Protein–RNA interactions for Protein: Q9P0L0

VAPA, Vesicle-associated membrane protein-associated protein A, humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPAQ9P0L0 BPY2DP-201ENST00000422208 265 ntBASIC2.02□□□□□ -2.09
VAPAQ9P0L0 PTP4A1P7-201ENST00000423476 514 ntBASIC2.02□□□□□ -2.09
VAPAQ9P0L0 AC013262.1-201ENST00000426710 252 ntBASIC2.02□□□□□ -2.09
VAPAQ9P0L0 AC113331.1-201ENST00000428160 869 ntTSL 2 BASIC2.02□□□□□ -2.09
VAPAQ9P0L0 AC006946.1-201ENST00000429106 328 ntBASIC2.02□□□□□ -2.09
VAPAQ9P0L0 AL139118.1-201ENST00000432707 446 ntTSL 3 BASIC2.02□□□□□ -2.09
VAPAQ9P0L0 AC025033.1-201ENST00000463883 194 ntBASIC2.02□□□□□ -2.09
VAPAQ9P0L0 AC090515.1-201ENST00000465295 476 ntBASIC2.02□□□□□ -2.09
VAPAQ9P0L0 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC2.02□□□□□ -2.09
VAPAQ9P0L0 AC021382.1-201ENST00000483523 359 ntBASIC2.02□□□□□ -2.09
VAPAQ9P0L0 AC108517.1-201ENST00000512546 327 ntTSL 3 BASIC2.02□□□□□ -2.09
VAPAQ9P0L0 SNORA31.6-201ENST00000516241 130 ntBASIC2.02□□□□□ -2.09
VAPAQ9P0L0 MIR514B-201ENST00000516774 80 ntBASIC2.02□□□□□ -2.09
VAPAQ9P0L0 AP003497.1-201ENST00000528472 562 ntBASIC2.02□□□□□ -2.09
VAPAQ9P0L0 AC118942.1-201ENST00000529674 1035 ntBASIC2.02□□□□□ -2.09
VAPAQ9P0L0 AC010186.2-204ENST00000537668 439 ntBASIC2.02□□□□□ -2.09
VAPAQ9P0L0 AC016229.1-201ENST00000589242 487 ntTSL 5 BASIC2.02□□□□□ -2.09
VAPAQ9P0L0 AL121917.1-203ENST00000605534 577 ntBASIC2.02□□□□□ -2.09
VAPAQ9P0L0 AL589743.7-201ENST00000612637 233 ntBASIC2.02□□□□□ -2.09
VAPAQ9P0L0 LINC02246-204ENST00000625278 740 ntTSL 5 BASIC2.02□□□□□ -2.09
VAPAQ9P0L0 HMHB1-202ENST00000638299 126 ntAPPRIS P2 TSL 1 (best) BASIC2.02□□□□□ -2.09
VAPAQ9P0L0 LIPI-203ENST00000536861 1529 ntAPPRIS ALT2 TSL 1 (best) BASIC2.01□□□□□ -2.09
VAPAQ9P0L0 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC2.01□□□□□ -2.09
VAPAQ9P0L0 C2orf73-208ENST00000615983 1376 ntTSL 1 (best) BASIC2.01□□□□□ -2.09
VAPAQ9P0L0 OR5B3-201ENST00000309403 945 ntAPPRIS P1 BASIC2.01□□□□□ -2.09
VAPAQ9P0L0 AL161781.1-201ENST00000354277 403 ntBASIC2.01□□□□□ -2.09
VAPAQ9P0L0 snoZ40.1-201ENST00000364540 72 ntBASIC2.01□□□□□ -2.09
VAPAQ9P0L0 RPA3-203ENST00000401447 414 ntTSL 3 BASIC2.01□□□□□ -2.09
VAPAQ9P0L0 MTCO1P56-201ENST00000401674 224 ntBASIC2.01□□□□□ -2.09
VAPAQ9P0L0 MRLN-201ENST00000414264 422 ntAPPRIS P2 TSL 1 (best) BASIC2.01□□□□□ -2.09
VAPAQ9P0L0 AC006369.2-201ENST00000431712 384 ntTSL 3 BASIC2.01□□□□□ -2.09
VAPAQ9P0L0 AC236972.1-201ENST00000433225 199 ntBASIC2.01□□□□□ -2.09
