Protein–RNA interactions for Protein: Q9UN37

VPS4A, Vacuolar protein sorting-associated protein 4A, humanhuman

Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4AQ9UN37 AC079780.1-201ENST00000428259 207 ntBASIC3.69□□□□□ -1.82
VPS4AQ9UN37 AL355303.1-201ENST00000428920 680 ntTSL 3 BASIC3.69□□□□□ -1.82
VPS4AQ9UN37 HMGN2P31-201ENST00000432430 273 ntBASIC3.69□□□□□ -1.82
VPS4AQ9UN37 BNIP3P2-201ENST00000441221 577 ntBASIC3.69□□□□□ -1.82
VPS4AQ9UN37 AL671855.1-201ENST00000446875 1203 ntBASIC3.69□□□□□ -1.82
VPS4AQ9UN37 RNU7-182P-201ENST00000459009 62 ntBASIC3.69□□□□□ -1.82
VPS4AQ9UN37 SNORA59A-201ENST00000459326 152 ntBASIC3.69□□□□□ -1.82
VPS4AQ9UN37 RPL21P11-201ENST00000461458 483 ntBASIC3.69□□□□□ -1.82
VPS4AQ9UN37 RN7SL432P-201ENST00000484057 298 ntBASIC3.69□□□□□ -1.82
VPS4AQ9UN37 AL163973.1-201ENST00000484753 577 ntBASIC3.69□□□□□ -1.82
VPS4AQ9UN37 AC024022.1-202ENST00000508911 394 ntTSL 2 BASIC3.69□□□□□ -1.82
VPS4AQ9UN37 AC093206.1-201ENST00000515364 497 ntTSL 3 BASIC3.69□□□□□ -1.82
VPS4AQ9UN37 RN7SKP219-201ENST00000516825 296 ntBASIC3.69□□□□□ -1.82
VPS4AQ9UN37 AC008489.1-201ENST00000524271 483 ntBASIC3.69□□□□□ -1.82
VPS4AQ9UN37 AC103843.2-201ENST00000530523 682 ntBASIC3.69□□□□□ -1.82
VPS4AQ9UN37 SDHAF2-203ENST00000534878 523 ntTSL 2 BASIC3.69□□□□□ -1.82
VPS4AQ9UN37 AC055720.1-201ENST00000539552 475 ntTSL 5 BASIC3.69□□□□□ -1.82
VPS4AQ9UN37 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC3.69□□□□□ -1.82
VPS4AQ9UN37 NCAPGP2-201ENST00000557911 754 ntBASIC3.69□□□□□ -1.82
VPS4AQ9UN37 AC026470.3-201ENST00000563994 438 ntTSL 3 BASIC3.69□□□□□ -1.82
VPS4AQ9UN37 AC003687.1-201ENST00000578040 427 ntTSL 3 BASIC3.69□□□□□ -1.82
VPS4AQ9UN37 NRBF2P5-201ENST00000603087 788 ntBASIC3.69□□□□□ -1.82
VPS4AQ9UN37 AL670379.6-201ENST00000603753 252 ntBASIC3.69□□□□□ -1.82
VPS4AQ9UN37 AL670379.11-201ENST00000604059 253 ntBASIC3.69□□□□□ -1.82
VPS4AQ9UN37 AC008162.1-201ENST00000604718 254 ntBASIC3.69□□□□□ -1.82
VPS4AQ9UN37 AL670379.1-201ENST00000604752 252 ntBASIC3.69□□□□□ -1.82
VPS4AQ9UN37 AL670379.5-201ENST00000605253 252 ntBASIC3.69□□□□□ -1.82
VPS4AQ9UN37 AL670379.12-201ENST00000605291 253 ntBASIC3.69□□□□□ -1.82
VPS4AQ9UN37 AL670379.8-201ENST00000605353 252 ntBASIC3.69□□□□□ -1.82
VPS4AQ9UN37 AL670379.7-201ENST00000605823 252 ntBASIC3.69□□□□□ -1.82
VPS4AQ9UN37 AL354950.2-201ENST00000617939 290 ntBASIC3.69□□□□□ -1.82
VPS4AQ9UN37 Hammerhead_HH10.1-201ENST00000620658 125 ntBASIC3.69□□□□□ -1.82
VPS4AQ9UN37 AL360181.4-201ENST00000621752 134 ntBASIC3.69□□□□□ -1.82
