Protein–RNA interactions for Protein: A0A075B649

Trav13-2, T cell receptor alpha variable 13-2 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13-2A0A075B649 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.65
Trav13-2A0A075B649 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trav13-2A0A075B649 Rasgef1b-205ENSMUST00000161148 2430 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Trav13-2A0A075B649 Zmym4-201ENSMUST00000106108 7102 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trav13-2A0A075B649 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trav13-2A0A075B649 Cnbd2-201ENSMUST00000037096 2277 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trav13-2A0A075B649 Lrrfip1-212ENSMUST00000189617 2155 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trav13-2A0A075B649 Vstm5-201ENSMUST00000034413 1991 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trav13-2A0A075B649 Nr1h2-201ENSMUST00000073488 1999 ntAPPRIS P3 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trav13-2A0A075B649 Arpc5-201ENSMUST00000077755 1914 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trav13-2A0A075B649 Klhdc8b-201ENSMUST00000035232 1897 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trav13-2A0A075B649 Rundc3a-202ENSMUST00000107102 1837 ntAPPRIS ALT2 TSL 5 BASIC10.96□□□□□ -0.65
Trav13-2A0A075B649 Wdr13-202ENSMUST00000115623 1749 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.65
Trav13-2A0A075B649 Slc25a39-202ENSMUST00000107098 1606 ntAPPRIS ALT1 TSL 5 BASIC10.96□□□□□ -0.65
Trav13-2A0A075B649 Wdr45-201ENSMUST00000043045 1609 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trav13-2A0A075B649 Casp3-201ENSMUST00000093517 1520 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trav13-2A0A075B649 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trav13-2A0A075B649 Ghrhr-202ENSMUST00000203241 1328 ntTSL 1 (best) BASIC10.96□□□□□ -0.65
Trav13-2A0A075B649 Praf2-201ENSMUST00000033489 1339 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trav13-2A0A075B649 Gm24841-201ENSMUST00000158676 357 ntBASIC10.96□□□□□ -0.65
Trav13-2A0A075B649 Gm37292-201ENSMUST00000192062 758 ntBASIC10.96□□□□□ -0.65
Trav13-2A0A075B649 1110004E09Rik-201ENSMUST00000023694 1143 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trav13-2A0A075B649 Syngr1-202ENSMUST00000009728 819 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.65
Trav13-2A0A075B649 Spock3-204ENSMUST00000119068 3201 ntAPPRIS P3 TSL 5 BASIC10.96□□□□□ -0.66
Trav13-2A0A075B649 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Trav13-2A0A075B649 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Trav13-2A0A075B649 Kctd8-201ENSMUST00000054095 2859 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.66
Trav13-2A0A075B649 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC10.96□□□□□ -0.66
Trav13-2A0A075B649 Tap1-201ENSMUST00000041633 2614 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.66
Trav13-2A0A075B649 Men1-203ENSMUST00000079327 2639 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.66
Trav13-2A0A075B649 Rhot1-202ENSMUST00000055056 4260 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.66
Trav13-2A0A075B649 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC10.96□□□□□ -0.66
Trav13-2A0A075B649 Cgn-204ENSMUST00000155485 2361 ntTSL 2 BASIC10.96□□□□□ -0.66
Trav13-2A0A075B649 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Trav13-2A0A075B649 Rbm47-203ENSMUST00000113724 2186 ntAPPRIS P3 TSL 5 BASIC10.96□□□□□ -0.66
Trav13-2A0A075B649 Cspp1-203ENSMUST00000118263 2162 ntTSL 1 (best) BASIC10.96□□□□□ -0.66
Trav13-2A0A075B649 Slc6a8-206ENSMUST00000164449 2151 ntTSL 5 BASIC10.96□□□□□ -0.66
Trav13-2A0A075B649 Taf6l-212ENSMUST00000177216 2167 ntAPPRIS P1 TSL 5 BASIC10.96□□□□□ -0.66
Trav13-2A0A075B649 Dars-201ENSMUST00000027602 2175 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Trav13-2A0A075B649 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Trav13-2A0A075B649 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.66
Trav13-2A0A075B649 Smpdl3a-201ENSMUST00000020022 1961 ntAPPRIS P1 TSL 1 (best) BASIC10.96□□□□□ -0.66
Trav13-2A0A075B649 Upf1-202ENSMUST00000215817 4518 ntAPPRIS ALT2 TSL 1 (best) BASIC10.96□□□□□ -0.66
Trav13-2A0A075B649 Gm26852-201ENSMUST00000180691 5751 ntTSL 5 BASIC10.96□□□□□ -0.66
Trav13-2A0A075B649 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav13-2A0A075B649 Spout1-201ENSMUST00000100220 1805 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav13-2A0A075B649 Usb1-201ENSMUST00000034245 1758 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav13-2A0A075B649 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav13-2A0A075B649 Galnt17-202ENSMUST00000160609 2875 ntTSL 5 BASIC10.95□□□□□ -0.66
