMUST00000085217 2815 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav16A0A075B653 Rcn2-201ENSMUST00000114276 2024 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav16A0A075B653 Slc1a6-201ENSMUST00000005490 2029 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav16A0A075B653 Syt3-201ENSMUST00000118831 2627 ntAPPRIS P1 TSL 5 BASIC12.6□□□□□ -0.39
Trav16A0A075B653 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav16A0A075B653 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav16A0A075B653 Rprm-201ENSMUST00000100089 1460 ntAPPRIS P1 BASIC12.6□□□□□ -0.39
Trav16A0A075B653 A830018L16Rik-201ENSMUST00000048613 2779 ntAPPRIS P3 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav16A0A075B653 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav16A0A075B653 Akp-ps1-202ENSMUST00000212812 1959 ntTSL 5 BASIC12.6□□□□□ -0.39
Trav16A0A075B653 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav16A0A075B653 Gm12382-201ENSMUST00000122005 922 ntBASIC12.6□□□□□ -0.39
Trav16A0A075B653 Gm13158-201ENSMUST00000122007 736 ntBASIC12.6□□□□□ -0.39
Trav16A0A075B653 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC12.6□□□□□ -0.39
Trav16A0A075B653 Gm17661-201ENSMUST00000170317 270 ntBASIC12.6□□□□□ -0.39
Trav16A0A075B653 Gm42545-201ENSMUST00000202755 922 ntBASIC12.6□□□□□ -0.39
Trav16A0A075B653 Bend6-204ENSMUST00000129464 1750 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trav16A0A075B653 Krt13-201ENSMUST00000007275 1654 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav16A0A075B653 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav16A0A075B653 Csnk1e-201ENSMUST00000117786 2694 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav16A0A075B653 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trav16A0A075B653 Tada3-201ENSMUST00000032410 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav16A0A075B653 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav16A0A075B653 Tmx4-201ENSMUST00000038228 5488 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav16A0A075B653 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Trav16A0A075B653 Ttll3-202ENSMUST00000038889 3114 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Trav16A0A075B653 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC12.59□□□□□ -0.39
Trav16A0A075B653 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav16A0A075B653 Kdm7a-201ENSMUST00000002305 9566 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav16A0A075B653 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav16A0A075B653 Arhgef10l-201ENSMUST00000039204 4493 ntAPPRIS P4 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav16A0A075B653 Hsf4-202ENSMUST00000163734 1630 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trav16A0A075B653 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav16A0A075B653 Dhrs7-201ENSMUST00000021512 1385 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav16A0A075B653 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav16A0A075B653 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav16A0A075B653 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC12.59□□□□□ -0.39
Trav16A0A075B653 Atp8a1-204ENSMUST00000113652 854 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trav16A0A075B653 Nudt8-203ENSMUST00000122924 1082 ntTSL 2 BASIC12.59□□□□□ -0.39
Trav16A0A075B653 Tmbim6-202ENSMUST00000159209 944 ntAPPRIS P1 TSL 5 BASIC12.59□□□□□ -0.39
Trav16A0A075B653 Tmem234-215ENSMUST00000173758 453 ntTSL 2 BASIC12.59□□□□□ -0.39
Trav16A0A075B653 Gm9694-201ENSMUST00000193347 1189 ntBASIC12.59□□□□□ -0.39
Trav16A0A075B653 Gm37025-201ENSMUST00000195159 829 ntBASIC12.59□□□□□ -0.39
Trav16A0A075B653 Gm36736-201ENSMUST00000206060 646 ntTSL 3 BASIC12.59□□□□□ -0.39
Trav16A0A075B653 Cldn3-201ENSMUST00000094245 1259 ntAPPRIS P1 BASIC12.59□□□□□ -0.39
Trav16A0A075B653 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav16A0A075B653 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav16A0A075B653 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Trav16A0A075B653 Gps1-202ENSMUST00000116305 1827 ntAPPRIS P2 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav16A0A075B653 Mrps23-203ENSMUST00000118784 1404 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Trav16A0A075B653 Tlcd1-204ENSMUST00000127587 1412 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav16A0A075B653 Aqp2-201ENSMUST00000023752 1416 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav16A0A075B653 Fut7-203ENSMUST00000114278 1990 ntAPPRIS P3 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav16A0A075B653 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC12.59□□□□□ -0.39
Trav16A0A075B653 Fut7-201ENSMUST00000041654 1970 ntAPPRIS P3 TSL 5 BASIC12.59□□□□□ -0.39
Trav16A0A075B653 Tuba1c-201ENSMUST00000058914 1977 ntAPPRIS P1 TSL 1 (best) BASIC12.59□□□□□ -0.39
Trav16A0A075B653 Celf3-208ENSMUST00000198316 2505 ntTSL 1 (best) BASIC12.59□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 40.1 ms