Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 LINC02033-202ENST00000623312 492 ntTSL 3 BASIC3.33□□□□□ -1.88
BRF2Q9HAW0 AL109837.2-201ENST00000632608 295 ntTSL 3 BASIC3.33□□□□□ -1.88
BRF2Q9HAW0 ADGRG4-203ENST00000394143 9931 ntAPPRIS P2 TSL 1 (best) BASIC3.33□□□□□ -1.88
BRF2Q9HAW0 AC032011.1-201ENST00000611703 1549 ntBASIC3.33□□□□□ -1.88
BRF2Q9HAW0 CNOT6L-201ENST00000504123 8843 ntAPPRIS P1 TSL 2 BASIC3.33□□□□□ -1.88
BRF2Q9HAW0 TPTE2-203ENST00000390680 1558 ntTSL 1 (best) BASIC3.33□□□□□ -1.88
BRF2Q9HAW0 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC3.33□□□□□ -1.88
BRF2Q9HAW0 HELZ-201ENST00000358691 13810 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
BRF2Q9HAW0 RNF17-201ENST00000255324 5119 ntAPPRIS P1 TSL 2 BASIC3.32□□□□□ -1.88
BRF2Q9HAW0 UBE2L2-201ENST00000254302 429 ntBASIC3.32□□□□□ -1.88
BRF2Q9HAW0 RN7SKP226-201ENST00000364912 300 ntBASIC3.32□□□□□ -1.88
BRF2Q9HAW0 RNU1-64P-201ENST00000365443 163 ntBASIC3.32□□□□□ -1.88
BRF2Q9HAW0 RNU6-108P-201ENST00000365558 107 ntBASIC3.32□□□□□ -1.88
BRF2Q9HAW0 RNU6ATAC16P-201ENST00000408591 138 ntBASIC3.32□□□□□ -1.88
BRF2Q9HAW0 RNU4-55P-201ENST00000410731 137 ntBASIC3.32□□□□□ -1.88
BRF2Q9HAW0 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
BRF2Q9HAW0 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC3.32□□□□□ -1.88
BRF2Q9HAW0 AL137856.1-202ENST00000418238 422 ntTSL 3 BASIC3.32□□□□□ -1.88
BRF2Q9HAW0 DBIP2-201ENST00000419076 262 ntBASIC3.32□□□□□ -1.88
BRF2Q9HAW0 ELOCP14-201ENST00000428070 331 ntBASIC3.32□□□□□ -1.88
BRF2Q9HAW0 MTCO2P11-201ENST00000431069 680 ntBASIC3.32□□□□□ -1.88
BRF2Q9HAW0 AC002486.1-201ENST00000435098 391 ntBASIC3.32□□□□□ -1.88
BRF2Q9HAW0 ELOCP7-201ENST00000439968 331 ntBASIC3.32□□□□□ -1.88
BRF2Q9HAW0 AC025428.1-201ENST00000444137 403 ntTSL 3 BASIC3.32□□□□□ -1.88
BRF2Q9HAW0 CENPBD1P1-201ENST00000464061 469 ntBASIC3.32□□□□□ -1.88
BRF2Q9HAW0 LINC01487-202ENST00000490497 423 ntTSL 3 BASIC3.32□□□□□ -1.88
BRF2Q9HAW0 AC116562.3-201ENST00000506136 177 ntBASIC3.32□□□□□ -1.88
BRF2Q9HAW0 MTND2P33-201ENST00000506452 1031 ntBASIC3.32□□□□□ -1.88
BRF2Q9HAW0 AC108078.1-201ENST00000508073 725 ntBASIC3.32□□□□□ -1.88
BRF2Q9HAW0 RNU6-143P-201ENST00000516942 93 ntBASIC3.32□□□□□ -1.88
BRF2Q9HAW0 AC107934.2-201ENST00000518653 310 ntBASIC3.32□□□□□ -1.88
BRF2Q9HAW0 AC068587.5-201ENST00000528506 175 ntBASIC3.32□□□□□ -1.88
BRF2Q9HAW0 AC022880.1-201ENST00000534017 973 ntBASIC3.32□□□□□ -1.88
