Protein–RNA interactions for Protein: A0A075B620

Trav7n-4, T cell receptor alpha variable 7N-4 (Fragment), mousemouse

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav7n-4A0A075B620 Dlg5-202ENSMUST00000073687 7784 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Trav7n-4A0A075B620 Tsc22d1-214ENSMUST00000177207 1476 ntTSL 3 BASIC12.36□□□□□ -0.43
Trav7n-4A0A075B620 Fbxl21-202ENSMUST00000121095 798 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Trav7n-4A0A075B620 D330023K18Rik-201ENSMUST00000133550 920 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Trav7n-4A0A075B620 Gm21168-201ENSMUST00000199646 1096 ntBASIC12.36□□□□□ -0.43
Trav7n-4A0A075B620 Nagpa-201ENSMUST00000023911 2143 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav7n-4A0A075B620 Snrpc-201ENSMUST00000071006 870 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav7n-4A0A075B620 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav7n-4A0A075B620 Trip10-202ENSMUST00000224152 1812 ntAPPRIS ALT2 BASIC12.36□□□□□ -0.43
Trav7n-4A0A075B620 St8sia5-201ENSMUST00000075290 1841 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Trav7n-4A0A075B620 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav7n-4A0A075B620 Itgav-202ENSMUST00000111740 6788 ntAPPRIS ALT2 TSL 5 BASIC12.36□□□□□ -0.43
Trav7n-4A0A075B620 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Trav7n-4A0A075B620 Zfp444-201ENSMUST00000054680 2467 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav7n-4A0A075B620 Zkscan17-202ENSMUST00000101150 3771 ntTSL 1 (best) BASIC12.36□□□□□ -0.43
Trav7n-4A0A075B620 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav7n-4A0A075B620 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav7n-4A0A075B620 Zfp212-201ENSMUST00000009411 2801 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav7n-4A0A075B620 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav7n-4A0A075B620 Acot7-206ENSMUST00000167926 1505 ntAPPRIS P4 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav7n-4A0A075B620 Gm45472-201ENSMUST00000211295 1426 ntTSL 5 BASIC12.36□□□□□ -0.43
Trav7n-4A0A075B620 Spock1-201ENSMUST00000172326 1320 ntAPPRIS P3 TSL 5 BASIC12.36□□□□□ -0.43
Trav7n-4A0A075B620 Tyro3-201ENSMUST00000028763 3989 ntAPPRIS P3 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav7n-4A0A075B620 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC12.36□□□□□ -0.43
Trav7n-4A0A075B620 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav7n-4A0A075B620 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav7n-4A0A075B620 Gm14634-201ENSMUST00000139163 1662 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trav7n-4A0A075B620 Slc38a10-203ENSMUST00000076697 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav7n-4A0A075B620 Evc-202ENSMUST00000114148 2119 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav7n-4A0A075B620 Slc3a2-202ENSMUST00000170157 2813 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav7n-4A0A075B620 Abl1-201ENSMUST00000028190 5794 ntAPPRIS P3 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav7n-4A0A075B620 Dyrk3-201ENSMUST00000016670 3164 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav7n-4A0A075B620 Gm42901-201ENSMUST00000197735 3171 ntBASIC12.35□□□□□ -0.43
Trav7n-4A0A075B620 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav7n-4A0A075B620 Cilp2-201ENSMUST00000057831 4314 ntAPPRIS P1 TSL 5 BASIC12.35□□□□□ -0.43
Trav7n-4A0A075B620 Hand1-203ENSMUST00000160392 1806 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav7n-4A0A075B620 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav7n-4A0A075B620 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC12.35□□□□□ -0.43
Trav7n-4A0A075B620 Nfu1-202ENSMUST00000117583 950 ntAPPRIS ALT2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav7n-4A0A075B620 Scamp4-202ENSMUST00000180350 1271 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav7n-4A0A075B620 Tmbim4-201ENSMUST00000020446 904 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav7n-4A0A075B620 Gm40460-201ENSMUST00000211591 735 ntAPPRIS P1 BASIC12.35□□□□□ -0.43
Trav7n-4A0A075B620 Ccr9-202ENSMUST00000163559 3004 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav7n-4A0A075B620 Pacsin3-201ENSMUST00000028694 1862 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav7n-4A0A075B620 Casc4-204ENSMUST00000110586 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav7n-4A0A075B620 Men1-204ENSMUST00000113500 2742 ntAPPRIS P2 TSL 5 BASIC12.35□□□□□ -0.43
Trav7n-4A0A075B620 Gm27528-202ENSMUST00000222916 2012 ntBASIC12.35□□□□□ -0.43