VPS4AQ9UN37 AC110801.1-201ENST00000623590 212 ntBASIC3.69□□□□□ -1.82
VPS4AQ9UN37 MIR3662-201ENST00000637030 95 ntBASIC3.69□□□□□ -1.82
VPS4AQ9UN37 WNK3-205ENST00000620763 5400 ntTSL 5 BASIC3.69□□□□□ -1.82
VPS4AQ9UN37 ADGRL4-201ENST00000370742 3527 ntAPPRIS P1 TSL 1 (best) BASIC3.69□□□□□ -1.82
VPS4AQ9UN37 NAIP-205ENST00000508426 4153 ntTSL 1 (best) BASIC3.69□□□□□ -1.82
VPS4AQ9UN37 MTCO1P12-201ENST00000414273 1543 ntBASIC3.69□□□□□ -1.82
VPS4AQ9UN37 AC108750.1-201ENST00000637986 2706 ntAPPRIS P1 TSL 4 BASIC3.69□□□□□ -1.82
VPS4AQ9UN37 USP8P1-201ENST00000494673 3183 ntBASIC3.69□□□□□ -1.82
VPS4AQ9UN37 ADGRV1-201ENST00000405460 19557 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
VPS4AQ9UN37 TTC21B-AS1-201ENST00000440322 2260 ntTSL 4 BASIC3.68□□□□□ -1.82
VPS4AQ9UN37 GABPAP-201ENST00000419271 1356 ntBASIC3.68□□□□□ -1.82
VPS4AQ9UN37 RNU6-188P-201ENST00000364207 107 ntBASIC3.68□□□□□ -1.82
VPS4AQ9UN37 RNA5SP97-201ENST00000365006 84 ntBASIC3.68□□□□□ -1.82
VPS4AQ9UN37 TSHB-202ENST00000369517 474 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
VPS4AQ9UN37 SMIM11P1-201ENST00000369586 178 ntBASIC3.68□□□□□ -1.82
VPS4AQ9UN37 PTMAP5-201ENST00000393073 333 ntBASIC3.68□□□□□ -1.82
VPS4AQ9UN37 AL591416.1-201ENST00000404015 867 ntBASIC3.68□□□□□ -1.82
VPS4AQ9UN37 HSPE1P26-201ENST00000405341 275 ntBASIC3.68□□□□□ -1.82
VPS4AQ9UN37 TXNP7-201ENST00000406296 293 ntBASIC3.68□□□□□ -1.82
VPS4AQ9UN37 AL357500.1-201ENST00000413004 279 ntTSL 3 BASIC3.68□□□□□ -1.82
VPS4AQ9UN37 RPL30P2-201ENST00000414021 291 ntBASIC3.68□□□□□ -1.82
VPS4AQ9UN37 AC051618.1-201ENST00000414295 207 ntTSL 3 BASIC3.68□□□□□ -1.82
VPS4AQ9UN37 AC114491.1-201ENST00000416095 246 ntBASIC3.68□□□□□ -1.82
VPS4AQ9UN37 AC011243.1-201ENST00000420184 415 ntTSL 3 BASIC3.68□□□□□ -1.82
VPS4AQ9UN37 RAC1P6-201ENST00000423911 575 ntBASIC3.68□□□□□ -1.82
VPS4AQ9UN37 RPL21P112-201ENST00000434403 463 ntBASIC3.68□□□□□ -1.82
VPS4AQ9UN37 CYCSP43-201ENST00000438233 310 ntBASIC3.68□□□□□ -1.82
VPS4AQ9UN37 MTND3P10-201ENST00000450967 341 ntBASIC3.68□□□□□ -1.82
VPS4AQ9UN37 RPL23AP14-201ENST00000468281 468 ntBASIC3.68□□□□□ -1.82
VPS4AQ9UN37 RN7SL330P-201ENST00000469709 307 ntBASIC3.68□□□□□ -1.82
VPS4AQ9UN37 AC078785.3-201ENST00000476607 425 ntBASIC3.68□□□□□ -1.82
VPS4AQ9UN37 RPL39P36-201ENST00000490784 156 ntBASIC3.68□□□□□ -1.82
VPS4AQ9UN37 NAF1-205ENST00000509434 385 ntTSL 3 BASIC3.68□□□□□ -1.82
VPS4AQ9UN37 AC074250.1-201ENST00000511117 192 ntBASIC3.68□□□□□ -1.82
