Protein–RNA interactions for Protein: A0A075B621

Trav6n-5, T cell receptor alpha variable 6N-5 (Fragment), mousemouse

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav6n-5A0A075B621 Pdgfa-201ENSMUST00000046901 1543 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trav6n-5A0A075B621 Cry1-201ENSMUST00000020227 3026 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav6n-5A0A075B621 Axin1-201ENSMUST00000074370 3777 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav6n-5A0A075B621 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav6n-5A0A075B621 Mrap2-203ENSMUST00000179313 2039 ntAPPRIS P1 TSL 2 BASIC12.63□□□□□ -0.39
Trav6n-5A0A075B621 Agbl3-205ENSMUST00000115017 3719 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav6n-5A0A075B621 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav6n-5A0A075B621 AC159205.3-201ENSMUST00000224614 874 ntBASIC12.63□□□□□ -0.39
Trav6n-5A0A075B621 Nenf-201ENSMUST00000046770 742 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav6n-5A0A075B621 Lgals7-201ENSMUST00000081457 754 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav6n-5A0A075B621 Prodh2-201ENSMUST00000058280 1853 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Trav6n-5A0A075B621 Spire2-202ENSMUST00000212404 2158 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Trav6n-5A0A075B621 Ythdc2-201ENSMUST00000037763 7215 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav6n-5A0A075B621 Fbxo30-202ENSMUST00000129456 5060 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav6n-5A0A075B621 Plch2-212ENSMUST00000186598 2119 ntTSL 5 BASIC12.62□□□□□ -0.39
Trav6n-5A0A075B621 Uxs1-202ENSMUST00000126008 4620 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav6n-5A0A075B621 Vgll3-201ENSMUST00000168064 7009 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav6n-5A0A075B621 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trav6n-5A0A075B621 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav6n-5A0A075B621 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav6n-5A0A075B621 Lamc1-201ENSMUST00000027752 7622 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav6n-5A0A075B621 R74862-202ENSMUST00000133630 2482 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trav6n-5A0A075B621 Kif12-201ENSMUST00000030042 2250 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav6n-5A0A075B621 Pcdhb22-201ENSMUST00000097609 2266 ntTSL 2 BASIC12.62□□□□□ -0.39
Trav6n-5A0A075B621 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav6n-5A0A075B621 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav6n-5A0A075B621 Itpripl1-201ENSMUST00000110386 1898 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav6n-5A0A075B621 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav6n-5A0A075B621 Phc2-201ENSMUST00000030588 3949 ntAPPRIS P3 TSL 5 BASIC12.62□□□□□ -0.39
Trav6n-5A0A075B621 Gm5297-201ENSMUST00000198555 1171 ntBASIC12.62□□□□□ -0.39
Trav6n-5A0A075B621 Ppp1cb-206ENSMUST00000202078 383 ntTSL 5 BASIC12.62□□□□□ -0.39
Trav6n-5A0A075B621 Emc9-201ENSMUST00000022828 855 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav6n-5A0A075B621 Eps8l1-201ENSMUST00000086372 2522 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav6n-5A0A075B621 Fdft1-204ENSMUST00000224625 3698 ntAPPRIS P1 BASIC12.62□□□□□ -0.39
Trav6n-5A0A075B621 Plekha4-207ENSMUST00000211227 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav6n-5A0A075B621 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav6n-5A0A075B621 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trav6n-5A0A075B621 Slc25a3-201ENSMUST00000076694 1612 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav6n-5A0A075B621 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav6n-5A0A075B621 Gm10564-201ENSMUST00000097750 3113 ntTSL 1 (best) BASIC12.62□□□□□ -0.39
Trav6n-5A0A075B621 Acsl3-201ENSMUST00000035779 3950 ntAPPRIS P1 TSL 1 (best) BASIC12.62□□□□□ -0.39
Trav6n-5A0A075B621 Lmnb1-201ENSMUST00000025486 2843 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav6n-5A0A075B621 Gm10584-201ENSMUST00000207036 2628 ntBASIC12.61□□□□□ -0.39
Trav6n-5A0A075B621 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trav6n-5A0A075B621 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav6n-5A0A075B621 Rassf3-201ENSMUST00000026902 3522 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav6n-5A0A075B621 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav6n-5A0A075B621 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav6n-5A0A075B621 Pfkfb4-201ENSMUST00000051873 3316 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trav6n-5A0A075B621 Platr31-201ENSMUST00000180653 1466 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trav6n-5A0A075B621 Osr1-201ENSMUST00000057021 2012 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav6n-5A0A075B621 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trav6n-5A0A075B621 App-207ENSMUST00000227737 2827 ntBASIC12.61□□□□□ -0.39
