Protein–RNA interactions for Protein: A0A075B651

Trav4-4-dv10, T cell receptor alpha variable 4-4-DV10 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav4-4-dv10A0A075B651 Tax1bp3-201ENSMUST00000040687 1523 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav4-4-dv10A0A075B651 Eif1-201ENSMUST00000049385 1322 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav4-4-dv10A0A075B651 Zfp385b-202ENSMUST00000111829 2073 ntTSL 5 BASIC12.68□□□□□ -0.38
Trav4-4-dv10A0A075B651 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav4-4-dv10A0A075B651 Snx8-201ENSMUST00000031539 2627 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav4-4-dv10A0A075B651 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav4-4-dv10A0A075B651 Sdsl-201ENSMUST00000031594 1476 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav4-4-dv10A0A075B651 Arntl-201ENSMUST00000047321 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav4-4-dv10A0A075B651 Asic1-205ENSMUST00000228185 1818 ntBASIC12.68□□□□□ -0.38
Trav4-4-dv10A0A075B651 Gm12527-201ENSMUST00000117967 564 ntBASIC12.68□□□□□ -0.38
Trav4-4-dv10A0A075B651 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC12.68□□□□□ -0.38
Trav4-4-dv10A0A075B651 Gm14641-201ENSMUST00000136486 452 ntTSL 3 BASIC12.68□□□□□ -0.38
Trav4-4-dv10A0A075B651 Stmn1-201ENSMUST00000030636 1060 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav4-4-dv10A0A075B651 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav4-4-dv10A0A075B651 Tox2-201ENSMUST00000099110 2166 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
Trav4-4-dv10A0A075B651 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav4-4-dv10A0A075B651 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav4-4-dv10A0A075B651 Trim54-201ENSMUST00000013771 1434 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav4-4-dv10A0A075B651 Ing4-205ENSMUST00000140131 1446 ntAPPRIS ALT1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav4-4-dv10A0A075B651 Tubb6-201ENSMUST00000001513 1757 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav4-4-dv10A0A075B651 Lefty2-201ENSMUST00000085797 2473 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav4-4-dv10A0A075B651 Zfp264-201ENSMUST00000208656 1563 ntBASIC12.68□□□□□ -0.38
Trav4-4-dv10A0A075B651 Snx1-201ENSMUST00000034946 2073 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav4-4-dv10A0A075B651 Pdk1-201ENSMUST00000006669 5185 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav4-4-dv10A0A075B651 Kcnj6-202ENSMUST00000099508 3086 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav4-4-dv10A0A075B651 Sh2d4a-201ENSMUST00000066594 2718 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
Trav4-4-dv10A0A075B651 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav4-4-dv10A0A075B651 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Trav4-4-dv10A0A075B651 Cuedc1-201ENSMUST00000018522 3180 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav4-4-dv10A0A075B651 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Trav4-4-dv10A0A075B651 Ssfa2-202ENSMUST00000111785 5168 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav4-4-dv10A0A075B651 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav4-4-dv10A0A075B651 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav4-4-dv10A0A075B651 Tgfb1i1-205ENSMUST00000165667 1812 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trav4-4-dv10A0A075B651 Lbp-202ENSMUST00000109491 1322 ntTSL 2 BASIC12.67□□□□□ -0.38
Trav4-4-dv10A0A075B651 Ergic3-202ENSMUST00000088650 1349 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trav4-4-dv10A0A075B651 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav4-4-dv10A0A075B651 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trav4-4-dv10A0A075B651 Edem2-201ENSMUST00000040833 2290 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav4-4-dv10A0A075B651 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC12.67□□□□□ -0.38
Trav4-4-dv10A0A075B651 Foxc2-201ENSMUST00000054691 2725 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
Trav4-4-dv10A0A075B651 Ubtf-207ENSMUST00000128016 1062 ntTSL 2 BASIC12.67□□□□□ -0.38
Trav4-4-dv10A0A075B651 Creb1-207ENSMUST00000187811 1255 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trav4-4-dv10A0A075B651 Impa1-204ENSMUST00000191670 1100 ntTSL 2 BASIC12.67□□□□□ -0.38
Trav4-4-dv10A0A075B651 Gm16042-201ENSMUST00000204813 1247 ntBASIC12.67□□□□□ -0.38
Trav4-4-dv10A0A075B651 Gm46218-201ENSMUST00000215448 801 ntTSL 5 BASIC12.67□□□□□ -0.38
Trav4-4-dv10A0A075B651 Mvb12a-201ENSMUST00000034272 1062 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav4-4-dv10A0A075B651 Grid2-201ENSMUST00000095852 5860 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav4-4-dv10A0A075B651 Snapc3-201ENSMUST00000030206 1405 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav4-4-dv10A0A075B651 Stpg1-201ENSMUST00000063707 2380 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav4-4-dv10A0A075B651 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav4-4-dv10A0A075B651 D430001F17Rik-201ENSMUST00000141344 1858 ntTSL 5 BASIC12.67□□□□□ -0.38
