Protein–RNA interactions for Protein: A0A075B644

Trav13-1, T cell receptor alpha variable 13-1 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13-1A0A075B644 Hbs1l-203ENSMUST00000092674 2625 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Trav13-1A0A075B644 Nfe2l3-201ENSMUST00000005103 2544 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav13-1A0A075B644 Nisch-221ENSMUST00000171735 1763 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Trav13-1A0A075B644 Cct6b-201ENSMUST00000021040 1787 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav13-1A0A075B644 Nagpa-203ENSMUST00000147567 2230 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav13-1A0A075B644 A430078I02Rik-202ENSMUST00000154066 2233 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Trav13-1A0A075B644 Slbp-203ENSMUST00000101354 1578 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav13-1A0A075B644 March2-201ENSMUST00000066121 3400 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Trav13-1A0A075B644 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC11.59□□□□□ -0.55
Trav13-1A0A075B644 Gm9917-202ENSMUST00000181099 1499 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Trav13-1A0A075B644 Pdgfa-203ENSMUST00000110896 1363 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Trav13-1A0A075B644 Isyna1-204ENSMUST00000210005 1914 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Trav13-1A0A075B644 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Trav13-1A0A075B644 Wnt10b-204ENSMUST00000226655 1807 ntBASIC11.59□□□□□ -0.55
Trav13-1A0A075B644 Blvrb-204ENSMUST00000133750 509 ntTSL 2 BASIC11.59□□□□□ -0.55
Trav13-1A0A075B644 Sytl3-204ENSMUST00000159880 1296 ntTSL 5 BASIC11.59□□□□□ -0.55
Trav13-1A0A075B644 Gm45328-201ENSMUST00000210942 917 ntBASIC11.59□□□□□ -0.55
Trav13-1A0A075B644 Gm18115-201ENSMUST00000221209 621 ntBASIC11.59□□□□□ -0.55
Trav13-1A0A075B644 Odf3b-201ENSMUST00000049968 1040 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav13-1A0A075B644 Hist1h2af-201ENSMUST00000073261 399 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
Trav13-1A0A075B644 Exosc5-201ENSMUST00000079634 1020 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav13-1A0A075B644 Rsbn1-202ENSMUST00000068879 6712 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav13-1A0A075B644 A830073O21Rik-202ENSMUST00000205693 3096 ntBASIC11.59□□□□□ -0.55
Trav13-1A0A075B644 Abcg5-202ENSMUST00000163375 1613 ntTSL 5 BASIC11.59□□□□□ -0.55
Trav13-1A0A075B644 Gm3468-201ENSMUST00000165193 1955 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Trav13-1A0A075B644 Gm2956-201ENSMUST00000177786 1955 ntAPPRIS P1 TSL 5 BASIC11.59□□□□□ -0.55
Trav13-1A0A075B644 9430097D07Rik-201ENSMUST00000100190 1501 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
Trav13-1A0A075B644 Cldn6-201ENSMUST00000024699 1506 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav13-1A0A075B644 Rsu1-201ENSMUST00000028059 1546 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav13-1A0A075B644 Gm20628-201ENSMUST00000177363 3215 ntBASIC11.59□□□□□ -0.55
Trav13-1A0A075B644 Ccdc184-201ENSMUST00000031914 2329 ntAPPRIS P1 BASIC11.59□□□□□ -0.55
Trav13-1A0A075B644 BC030336-201ENSMUST00000060175 4831 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav13-1A0A075B644 Tbcb-201ENSMUST00000006254 1416 ntAPPRIS P1 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav13-1A0A075B644 Fam57b-207ENSMUST00000207020 1777 ntTSL 1 (best) BASIC11.59□□□□□ -0.55
Trav13-1A0A075B644 Diaph2-201ENSMUST00000037854 3742 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav13-1A0A075B644 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav13-1A0A075B644 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC11.59□□□□□ -0.55
Trav13-1A0A075B644 Dscc1-201ENSMUST00000023059 1324 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav13-1A0A075B644 Iqcd-202ENSMUST00000094391 1673 ntAPPRIS P2 TSL 1 (best) BASIC11.59□□□□□ -0.55
Trav13-1A0A075B644 Tfdp2-201ENSMUST00000034982 7354 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.55
Trav13-1A0A075B644 Tenm3-204ENSMUST00000110346 2267 ntTSL 1 (best) BASIC11.58□□□□□ -0.55
Trav13-1A0A075B644 Fam129c-208ENSMUST00000143662 2267 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.55
Trav13-1A0A075B644 Gpr137b-201ENSMUST00000021738 2971 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.55
Trav13-1A0A075B644 Cryl1-201ENSMUST00000022517 1497 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav13-1A0A075B644 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav13-1A0A075B644 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Trav13-1A0A075B644 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Trav13-1A0A075B644 Eda-209ENSMUST00000113783 4930 ntTSL 5 BASIC11.58□□□□□ -0.56
Trav13-1A0A075B644 Arfip1-202ENSMUST00000107687 1714 ntTSL 5 BASIC11.58□□□□□ -0.56
