Protein–RNA interactions for Protein: Q9NZR4

VSX1, Visual system homeobox 1, humanhuman

Predicted RBP Predictions only

Length 365 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1Q9NZR4 TRAPPC2P2-201ENST00000517589 409 ntBASIC3.76□□□□□ -1.81
VSX1Q9NZR4 ATP5F1P5-201ENST00000526403 760 ntBASIC3.76□□□□□ -1.81
VSX1Q9NZR4 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC3.76□□□□□ -1.81
VSX1Q9NZR4 PRR4-206ENST00000540107 388 ntAPPRIS ALT2 TSL 3 BASIC3.76□□□□□ -1.81
VSX1Q9NZR4 PRB1-204ENST00000546254 1170 ntAPPRIS ALT2 TSL 5 BASIC3.76□□□□□ -1.81
VSX1Q9NZR4 LINC02305-201ENST00000554142 476 ntTSL 3 BASIC3.76□□□□□ -1.81
VSX1Q9NZR4 AC093515.1-201ENST00000567103 445 ntTSL 5 BASIC3.76□□□□□ -1.81
VSX1Q9NZR4 FAM60BP-201ENST00000578364 658 ntBASIC3.76□□□□□ -1.81
VSX1Q9NZR4 POLR3GP2-201ENST00000588366 668 ntBASIC3.76□□□□□ -1.81
VSX1Q9NZR4 AC104662.1-201ENST00000604448 511 ntBASIC3.76□□□□□ -1.81
VSX1Q9NZR4 CTHRC1P1-201ENST00000605383 469 ntBASIC3.76□□□□□ -1.81
VSX1Q9NZR4 AC007619.2-201ENST00000605743 379 ntBASIC3.76□□□□□ -1.81
VSX1Q9NZR4 AL512625.3-207ENST00000609749 477 ntTSL 3 BASIC3.76□□□□□ -1.81
VSX1Q9NZR4 AL360181.4-201ENST00000621752 134 ntBASIC3.76□□□□□ -1.81
VSX1Q9NZR4 AL133216.2-202ENST00000634512 349 ntBASIC3.76□□□□□ -1.81
VSX1Q9NZR4 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC3.76□□□□□ -1.81
VSX1Q9NZR4 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
VSX1Q9NZR4 AC069228.1-201ENST00000546936 1615 ntTSL 3 BASIC3.76□□□□□ -1.81
VSX1Q9NZR4 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
VSX1Q9NZR4 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC3.76□□□□□ -1.81
VSX1Q9NZR4 LINC00971-202ENST00000484892 7308 ntTSL 1 (best) BASIC3.76□□□□□ -1.81
VSX1Q9NZR4 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC3.76□□□□□ -1.81
VSX1Q9NZR4 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
VSX1Q9NZR4 GPR18-203ENST00000397473 1660 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
VSX1Q9NZR4 HEATR5B-201ENST00000233099 6905 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
VSX1Q9NZR4 ABCC9-201ENST00000261200 8293 ntAPPRIS P5 TSL 5 BASIC3.75□□□□□ -1.81
VSX1Q9NZR4 KERA-201ENST00000266719 2162 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
VSX1Q9NZR4 TAS2R13-201ENST00000390677 1637 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
VSX1Q9NZR4 RNU1-14P-201ENST00000362759 152 ntBASIC3.75□□□□□ -1.81
VSX1Q9NZR4 Y_RNA.128-201ENST00000363391 112 ntBASIC3.75□□□□□ -1.81
VSX1Q9NZR4 RNU6-593P-201ENST00000364716 112 ntBASIC3.75□□□□□ -1.81