Trav6n-5A0A075B621 Thop1-201ENSMUST00000005057 2832 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav6n-5A0A075B621 Tecr-203ENSMUST00000165740 1120 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trav6n-5A0A075B621 Exosc3-201ENSMUST00000030003 1077 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav6n-5A0A075B621 Tmem205-201ENSMUST00000046831 785 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav6n-5A0A075B621 Ppp1r37-201ENSMUST00000058444 3816 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav6n-5A0A075B621 Klc1-202ENSMUST00000118471 2272 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trav6n-5A0A075B621 Irf2bpl-201ENSMUST00000038422 4098 ntAPPRIS P1 BASIC12.61□□□□□ -0.39
Trav6n-5A0A075B621 Hebp2-203ENSMUST00000214548 2083 ntTSL 1 (best) BASIC12.61□□□□□ -0.39
Trav6n-5A0A075B621 Lrrc32-203ENSMUST00000205956 4576 ntAPPRIS P1 TSL 5 BASIC12.61□□□□□ -0.39
Trav6n-5A0A075B621 Slc24a4-202ENSMUST00000159329 4465 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav6n-5A0A075B621 Pagr1a-202ENSMUST00000200948 1430 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav6n-5A0A075B621 Gm42742-205ENSMUST00000202798 1412 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav6n-5A0A075B621 Des-201ENSMUST00000027409 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav6n-5A0A075B621 Ldha-201ENSMUST00000005051 1766 ntAPPRIS P1 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav6n-5A0A075B621 Sirt6-202ENSMUST00000119324 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC12.61□□□□□ -0.39
Trav6n-5A0A075B621 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trav6n-5A0A075B621 Hsd17b12-201ENSMUST00000028619 1902 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav6n-5A0A075B621 Anks1b-202ENSMUST00000099366 2549 ntTSL 5 BASIC12.6□□□□□ -0.39
Trav6n-5A0A075B621 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trav6n-5A0A075B621 6430573F11Rik-205ENSMUST00000171777 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav6n-5A0A075B621 Wnt10b-204ENSMUST00000226655 1807 ntBASIC12.6□□□□□ -0.39
Trav6n-5A0A075B621 Gabbr1-202ENSMUST00000172789 1460 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trav6n-5A0A075B621 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav6n-5A0A075B621 Cog6-204ENSMUST00000193432 2078 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trav6n-5A0A075B621 Cryzl1-201ENSMUST00000073466 1965 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trav6n-5A0A075B621 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav6n-5A0A075B621 Slc45a4-204ENSMUST00000132607 2457 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trav6n-5A0A075B621 Tspan2os-201ENSMUST00000146624 590 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trav6n-5A0A075B621 Cracr2b-207ENSMUST00000170879 1158 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Trav6n-5A0A075B621 Coro1a-209ENSMUST00000173108 1170 ntTSL 5 BASIC12.6□□□□□ -0.39
Trav6n-5A0A075B621 Abraxas1-202ENSMUST00000055245 2139 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav6n-5A0A075B621 Lamp2-201ENSMUST00000016678 1769 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav6n-5A0A075B621 Jph4-201ENSMUST00000022819 4489 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav6n-5A0A075B621 Pde4b-208ENSMUST00000106911 3020 ntAPPRIS ALT1 TSL 5 BASIC12.6□□□□□ -0.39
Trav6n-5A0A075B621 Slc25a39-201ENSMUST00000018821 1685 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav6n-5A0A075B621 Gm10814-201ENSMUST00000180505 1933 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Trav6n-5A0A075B621 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav6n-5A0A075B621 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav6n-5A0A075B621 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav6n-5A0A075B621 Akirin1-201ENSMUST00000102636 3052 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav6n-5A0A075B621 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav6n-5A0A075B621 Camsap1-201ENSMUST00000091268 7978 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Trav6n-5A0A075B621 Gm44729-201ENSMUST00000206759 2052 ntBASIC12.6□□□□□ -0.39
Trav6n-5A0A075B621 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav6n-5A0A075B621 Rassf7-208ENSMUST00000209500 1560 ntAPPRIS ALT2 TSL 5 BASIC12.6□□□□□ -0.39
Trav6n-5A0A075B621 Rnls-201ENSMUST00000096114 1597 ntAPPRIS P1 TSL 1 (best) BASIC12.6□□□□□ -0.39
Trav6n-5A0A075B621 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC12.6□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 32.8 ms