Trav13-1A0A075B644 Sec61a1-201ENSMUST00000032168 3172 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav13-1A0A075B644 Fbxo31-201ENSMUST00000059018 4358 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav13-1A0A075B644 Rps27a-202ENSMUST00000102845 791 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav13-1A0A075B644 Psme2-208ENSMUST00000161807 962 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav13-1A0A075B644 Gm19553-201ENSMUST00000175723 494 ntTSL 5 BASIC11.58□□□□□ -0.56
Trav13-1A0A075B644 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Trav13-1A0A075B644 Rpl36al-201ENSMUST00000054544 526 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav13-1A0A075B644 Sftpb-201ENSMUST00000070437 1131 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Trav13-1A0A075B644 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav13-1A0A075B644 Ran-201ENSMUST00000031383 2377 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav13-1A0A075B644 Ccdc126-201ENSMUST00000055559 2351 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav13-1A0A075B644 Wipf3-204ENSMUST00000132855 4516 ntAPPRIS P4 TSL 5 BASIC11.58□□□□□ -0.56
Trav13-1A0A075B644 Irf5-205ENSMUST00000167252 1693 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav13-1A0A075B644 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav13-1A0A075B644 Mmd-201ENSMUST00000004050 2677 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav13-1A0A075B644 Pcolce-202ENSMUST00000054564 1585 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Trav13-1A0A075B644 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav13-1A0A075B644 Gm14029-201ENSMUST00000151051 1348 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Trav13-1A0A075B644 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Trav13-1A0A075B644 Ing1-202ENSMUST00000209565 1971 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Trav13-1A0A075B644 Atf4-201ENSMUST00000109605 1724 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav13-1A0A075B644 Kcnn1-201ENSMUST00000110078 4047 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav13-1A0A075B644 Kcnn1-202ENSMUST00000110081 4045 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Trav13-1A0A075B644 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav13-1A0A075B644 Katnbl1-201ENSMUST00000028552 2886 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav13-1A0A075B644 Relt-201ENSMUST00000008462 2851 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav13-1A0A075B644 Hdhd2-202ENSMUST00000097521 1716 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Trav13-1A0A075B644 Zbtb22-201ENSMUST00000053429 2611 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav13-1A0A075B644 Wdr55-201ENSMUST00000049323 1498 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav13-1A0A075B644 Bicd2-203ENSMUST00000110085 4588 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav13-1A0A075B644 Sox18-201ENSMUST00000054491 1620 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav13-1A0A075B644 Sec24a-204ENSMUST00000109097 6581 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav13-1A0A075B644 Susd1-202ENSMUST00000107544 3220 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Trav13-1A0A075B644 Atf6b-202ENSMUST00000173984 2315 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Trav13-1A0A075B644 Susd1-201ENSMUST00000040166 3295 ntAPPRIS P2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav13-1A0A075B644 Podnl1-201ENSMUST00000093380 2090 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav13-1A0A075B644 Fgf8-205ENSMUST00000111927 843 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav13-1A0A075B644 Srpx-202ENSMUST00000115543 1218 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav13-1A0A075B644 Gm15890-201ENSMUST00000161024 770 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Trav13-1A0A075B644 Fbxo6-208ENSMUST00000168503 1240 ntAPPRIS P1 TSL 2 BASIC11.57□□□□□ -0.56
Trav13-1A0A075B644 Cd70-201ENSMUST00000019633 842 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav13-1A0A075B644 Gm19935-201ENSMUST00000209208 979 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav13-1A0A075B644 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC11.57□□□□□ -0.56
Trav13-1A0A075B644 Sdhaf4-201ENSMUST00000027338 683 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav13-1A0A075B644 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav13-1A0A075B644 Fbxl19-204ENSMUST00000188580 2601 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav13-1A0A075B644 Itga5-201ENSMUST00000023128 4382 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav13-1A0A075B644 Rilpl1-201ENSMUST00000062153 2249 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav13-1A0A075B644 Pacsin1-202ENSMUST00000097360 1800 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Trav13-1A0A075B644 Tlnrd1-201ENSMUST00000094216 4433 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Trav13-1A0A075B644 Aspscr1-205ENSMUST00000106160 1550 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 44.6 ms