Trav7n-4A0A075B620 1700001O22Rik-201ENSMUST00000050003 1672 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav7n-4A0A075B620 Nap1l4-209ENSMUST00000209098 2281 ntAPPRIS P1 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav7n-4A0A075B620 Cdkl3-209ENSMUST00000120374 2770 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Trav7n-4A0A075B620 Kif21a-203ENSMUST00000100304 6439 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Trav7n-4A0A075B620 Kif21a-202ENSMUST00000088614 6439 ntAPPRIS ALT2 TSL 5 BASIC12.35□□□□□ -0.43
Trav7n-4A0A075B620 Tmem266-201ENSMUST00000034862 2408 ntAPPRIS P2 TSL 1 (best) BASIC12.35□□□□□ -0.43
Trav7n-4A0A075B620 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav7n-4A0A075B620 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav7n-4A0A075B620 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC12.34□□□□□ -0.43
Trav7n-4A0A075B620 Krt15-201ENSMUST00000107411 1700 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav7n-4A0A075B620 Atp5c1-202ENSMUST00000114896 1735 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trav7n-4A0A075B620 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav7n-4A0A075B620 Lmcd1-201ENSMUST00000032376 1730 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav7n-4A0A075B620 Oas1g-201ENSMUST00000086368 1977 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav7n-4A0A075B620 Cfap206-201ENSMUST00000029971 2246 ntAPPRIS P1 TSL 5 BASIC12.34□□□□□ -0.43
Trav7n-4A0A075B620 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC12.34□□□□□ -0.43
Trav7n-4A0A075B620 Tnip2-203ENSMUST00000114359 1642 ntTSL 5 BASIC12.34□□□□□ -0.43
Trav7n-4A0A075B620 Mms22l-205ENSMUST00000138567 1350 ntTSL 2 BASIC12.34□□□□□ -0.43
Trav7n-4A0A075B620 AC163637.1-201ENSMUST00000215491 1894 ntBASIC12.34□□□□□ -0.43
Trav7n-4A0A075B620 Fam76a-202ENSMUST00000097856 1863 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trav7n-4A0A075B620 Asb2-204ENSMUST00000149431 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav7n-4A0A075B620 Il11ra1-204ENSMUST00000108042 1768 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav7n-4A0A075B620 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav7n-4A0A075B620 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Trav7n-4A0A075B620 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav7n-4A0A075B620 Agps-201ENSMUST00000047232 7359 ntAPPRIS P2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav7n-4A0A075B620 Dlgap3-202ENSMUST00000106092 2901 ntTSL 5 BASIC12.34□□□□□ -0.43
Trav7n-4A0A075B620 Mrps18c-203ENSMUST00000112901 820 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav7n-4A0A075B620 E130307A14Rik-208ENSMUST00000145971 830 ntTSL 3 BASIC12.34□□□□□ -0.43
Trav7n-4A0A075B620 Gm5408-201ENSMUST00000197998 747 ntBASIC12.34□□□□□ -0.43
Trav7n-4A0A075B620 Gm45337-201ENSMUST00000210537 1267 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Trav7n-4A0A075B620 Gm45822-201ENSMUST00000212231 259 ntTSL 3 BASIC12.34□□□□□ -0.43
Trav7n-4A0A075B620 9630013D21Rik-204ENSMUST00000156790 3096 ntTSL 1 (best) BASIC12.34□□□□□ -0.43
Trav7n-4A0A075B620 Hsph1-209ENSMUST00000202089 3054 ntTSL 5 BASIC12.34□□□□□ -0.43
Trav7n-4A0A075B620 Ccdc50-203ENSMUST00000100026 7089 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav7n-4A0A075B620 Ppp6r2-208ENSMUST00000228284 3297 ntAPPRIS P1 BASIC12.34□□□□□ -0.43
Trav7n-4A0A075B620 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC12.34□□□□□ -0.43
Trav7n-4A0A075B620 Ddc-202ENSMUST00000109659 1954 ntAPPRIS P1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav7n-4A0A075B620 Cdhr5-201ENSMUST00000080654 2133 ntAPPRIS P3 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav7n-4A0A075B620 Slc44a2-210ENSMUST00000217461 3478 ntAPPRIS ALT1 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav7n-4A0A075B620 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC12.34□□□□□ -0.43
Trav7n-4A0A075B620 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.43
Trav7n-4A0A075B620 Zbtb46-202ENSMUST00000087409 2577 ntTSL 1 (best) BASIC12.33□□□□□ -0.43
Trav7n-4A0A075B620 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav7n-4A0A075B620 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC12.33□□□□□ -0.44
Trav7n-4A0A075B620 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav7n-4A0A075B620 Nrxn1-209ENSMUST00000161402 4953 ntTSL 5 BASIC12.33□□□□□ -0.44
Trav7n-4A0A075B620 Ggnbp2-211ENSMUST00000168434 3056 ntAPPRIS ALT1 TSL 5 BASIC12.33□□□□□ -0.44
Trav7n-4A0A075B620 Adamts14-201ENSMUST00000092486 5188 ntAPPRIS P2 TSL 1 (best) BASIC12.33□□□□□ -0.44
Trav7n-4A0A075B620 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Trav7n-4A0A075B620 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC12.33□□□□□ -0.44
Trav7n-4A0A075B620 Pet117-201ENSMUST00000183618 693 ntAPPRIS P1 TSL 2 BASIC12.33□□□□□ -0.44
Trav7n-4A0A075B620 Gm10138-203ENSMUST00000206952 366 ntBASIC12.33□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 20.8 ms