VAPAQ9P0L0 AL360169.1-201ENST00000435116 143 ntTSL 5 BASIC2.01□□□□□ -2.09
VAPAQ9P0L0 AC069540.2-201ENST00000441776 351 ntTSL 3 BASIC2.01□□□□□ -2.09
VAPAQ9P0L0 EEF1B2P7-201ENST00000451177 676 ntBASIC2.01□□□□□ -2.09
VAPAQ9P0L0 DYNLL1P5-201ENST00000467158 270 ntBASIC2.01□□□□□ -2.09
VAPAQ9P0L0 AL160314.1-201ENST00000490836 438 ntBASIC2.01□□□□□ -2.09
VAPAQ9P0L0 RPL23AP49-201ENST00000492925 468 ntBASIC2.01□□□□□ -2.09
VAPAQ9P0L0 AC022493.1-201ENST00000492984 337 ntBASIC2.01□□□□□ -2.09
VAPAQ9P0L0 RPS27AP10-201ENST00000496103 208 ntBASIC2.01□□□□□ -2.09
VAPAQ9P0L0 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC2.01□□□□□ -2.09
VAPAQ9P0L0 PGRMC2-204ENST00000503872 1028 ntTSL 3 BASIC2.01□□□□□ -2.09
VAPAQ9P0L0 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC2.01□□□□□ -2.09
VAPAQ9P0L0 SNORA26.10-201ENST00000516427 141 ntBASIC2.01□□□□□ -2.09
VAPAQ9P0L0 SCARNA16.3-201ENST00000516595 184 ntBASIC2.01□□□□□ -2.09
VAPAQ9P0L0 HMGN1P28-201ENST00000521340 364 ntBASIC2.01□□□□□ -2.09
VAPAQ9P0L0 AP005902.1-201ENST00000521358 186 ntBASIC2.01□□□□□ -2.09
VAPAQ9P0L0 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC2.01□□□□□ -2.09
VAPAQ9P0L0 LINC00301-204ENST00000532591 470 ntTSL 2 BASIC2.01□□□□□ -2.09
VAPAQ9P0L0 AL138976.2-201ENST00000563989 694 ntBASIC2.01□□□□□ -2.09
VAPAQ9P0L0 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC2.01□□□□□ -2.09
VAPAQ9P0L0 AC233702.6-201ENST00000584594 396 ntTSL 3 BASIC2.01□□□□□ -2.09
VAPAQ9P0L0 AC008121.1-201ENST00000603244 268 ntBASIC2.01□□□□□ -2.09
VAPAQ9P0L0 AL357094.1-201ENST00000603845 844 ntBASIC2.01□□□□□ -2.09
VAPAQ9P0L0 AL021997.1-201ENST00000605757 193 ntBASIC2.01□□□□□ -2.09
VAPAQ9P0L0 AC007349.4-201ENST00000608114 532 ntBASIC2.01□□□□□ -2.09
VAPAQ9P0L0 SDR42E1P2-201ENST00000614861 481 ntBASIC2.01□□□□□ -2.09
VAPAQ9P0L0 AC023158.2-201ENST00000614876 543 ntBASIC2.01□□□□□ -2.09
VAPAQ9P0L0 AC009268.2-201ENST00000621925 457 ntBASIC2.01□□□□□ -2.09
VAPAQ9P0L0 AC073592.7-201ENST00000623659 507 ntBASIC2.01□□□□□ -2.09
VAPAQ9P0L0 AC243829.7-201ENST00000633081 225 ntBASIC2.01□□□□□ -2.09
VAPAQ9P0L0 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC2.01□□□□□ -2.09
VAPAQ9P0L0 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.01□□□□□ -2.09
VAPAQ9P0L0 AC006020.1-201ENST00000420179 1854 ntBASIC2.01□□□□□ -2.09
VAPAQ9P0L0 ZBED5-201ENST00000413761 2512 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
VAPAQ9P0L0 AL079343.1-201ENST00000572358 1771 ntBASIC2□□□□□ -2.09