VSX1Q9NZR4 RNA5SP219-201ENST00000390940 113 ntBASIC3.75□□□□□ -1.81
VSX1Q9NZR4 UBE2V1P2-201ENST00000397758 440 ntBASIC3.75□□□□□ -1.81
VSX1Q9NZR4 RPS12P24-201ENST00000412619 387 ntBASIC3.75□□□□□ -1.81
VSX1Q9NZR4 RPL37P10-201ENST00000412884 288 ntBASIC3.75□□□□□ -1.81
VSX1Q9NZR4 ATG3P1-201ENST00000419507 911 ntBASIC3.75□□□□□ -1.81
VSX1Q9NZR4 AC241644.2-201ENST00000426504 480 ntTSL 3 BASIC3.75□□□□□ -1.81
VSX1Q9NZR4 AL356867.1-201ENST00000429623 299 ntBASIC3.75□□□□□ -1.81
VSX1Q9NZR4 AC018644.1-201ENST00000429934 551 ntBASIC3.75□□□□□ -1.81
VSX1Q9NZR4 AC079799.1-201ENST00000430696 331 ntTSL 3 BASIC3.75□□□□□ -1.81
VSX1Q9NZR4 ATP6V0E1P2-201ENST00000441771 245 ntBASIC3.75□□□□□ -1.81
VSX1Q9NZR4 MTND4P19-201ENST00000446659 478 ntBASIC3.75□□□□□ -1.81
VSX1Q9NZR4 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC3.75□□□□□ -1.81
VSX1Q9NZR4 HMGN2P21-201ENST00000447764 270 ntBASIC3.75□□□□□ -1.81
VSX1Q9NZR4 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC3.75□□□□□ -1.81
VSX1Q9NZR4 RPS24P6-201ENST00000452670 400 ntBASIC3.75□□□□□ -1.81
VSX1Q9NZR4 LINC01210-201ENST00000465283 625 ntTSL 2 BASIC3.75□□□□□ -1.81
VSX1Q9NZR4 C10orf128-207ENST00000474718 614 ntAPPRIS P3 TSL 1 (best) BASIC3.75□□□□□ -1.81
VSX1Q9NZR4 RPS29P19-201ENST00000479709 171 ntBASIC3.75□□□□□ -1.81
VSX1Q9NZR4 AC012181.1-201ENST00000479895 423 ntBASIC3.75□□□□□ -1.81
VSX1Q9NZR4 RPS15AP34-201ENST00000487776 387 ntBASIC3.75□□□□□ -1.81
VSX1Q9NZR4 RPL7P47-201ENST00000497299 556 ntBASIC3.75□□□□□ -1.81
VSX1Q9NZR4 AC025554.1-201ENST00000505641 188 ntBASIC3.75□□□□□ -1.81
VSX1Q9NZR4 AC025475.1-201ENST00000512939 487 ntTSL 3 BASIC3.75□□□□□ -1.81
VSX1Q9NZR4 LIAS-206ENST00000513731 826 ntTSL 5 BASIC3.75□□□□□ -1.81
VSX1Q9NZR4 SNORA14.1-201ENST00000516113 141 ntBASIC3.75□□□□□ -1.81
VSX1Q9NZR4 SCARNA15.1-201ENST00000516384 125 ntBASIC3.75□□□□□ -1.81
VSX1Q9NZR4 Y_RNA.682-201ENST00000516457 100 ntBASIC3.75□□□□□ -1.81
VSX1Q9NZR4 SNORA31.20-201ENST00000517111 133 ntBASIC3.75□□□□□ -1.81
VSX1Q9NZR4 AC100801.1-202ENST00000518266 371 ntTSL 3 BASIC3.75□□□□□ -1.81
VSX1Q9NZR4 AC009435.1-201ENST00000519555 574 ntTSL 4 BASIC3.75□□□□□ -1.81
VSX1Q9NZR4 AC008489.1-201ENST00000524271 483 ntBASIC3.75□□□□□ -1.81
VSX1Q9NZR4 TRAV8-5-201ENST00000537369 341 ntBASIC3.75□□□□□ -1.81
VSX1Q9NZR4 PRH1-206ENST00000543626 710 ntAPPRIS P2 TSL 5 BASIC3.75□□□□□ -1.81
VSX1Q9NZR4 AC125603.1-201ENST00000552718 366 ntTSL 3 BASIC3.75□□□□□ -1.81
VSX1Q9NZR4 IMMP1LP2-201ENST00000552954 492 ntBASIC3.75□□□□□ -1.81
VSX1Q9NZR4 PSMA4-205ENST00000558281 773 ntTSL 3 BASIC3.75□□□□□ -1.81