BRF2Q9HAW0 AC009803.1-201ENST00000551531 416 ntTSL 3 BASIC3.32□□□□□ -1.88
BRF2Q9HAW0 AC006557.5-201ENST00000603126 811 ntBASIC3.32□□□□□ -1.88
BRF2Q9HAW0 AL158032.1-201ENST00000605401 106 ntBASIC3.32□□□□□ -1.88
BRF2Q9HAW0 AC008536.2-201ENST00000607284 349 ntBASIC3.32□□□□□ -1.88
BRF2Q9HAW0 AC099778.2-201ENST00000610904 211 ntBASIC3.32□□□□□ -1.88
BRF2Q9HAW0 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC3.32□□□□□ -1.88
BRF2Q9HAW0 C18orf54-202ENST00000382911 4056 ntTSL 5 BASIC3.32□□□□□ -1.88
BRF2Q9HAW0 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
BRF2Q9HAW0 VBP1-204ENST00000625964 1547 ntTSL 5 BASIC3.32□□□□□ -1.88
BRF2Q9HAW0 AC017071.1-201ENST00000564407 2204 ntBASIC3.32□□□□□ -1.88
BRF2Q9HAW0 PKHD1L1-201ENST00000378402 13076 ntAPPRIS P1 TSL 1 (best) BASIC3.32□□□□□ -1.88
BRF2Q9HAW0 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC3.32□□□□□ -1.88
BRF2Q9HAW0 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC3.31□□□□□ -1.88
BRF2Q9HAW0 MAPK10-362ENST00000641864 4484 ntBASIC3.31□□□□□ -1.88
BRF2Q9HAW0 AL356274.2-201ENST00000624379 3752 ntBASIC3.31□□□□□ -1.88
BRF2Q9HAW0 KCNH7-204ENST00000618399 3713 ntTSL 5 BASIC3.31□□□□□ -1.88
BRF2Q9HAW0 MACC1-205ENST00000589011 2686 ntAPPRIS P1 TSL 5 BASIC3.31□□□□□ -1.88
BRF2Q9HAW0 IL33-201ENST00000381434 2641 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
BRF2Q9HAW0 WRN-201ENST00000298139 5215 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
BRF2Q9HAW0 API5P2-201ENST00000397055 1498 ntBASIC3.31□□□□□ -1.88
BRF2Q9HAW0 MIR30E-201ENST00000362104 92 ntBASIC3.31□□□□□ -1.88
BRF2Q9HAW0 RNU6-179P-201ENST00000363350 107 ntBASIC3.31□□□□□ -1.88
BRF2Q9HAW0 RNA5SP139-201ENST00000364340 117 ntBASIC3.31□□□□□ -1.88
BRF2Q9HAW0 RNU6-198P-201ENST00000384258 104 ntBASIC3.31□□□□□ -1.88
BRF2Q9HAW0 RNA5SP252-201ENST00000391131 119 ntBASIC3.31□□□□□ -1.88
BRF2Q9HAW0 MIR888-201ENST00000401186 77 ntBASIC3.31□□□□□ -1.88
BRF2Q9HAW0 AL445189.1-201ENST00000405722 338 ntBASIC3.31□□□□□ -1.88
BRF2Q9HAW0 MIR1193-201ENST00000408109 78 ntBASIC3.31□□□□□ -1.88
BRF2Q9HAW0 CYCSP19-201ENST00000411715 316 ntBASIC3.31□□□□□ -1.88
BRF2Q9HAW0 AC017079.2-201ENST00000416102 485 ntBASIC3.31□□□□□ -1.88
BRF2Q9HAW0 LINC01351-201ENST00000424735 526 ntTSL 2 BASIC3.31□□□□□ -1.88
BRF2Q9HAW0 DPPA2P1-201ENST00000428060 556 ntBASIC3.31□□□□□ -1.88
BRF2Q9HAW0 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC3.31□□□□□ -1.88