Trav13-2A0A075B649 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC10.95□□□□□ -0.66
Trav13-2A0A075B649 Fbxo7-203ENSMUST00000120344 1655 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav13-2A0A075B649 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav13-2A0A075B649 Gm37812-201ENSMUST00000195216 2475 ntBASIC10.95□□□□□ -0.66
Trav13-2A0A075B649 Mccc1-201ENSMUST00000029259 2455 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav13-2A0A075B649 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav13-2A0A075B649 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
Trav13-2A0A075B649 Cpsf4-207ENSMUST00000162244 1387 ntAPPRIS P4 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav13-2A0A075B649 AU022751-202ENSMUST00000117544 2201 ntAPPRIS P4 BASIC10.95□□□□□ -0.66
Trav13-2A0A075B649 G3bp2-202ENSMUST00000164378 3026 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav13-2A0A075B649 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav13-2A0A075B649 Naa10-205ENSMUST00000114390 797 ntTSL 5 BASIC10.95□□□□□ -0.66
Trav13-2A0A075B649 Prss16-204ENSMUST00000150547 1159 ntTSL 3 BASIC10.95□□□□□ -0.66
Trav13-2A0A075B649 Cox8a-201ENSMUST00000039758 545 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav13-2A0A075B649 Ly6g6d-201ENSMUST00000007259 546 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav13-2A0A075B649 Crb3-202ENSMUST00000097299 1206 ntAPPRIS P3 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav13-2A0A075B649 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC10.95□□□□□ -0.66
Trav13-2A0A075B649 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC10.95□□□□□ -0.66
Trav13-2A0A075B649 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC10.95□□□□□ -0.66
Trav13-2A0A075B649 Gm8189-202ENSMUST00000211035 2039 ntTSL 5 BASIC10.95□□□□□ -0.66
Trav13-2A0A075B649 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Trav13-2A0A075B649 Otp-201ENSMUST00000022195 2656 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav13-2A0A075B649 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav13-2A0A075B649 Bend5-201ENSMUST00000030274 1826 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav13-2A0A075B649 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC10.95□□□□□ -0.66
Trav13-2A0A075B649 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Trav13-2A0A075B649 Prss53-202ENSMUST00000205300 1662 ntTSL 1 (best) BASIC10.95□□□□□ -0.66
Trav13-2A0A075B649 AC093043.3-201ENSMUST00000226531 2273 ntBASIC10.95□□□□□ -0.66
Trav13-2A0A075B649 Prkra-201ENSMUST00000002808 1614 ntAPPRIS P1 TSL 1 (best) BASIC10.95□□□□□ -0.66
Trav13-2A0A075B649 Mapk9-210ENSMUST00000178543 4677 ntAPPRIS ALT1 TSL 5 BASIC10.94□□□□□ -0.66
Trav13-2A0A075B649 Gm45212-201ENSMUST00000205831 3403 ntBASIC10.94□□□□□ -0.66
Trav13-2A0A075B649 Prss53-201ENSMUST00000121394 2134 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav13-2A0A075B649 Wnt10b-206ENSMUST00000228546 2709 ntBASIC10.94□□□□□ -0.66
Trav13-2A0A075B649 Cdc23-201ENSMUST00000025228 2084 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Trav13-2A0A075B649 Foxp4-202ENSMUST00000113262 3198 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav13-2A0A075B649 Pdzd4-202ENSMUST00000114438 3625 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav13-2A0A075B649 Pam-210ENSMUST00000161567 3630 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Trav13-2A0A075B649 Adgrb2-201ENSMUST00000030571 4734 ntAPPRIS ALT2 TSL 5 BASIC10.94□□□□□ -0.66
Trav13-2A0A075B649 Fnbp1-205ENSMUST00000113552 1910 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Trav13-2A0A075B649 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav13-2A0A075B649 Snx9-201ENSMUST00000002436 2411 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav13-2A0A075B649 Cdc27-202ENSMUST00000106961 1863 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Trav13-2A0A075B649 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC10.94□□□□□ -0.66
Trav13-2A0A075B649 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC10.94□□□□□ -0.66
Trav13-2A0A075B649 Spats2l-212ENSMUST00000170139 2315 ntAPPRIS P1 TSL 5 BASIC10.94□□□□□ -0.66
Trav13-2A0A075B649 Snrnp35-202ENSMUST00000111453 1181 ntAPPRIS P1 TSL 2 BASIC10.94□□□□□ -0.66
Trav13-2A0A075B649 Gm12933-201ENSMUST00000120203 872 ntBASIC10.94□□□□□ -0.66
Trav13-2A0A075B649 Gm27275-201ENSMUST00000184318 272 ntBASIC10.94□□□□□ -0.66
Trav13-2A0A075B649 Rab34-209ENSMUST00000207728 567 ntTSL 2 BASIC10.94□□□□□ -0.66
Trav13-2A0A075B649 Gm10602-201ENSMUST00000098239 609 ntBASIC10.94□□□□□ -0.66
Trav13-2A0A075B649 Taf6l-213ENSMUST00000189739 1794 ntTSL 5 BASIC10.94□□□□□ -0.66
Retrieved 100 of 76,532 protein–RNA pairs in 24.3 ms