Protein–RNA interactions for Protein: A0A075B624

Trav15d-1-dv6d-1, T cell receptor alpha variable 15D-1-DV6D-1 (Fragment), mousemouse

Predictions only

Length 124 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav15d-1-dv6d-1A0A075B624 Ankle2-206ENSMUST00000197188 4077 ntAPPRIS P3 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav15d-1-dv6d-1A0A075B624 Shcbp1l-201ENSMUST00000042373 2092 ntAPPRIS P1 TSL 1 (best) BASIC13.86□□□□□ -0.19
Trav15d-1-dv6d-1A0A075B624 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC13.86□□□□□ -0.19
Trav15d-1-dv6d-1A0A075B624 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav15d-1-dv6d-1A0A075B624 Npnt-206ENSMUST00000117811 4532 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Trav15d-1-dv6d-1A0A075B624 Ggnbp2-203ENSMUST00000108081 3034 ntAPPRIS P2 TSL 5 BASIC13.85□□□□□ -0.19
Trav15d-1-dv6d-1A0A075B624 Rtp2-201ENSMUST00000061030 2421 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav15d-1-dv6d-1A0A075B624 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav15d-1-dv6d-1A0A075B624 Map4-201ENSMUST00000035055 6091 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav15d-1-dv6d-1A0A075B624 Tmem47-203ENSMUST00000171953 1801 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav15d-1-dv6d-1A0A075B624 Cacnb4-201ENSMUST00000078324 8225 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Trav15d-1-dv6d-1A0A075B624 Gm6190-201ENSMUST00000220683 1374 ntBASIC13.85□□□□□ -0.19
Trav15d-1-dv6d-1A0A075B624 Ccdc124-201ENSMUST00000007865 1356 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav15d-1-dv6d-1A0A075B624 Hsdl2-201ENSMUST00000030078 2611 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav15d-1-dv6d-1A0A075B624 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav15d-1-dv6d-1A0A075B624 Fam81a-201ENSMUST00000034749 3703 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav15d-1-dv6d-1A0A075B624 Lrrfip2-201ENSMUST00000035078 3260 ntTSL 5 BASIC13.85□□□□□ -0.19
Trav15d-1-dv6d-1A0A075B624 Isl2-201ENSMUST00000034869 1854 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav15d-1-dv6d-1A0A075B624 Atxn7l2-203ENSMUST00000117784 2387 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav15d-1-dv6d-1A0A075B624 AC133083.1-201ENSMUST00000221736 2209 ntBASIC13.85□□□□□ -0.19
Trav15d-1-dv6d-1A0A075B624 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav15d-1-dv6d-1A0A075B624 Krt88-201ENSMUST00000023781 903 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav15d-1-dv6d-1A0A075B624 Lsm10-201ENSMUST00000055575 943 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav15d-1-dv6d-1A0A075B624 Cdkn1a-201ENSMUST00000023829 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav15d-1-dv6d-1A0A075B624 Klf5-201ENSMUST00000005279 3352 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav15d-1-dv6d-1A0A075B624 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Trav15d-1-dv6d-1A0A075B624 Rbmxl1-202ENSMUST00000211719 1622 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav15d-1-dv6d-1A0A075B624 Ascl2-201ENSMUST00000009392 1605 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav15d-1-dv6d-1A0A075B624 Gfra2-202ENSMUST00000227633 1480 ntBASIC13.85□□□□□ -0.19
Trav15d-1-dv6d-1A0A075B624 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav15d-1-dv6d-1A0A075B624 Oas1b-201ENSMUST00000086377 1832 ntTSL 5 BASIC13.85□□□□□ -0.19
Trav15d-1-dv6d-1A0A075B624 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Trav15d-1-dv6d-1A0A075B624 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav15d-1-dv6d-1A0A075B624 Poli-203ENSMUST00000159389 2662 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Trav15d-1-dv6d-1A0A075B624 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav15d-1-dv6d-1A0A075B624 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav15d-1-dv6d-1A0A075B624 Ddx50-201ENSMUST00000020270 2535 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav15d-1-dv6d-1A0A075B624 Fam160a2-203ENSMUST00000118726 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav15d-1-dv6d-1A0A075B624 Actl10-201ENSMUST00000104928 1501 ntAPPRIS P1 BASIC13.85□□□□□ -0.19
Trav15d-1-dv6d-1A0A075B624 Actl10-202ENSMUST00000226583 1501 ntBASIC13.85□□□□□ -0.19
Trav15d-1-dv6d-1A0A075B624 Ogg1-201ENSMUST00000032406 1549 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Trav15d-1-dv6d-1A0A075B624 Trim7-202ENSMUST00000109213 2356 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
Trav15d-1-dv6d-1A0A075B624 Sucla2-203ENSMUST00000160507 2229 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav15d-1-dv6d-1A0A075B624 Metrn-202ENSMUST00000165838 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav15d-1-dv6d-1A0A075B624 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav15d-1-dv6d-1A0A075B624 Gm9867-201ENSMUST00000192212 2647 ntBASIC13.84□□□□□ -0.19