VAPAQ9P0L0 SNORA63.3-201ENST00000362682 132 ntBASIC2□□□□□ -2.09
VAPAQ9P0L0 Y_RNA.110-201ENST00000363220 99 ntBASIC2□□□□□ -2.09
VAPAQ9P0L0 RNA5SP138-201ENST00000365098 114 ntBASIC2□□□□□ -2.09
VAPAQ9P0L0 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC2□□□□□ -2.09
VAPAQ9P0L0 MTCYBP38-201ENST00000417160 1123 ntBASIC2□□□□□ -2.09
VAPAQ9P0L0 BTF3L4P3-201ENST00000418879 476 ntBASIC2□□□□□ -2.09
VAPAQ9P0L0 UBE2E2-AS1-202ENST00000430018 499 ntTSL 2 BASIC2□□□□□ -2.09
VAPAQ9P0L0 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC2□□□□□ -2.09
VAPAQ9P0L0 KLF3P2-201ENST00000465138 268 ntBASIC2□□□□□ -2.09
VAPAQ9P0L0 AC072039.1-201ENST00000477611 581 ntBASIC2□□□□□ -2.09
VAPAQ9P0L0 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC2□□□□□ -2.09
VAPAQ9P0L0 RNY4P37-201ENST00000516225 96 ntBASIC2□□□□□ -2.09
VAPAQ9P0L0 RNA5SP290-201ENST00000517133 127 ntBASIC2□□□□□ -2.09
VAPAQ9P0L0 AC103798.1-201ENST00000532562 376 ntTSL 2 BASIC2□□□□□ -2.09
VAPAQ9P0L0 ZKSCAN7P1-201ENST00000543668 673 ntBASIC2□□□□□ -2.09
VAPAQ9P0L0 AL136520.1-202ENST00000555494 763 ntBASIC2□□□□□ -2.09
VAPAQ9P0L0 LINC2194-202ENST00000567624 506 ntTSL 3 BASIC2□□□□□ -2.09
VAPAQ9P0L0 AC126365.2-201ENST00000580630 379 ntBASIC2□□□□□ -2.09
VAPAQ9P0L0 AC024619.4-201ENST00000580924 316 ntBASIC2□□□□□ -2.09
VAPAQ9P0L0 LINC01899-203ENST00000584810 337 ntTSL 2 BASIC2□□□□□ -2.09
VAPAQ9P0L0 AC008507.2-201ENST00000588402 1176 ntBASIC2□□□□□ -2.09
VAPAQ9P0L0 LINC01897-203ENST00000591503 369 ntTSL 2 BASIC2□□□□□ -2.09
VAPAQ9P0L0 DNAJC19P3-201ENST00000594491 331 ntBASIC2□□□□□ -2.09
VAPAQ9P0L0 BNIP3P33-201ENST00000598912 569 ntBASIC2□□□□□ -2.09
VAPAQ9P0L0 AL450336.1-201ENST00000605180 586 ntBASIC2□□□□□ -2.09
VAPAQ9P0L0 AC239868.4-201ENST00000608318 671 ntBASIC2□□□□□ -2.09
VAPAQ9P0L0 AC018926.1-201ENST00000616335 435 ntBASIC2□□□□□ -2.09
VAPAQ9P0L0 MIR6132-201ENST00000622083 109 ntBASIC2□□□□□ -2.09
VAPAQ9P0L0 MTND5P6-201ENST00000422338 1798 ntBASIC2□□□□□ -2.09
VAPAQ9P0L0 AL359851.1-201ENST00000569460 4997 ntBASIC2□□□□□ -2.09
VAPAQ9P0L0 HSFY2-201ENST00000304790 1444 ntAPPRIS P5 TSL 1 (best) BASIC2□□□□□ -2.09
VAPAQ9P0L0 HSFY1-201ENST00000307393 1444 ntAPPRIS P5 TSL 1 (best) BASIC2□□□□□ -2.09
VAPAQ9P0L0 GPR22-201ENST00000304402 2942 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
VAPAQ9P0L0 EEF1E1-201ENST00000379715 1077 ntAPPRIS P1 TSL 1 (best) BASIC1.99□□□□□ -2.09
Retrieved 100 of 98,524 protein–RNA pairs in 106.8 ms