BRF2Q9HAW0 RPL21P40-201ENST00000428586 483 ntBASIC3.31□□□□□ -1.88
BRF2Q9HAW0 GPM6BP2-201ENST00000432046 144 ntBASIC3.31□□□□□ -1.88
BRF2Q9HAW0 AC007389.2-201ENST00000434630 306 ntBASIC3.31□□□□□ -1.88
BRF2Q9HAW0 MTND1P34-201ENST00000438556 671 ntBASIC3.31□□□□□ -1.88
BRF2Q9HAW0 AL592182.1-201ENST00000440897 250 ntTSL 5 BASIC3.31□□□□□ -1.88
BRF2Q9HAW0 GPM6BP1-201ENST00000446387 144 ntBASIC3.31□□□□□ -1.88
BRF2Q9HAW0 AC074327.1-201ENST00000448017 540 ntTSL 2 BASIC3.31□□□□□ -1.88
BRF2Q9HAW0 AC132479.1-201ENST00000449160 144 ntBASIC3.31□□□□□ -1.88
BRF2Q9HAW0 AC068580.2-201ENST00000449749 338 ntTSL 5 BASIC3.31□□□□□ -1.88
BRF2Q9HAW0 AC006539.3-201ENST00000454258 129 ntBASIC3.31□□□□□ -1.88
BRF2Q9HAW0 MTCYBP1-201ENST00000454315 1119 ntBASIC3.31□□□□□ -1.88
BRF2Q9HAW0 AC010401.1-201ENST00000463867 348 ntBASIC3.31□□□□□ -1.88
BRF2Q9HAW0 RPL23AP14-201ENST00000468281 468 ntBASIC3.31□□□□□ -1.88
BRF2Q9HAW0 AP002884.2-201ENST00000471647 395 ntBASIC3.31□□□□□ -1.88
BRF2Q9HAW0 AC011825.1-201ENST00000484967 388 ntBASIC3.31□□□□□ -1.88
BRF2Q9HAW0 HMGB1P29-201ENST00000505659 499 ntBASIC3.31□□□□□ -1.88
BRF2Q9HAW0 AC005920.2-201ENST00000509833 332 ntTSL 3 BASIC3.31□□□□□ -1.88
BRF2Q9HAW0 APOOP4-201ENST00000513530 597 ntBASIC3.31□□□□□ -1.88
BRF2Q9HAW0 RNU1-95P-201ENST00000516357 160 ntBASIC3.31□□□□□ -1.88
BRF2Q9HAW0 RNU1-128P-201ENST00000516704 160 ntBASIC3.31□□□□□ -1.88
BRF2Q9HAW0 HDAC2-AS2-206ENST00000517965 850 ntTSL 3 BASIC3.31□□□□□ -1.88
BRF2Q9HAW0 AC093331.1-201ENST00000521474 169 ntBASIC3.31□□□□□ -1.88
BRF2Q9HAW0 IGHV3-76-201ENST00000522465 295 ntBASIC3.31□□□□□ -1.88
BRF2Q9HAW0 AC103843.2-201ENST00000530523 682 ntBASIC3.31□□□□□ -1.88
BRF2Q9HAW0 AP000786.1-201ENST00000541092 581 ntTSL 4 BASIC3.31□□□□□ -1.88
BRF2Q9HAW0 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC3.31□□□□□ -1.88
BRF2Q9HAW0 AC008114.1-201ENST00000544122 427 ntTSL 2 BASIC3.31□□□□□ -1.88
BRF2Q9HAW0 NDUFB1-204ENST00000555441 458 ntAPPRIS P1 TSL 3 BASIC3.31□□□□□ -1.88
BRF2Q9HAW0 AC010546.1-201ENST00000569391 485 ntBASIC3.31□□□□□ -1.88
BRF2Q9HAW0 AL121992.2-201ENST00000606262 256 ntBASIC3.31□□□□□ -1.88
BRF2Q9HAW0 FTX_3.1-201ENST00000610451 147 ntBASIC3.31□□□□□ -1.88
BRF2Q9HAW0 AC087241.4-201ENST00000612441 480 ntBASIC3.31□□□□□ -1.88
BRF2Q9HAW0 AL121772.2-201ENST00000614331 297 ntBASIC3.31□□□□□ -1.88
BRF2Q9HAW0 HOTTIP_4.1-201ENST00000618195 165 ntBASIC3.31□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 106.1 ms