Trav15d-1-dv6d-1A0A075B624 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Trav15d-1-dv6d-1A0A075B624 Ankrd10-201ENSMUST00000033905 2285 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav15d-1-dv6d-1A0A075B624 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav15d-1-dv6d-1A0A075B624 Plac9a-201ENSMUST00000052286 1555 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav15d-1-dv6d-1A0A075B624 Pnkp-202ENSMUST00000098478 1550 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Trav15d-1-dv6d-1A0A075B624 Usp31-201ENSMUST00000046929 10198 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Trav15d-1-dv6d-1A0A075B624 Tmem229b-201ENSMUST00000056660 3860 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav15d-1-dv6d-1A0A075B624 Nhlrc4-201ENSMUST00000085027 2142 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav15d-1-dv6d-1A0A075B624 Tra2a-201ENSMUST00000031841 1799 ntAPPRIS P3 TSL 5 BASIC13.84□□□□□ -0.19
Trav15d-1-dv6d-1A0A075B624 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav15d-1-dv6d-1A0A075B624 Crem-228ENSMUST00000150235 2662 ntAPPRIS P2 TSL 5 BASIC13.84□□□□□ -0.19
Trav15d-1-dv6d-1A0A075B624 Anks6-201ENSMUST00000084616 3552 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Trav15d-1-dv6d-1A0A075B624 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav15d-1-dv6d-1A0A075B624 Nipal2-201ENSMUST00000040791 4331 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav15d-1-dv6d-1A0A075B624 Gm16861-201ENSMUST00000181498 1647 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Trav15d-1-dv6d-1A0A075B624 Rps6ka1-201ENSMUST00000003741 3085 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Trav15d-1-dv6d-1A0A075B624 3110002H16Rik-201ENSMUST00000025276 2170 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav15d-1-dv6d-1A0A075B624 Fnbp1-208ENSMUST00000113560 4726 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav15d-1-dv6d-1A0A075B624 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav15d-1-dv6d-1A0A075B624 Echdc2-204ENSMUST00000116309 1238 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav15d-1-dv6d-1A0A075B624 Unc50-203ENSMUST00000118059 1179 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Trav15d-1-dv6d-1A0A075B624 Serf1-204ENSMUST00000151821 570 ntTSL 2 BASIC13.84□□□□□ -0.19
Trav15d-1-dv6d-1A0A075B624 Casp3-203ENSMUST00000210534 583 ntTSL 5 BASIC13.84□□□□□ -0.19
Trav15d-1-dv6d-1A0A075B624 Gm17949-201ENSMUST00000210548 1179 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Trav15d-1-dv6d-1A0A075B624 Tomm20-202ENSMUST00000212771 458 ntTSL 2 BASIC13.84□□□□□ -0.19
Trav15d-1-dv6d-1A0A075B624 Park7-201ENSMUST00000030805 908 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav15d-1-dv6d-1A0A075B624 Npffr1-201ENSMUST00000020287 3479 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Trav15d-1-dv6d-1A0A075B624 Pcyt1a-202ENSMUST00000104893 4951 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Trav15d-1-dv6d-1A0A075B624 Ube2o-201ENSMUST00000082152 5205 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav15d-1-dv6d-1A0A075B624 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC13.84□□□□□ -0.19
Trav15d-1-dv6d-1A0A075B624 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC13.84□□□□□ -0.19
Trav15d-1-dv6d-1A0A075B624 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Trav15d-1-dv6d-1A0A075B624 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Trav15d-1-dv6d-1A0A075B624 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Trav15d-1-dv6d-1A0A075B624 Tprn-201ENSMUST00000114336 2787 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Trav15d-1-dv6d-1A0A075B624 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Trav15d-1-dv6d-1A0A075B624 Zfp995-205ENSMUST00000190066 2221 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
Trav15d-1-dv6d-1A0A075B624 Nrn1-201ENSMUST00000037623 1619 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav15d-1-dv6d-1A0A075B624 Kcnq4-201ENSMUST00000030376 3919 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Trav15d-1-dv6d-1A0A075B624 Ehmt2-202ENSMUST00000078061 3746 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav15d-1-dv6d-1A0A075B624 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav15d-1-dv6d-1A0A075B624 Zbtb25-201ENSMUST00000167011 1681 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
Trav15d-1-dv6d-1A0A075B624 Nucb2-201ENSMUST00000032895 1685 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav15d-1-dv6d-1A0A075B624 3110082J24Rik-201ENSMUST00000127749 327 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Trav15d-1-dv6d-1A0A075B624 Gm44924-201ENSMUST00000138087 421 ntTSL 3 BASIC13.83□□□□□ -0.2
Trav15d-1-dv6d-1A0A075B624 Lactbl1-201ENSMUST00000178843 2954 ntAPPRIS P1 TSL 5 BASIC13.83□□□□□ -0.2
Trav15d-1-dv6d-1A0A075B624 AC135637.1-201ENSMUST00000227750 365 ntBASIC13.83□□□□□ -0.2
Trav15d-1-dv6d-1A0A075B624 Mtx2-201ENSMUST00000028511 2950 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav15d-1-dv6d-1A0A075B624 Srpr-201ENSMUST00000034541 2993 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav15d-1-dv6d-1A0A075B624 Med29-201ENSMUST00000003536 1281 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav15d-1-dv6d-1A0A075B624 Usp43-201ENSMUST00000021288 4462 ntAPPRIS P3 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav15d-1-dv6d-1A0A075B624 Ankra2-201ENSMUST00000022164 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Trav15d-1-dv6d-1A0A075B624 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC13.83□□□□□ -0.2
Trav15d-1-dv6d-1A0A075B624 Gm26755-201ENSMUST00000180703 2657 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 38.6 ms