Trav4-4-dv10A0A075B651 Mon1b-201ENSMUST00000035777 4998 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav4-4-dv10A0A075B651 Ttll11-202ENSMUST00000112976 3077 ntAPPRIS ALT2 TSL 5 BASIC12.67□□□□□ -0.38
Trav4-4-dv10A0A075B651 Papd4-205ENSMUST00000225868 3081 ntAPPRIS ALT1 BASIC12.67□□□□□ -0.38
Trav4-4-dv10A0A075B651 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav4-4-dv10A0A075B651 Dhx33-202ENSMUST00000108527 5184 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav4-4-dv10A0A075B651 Rnf220-203ENSMUST00000102690 1842 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
Trav4-4-dv10A0A075B651 Dlc1-203ENSMUST00000098826 6241 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav4-4-dv10A0A075B651 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav4-4-dv10A0A075B651 Adck1-204ENSMUST00000222695 2253 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
Trav4-4-dv10A0A075B651 Ccdc166-201ENSMUST00000182172 2584 ntBASIC12.67□□□□□ -0.38
Trav4-4-dv10A0A075B651 Mios-201ENSMUST00000040017 3710 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav4-4-dv10A0A075B651 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Trav4-4-dv10A0A075B651 Hsd17b4-201ENSMUST00000025385 2684 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav4-4-dv10A0A075B651 Agap1-202ENSMUST00000074945 10069 ntTSL 5 BASIC12.66□□□□□ -0.38
Trav4-4-dv10A0A075B651 Dok2-201ENSMUST00000022698 1795 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav4-4-dv10A0A075B651 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav4-4-dv10A0A075B651 Paip2-201ENSMUST00000041314 1475 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav4-4-dv10A0A075B651 Sh2b1-201ENSMUST00000032978 3393 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav4-4-dv10A0A075B651 Col2a1-201ENSMUST00000023123 5104 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trav4-4-dv10A0A075B651 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav4-4-dv10A0A075B651 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav4-4-dv10A0A075B651 Cog8-202ENSMUST00000095517 4476 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav4-4-dv10A0A075B651 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav4-4-dv10A0A075B651 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav4-4-dv10A0A075B651 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav4-4-dv10A0A075B651 Ypel3-204ENSMUST00000106359 469 ntTSL 5 BASIC12.66□□□□□ -0.38
Trav4-4-dv10A0A075B651 Rint1-204ENSMUST00000117783 560 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trav4-4-dv10A0A075B651 Gm36967-201ENSMUST00000193814 266 ntBASIC12.66□□□□□ -0.38
Trav4-4-dv10A0A075B651 Rps12-206ENSMUST00000218221 460 ntTSL 5 BASIC12.66□□□□□ -0.38
Trav4-4-dv10A0A075B651 Pkn2-201ENSMUST00000043812 6207 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav4-4-dv10A0A075B651 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trav4-4-dv10A0A075B651 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav4-4-dv10A0A075B651 Gaa-202ENSMUST00000106258 1369 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trav4-4-dv10A0A075B651 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav4-4-dv10A0A075B651 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
Trav4-4-dv10A0A075B651 Gabrd-201ENSMUST00000030925 1921 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav4-4-dv10A0A075B651 Disc1-206ENSMUST00000118942 2860 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav4-4-dv10A0A075B651 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC12.66□□□□□ -0.38
Trav4-4-dv10A0A075B651 Samd4-204ENSMUST00000125688 1773 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
Trav4-4-dv10A0A075B651 Kif1c-201ENSMUST00000072187 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav4-4-dv10A0A075B651 Casp8ap2-201ENSMUST00000029950 6799 ntAPPRIS P2 TSL 1 (best) BASIC12.66□□□□□ -0.38
Trav4-4-dv10A0A075B651 Fam46b-201ENSMUST00000051676 2287 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav4-4-dv10A0A075B651 Rasgef1b-206ENSMUST00000161516 2523 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Trav4-4-dv10A0A075B651 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav4-4-dv10A0A075B651 Fam208a-201ENSMUST00000022450 7590 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Trav4-4-dv10A0A075B651 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav4-4-dv10A0A075B651 Stradb-201ENSMUST00000027185 2960 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Trav4-4-dv10A0A075B651 Slc37a4-203ENSMUST00000213388 2344 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 26.1 ms