VPS4AQ9UN37 RNA5SP401-201ENST00000515920 127 ntBASIC3.68□□□□□ -1.82
VPS4AQ9UN37 SNORA31.3-201ENST00000516029 96 ntBASIC3.68□□□□□ -1.82
VPS4AQ9UN37 RNU4ATAC8P-201ENST00000516196 109 ntBASIC3.68□□□□□ -1.82
VPS4AQ9UN37 SNORD60.2-201ENST00000516883 86 ntBASIC3.68□□□□□ -1.82
VPS4AQ9UN37 RNA5SP179-201ENST00000517284 121 ntBASIC3.68□□□□□ -1.82
VPS4AQ9UN37 IGKV2D-19-201ENST00000523346 262 ntBASIC3.68□□□□□ -1.82
VPS4AQ9UN37 AC099520.1-206ENST00000523434 486 ntTSL 3 BASIC3.68□□□□□ -1.82
VPS4AQ9UN37 OR5B19P-201ENST00000531766 928 ntBASIC3.68□□□□□ -1.82
VPS4AQ9UN37 AC008083.3-201ENST00000547777 329 ntTSL 3 BASIC3.68□□□□□ -1.82
VPS4AQ9UN37 AC093012.1-202ENST00000549403 582 ntBASIC3.68□□□□□ -1.82
VPS4AQ9UN37 AL160237.1-201ENST00000554526 572 ntTSL 4 BASIC3.68□□□□□ -1.82
VPS4AQ9UN37 OR4H12P-201ENST00000556269 907 ntBASIC3.68□□□□□ -1.82
VPS4AQ9UN37 AC090607.4-201ENST00000558192 369 ntTSL 3 BASIC3.68□□□□□ -1.82
VPS4AQ9UN37 AC090877.1-201ENST00000561418 344 ntBASIC3.68□□□□□ -1.82
VPS4AQ9UN37 MIR4298-201ENST00000584380 73 ntBASIC3.68□□□□□ -1.82
VPS4AQ9UN37 AF038458.1-201ENST00000588406 262 ntBASIC3.68□□□□□ -1.82
VPS4AQ9UN37 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC3.68□□□□□ -1.82
VPS4AQ9UN37 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC3.68□□□□□ -1.82
VPS4AQ9UN37 AC091167.4-201ENST00000605079 184 ntBASIC3.68□□□□□ -1.82
VPS4AQ9UN37 U3.45-201ENST00000607547 219 ntBASIC3.68□□□□□ -1.82
VPS4AQ9UN37 DISC2.1-201ENST00000612827 205 ntBASIC3.68□□□□□ -1.82
VPS4AQ9UN37 AC005344.1-201ENST00000613391 459 ntBASIC3.68□□□□□ -1.82
VPS4AQ9UN37 AC025253.1-201ENST00000613623 543 ntBASIC3.68□□□□□ -1.82
VPS4AQ9UN37 AC006504.8-201ENST00000621046 635 ntBASIC3.68□□□□□ -1.82
VPS4AQ9UN37 AC092628.2-201ENST00000622492 339 ntBASIC3.68□□□□□ -1.82
VPS4AQ9UN37 AC135584.1-201ENST00000624438 333 ntTSL 5 BASIC3.68□□□□□ -1.82
VPS4AQ9UN37 CAB39L-206ENST00000410043 1627 ntAPPRIS P1 TSL 1 (best) BASIC3.68□□□□□ -1.82
VPS4AQ9UN37 TDRD1-202ENST00000369280 4062 ntAPPRIS ALT2 TSL 5 BASIC3.68□□□□□ -1.82
VPS4AQ9UN37 MCF2-203ENST00000370576 3688 ntAPPRIS P3 TSL 1 (best) BASIC3.68□□□□□ -1.82
VPS4AQ9UN37 AGTR1-208ENST00000475347 1669 ntAPPRIS P1 TSL 3 BASIC3.68□□□□□ -1.82
VPS4AQ9UN37 RHOT1-204ENST00000394692 2960 ntTSL 2 BASIC3.67□□□□□ -1.82
VPS4AQ9UN37 TMEM71-202ENST00000377901 1861 ntAPPRIS ALT2 TSL 1 (best) BASIC3.67□□□□□ -1.82
VPS4AQ9UN37 FLG-AS1-205ENST00000445097 2857 ntTSL 1 (best) BASIC3.67□□□□□ -1.82
Retrieved 100 of 98,524 protein–RNA pairs in 107.6 ms