VSX1Q9NZR4 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC3.75□□□□□ -1.81
VSX1Q9NZR4 MIR5583-1-201ENST00000580941 59 ntBASIC3.75□□□□□ -1.81
VSX1Q9NZR4 BNIP3P22-201ENST00000593399 556 ntBASIC3.75□□□□□ -1.81
VSX1Q9NZR4 SNRPGP15-201ENST00000600149 222 ntBASIC3.75□□□□□ -1.81
VSX1Q9NZR4 AC068790.4-201ENST00000602474 263 ntBASIC3.75□□□□□ -1.81
VSX1Q9NZR4 HMGN2P28-201ENST00000606102 262 ntBASIC3.75□□□□□ -1.81
VSX1Q9NZR4 AC022893.3-201ENST00000607665 437 ntBASIC3.75□□□□□ -1.81
VSX1Q9NZR4 AC107294.1-201ENST00000609524 467 ntBASIC3.75□□□□□ -1.81
VSX1Q9NZR4 RN7SL722P-201ENST00000617780 284 ntBASIC3.75□□□□□ -1.81
VSX1Q9NZR4 RN7SL565P-201ENST00000618246 284 ntBASIC3.75□□□□□ -1.81
VSX1Q9NZR4 Xist_exon1.1-201ENST00000618930 85 ntBASIC3.75□□□□□ -1.81
VSX1Q9NZR4 AC090971.5-201ENST00000621102 293 ntBASIC3.75□□□□□ -1.81
VSX1Q9NZR4 AC022418.1-201ENST00000624118 445 ntBASIC3.75□□□□□ -1.81
VSX1Q9NZR4 AC134503.1-201ENST00000633048 54 ntBASIC3.75□□□□□ -1.81
VSX1Q9NZR4 OR6P1-202ENST00000641540 3255 ntAPPRIS P1 BASIC3.75□□□□□ -1.81
VSX1Q9NZR4 Z82217.1-201ENST00000625157 8149 ntBASIC3.75□□□□□ -1.81
VSX1Q9NZR4 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
VSX1Q9NZR4 AC004160.1-212ENST00000421121 2078 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
VSX1Q9NZR4 BIRC3-206ENST00000532808 4238 ntAPPRIS P1 TSL 5 BASIC3.75□□□□□ -1.81
VSX1Q9NZR4 UTRN-204ENST00000367545 12339 ntAPPRIS P1 TSL 5 BASIC3.75□□□□□ -1.81
VSX1Q9NZR4 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC3.75□□□□□ -1.81
VSX1Q9NZR4 MIS12-201ENST00000381165 2505 ntAPPRIS P1 TSL 1 (best) BASIC3.75□□□□□ -1.81
VSX1Q9NZR4 CALCRL-203ENST00000410068 1984 ntAPPRIS P1 TSL 2 BASIC3.74□□□□□ -1.81
VSX1Q9NZR4 OTUD4P1-201ENST00000237841 3067 ntBASIC3.74□□□□□ -1.81
VSX1Q9NZR4 CNTN6-205ENST00000446702 4513 ntAPPRIS P1 TSL 1 (best) BASIC3.74□□□□□ -1.81
VSX1Q9NZR4 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC3.74□□□□□ -1.81
VSX1Q9NZR4 PTPN22-207ENST00000528414 3424 ntTSL 1 (best) BASIC3.74□□□□□ -1.81
VSX1Q9NZR4 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC3.74□□□□□ -1.81
VSX1Q9NZR4 RNA5-8SP7-201ENST00000363443 155 ntBASIC3.74□□□□□ -1.81
VSX1Q9NZR4 Y_RNA.259-201ENST00000364619 101 ntBASIC3.74□□□□□ -1.81
VSX1Q9NZR4 RNU6-715P-201ENST00000365204 103 ntBASIC3.74□□□□□ -1.81
VSX1Q9NZR4 BPY2-202ENST00000382585 321 ntAPPRIS P5 TSL 1 (best) BASIC3.74□□□□□ -1.81
VSX1Q9NZR4 SNORA56-201ENST00000383966 129 ntBASIC3.74□□□□□ -1.81
Retrieved 100 of 98,524 protein–RNA pairs in 88.2 ms