Protein–RNA interactions for Protein: Q9H3E2

SNX25, Sorting nexin-25, humanhuman

Predictions only

Length 840 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX25Q9H3E2 AC100870.1-201ENST00000522035 505 ntBASIC3.06□□□□□ -1.92
SNX25Q9H3E2 AP002748.2-201ENST00000528671 348 ntBASIC3.06□□□□□ -1.92
SNX25Q9H3E2 CDC27-207ENST00000531206 3177 ntAPPRIS ALT1 TSL 1 (best) BASIC3.06□□□□□ -1.92
SNX25Q9H3E2 AC063948.1-201ENST00000547360 379 ntTSL 5 BASIC3.06□□□□□ -1.92
SNX25Q9H3E2 AC106782.4-201ENST00000568264 210 ntBASIC3.06□□□□□ -1.92
SNX25Q9H3E2 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC3.06□□□□□ -1.92
SNX25Q9H3E2 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC3.06□□□□□ -1.92
SNX25Q9H3E2 MIR548AB-201ENST00000584917 84 ntBASIC3.06□□□□□ -1.92
SNX25Q9H3E2 CLIC4P2-201ENST00000601934 717 ntBASIC3.06□□□□□ -1.92
SNX25Q9H3E2 KC877982.1-201ENST00000602313 470 ntBASIC3.06□□□□□ -1.92
SNX25Q9H3E2 AF131215.7-201ENST00000602443 707 ntBASIC3.06□□□□□ -1.92
SNX25Q9H3E2 Z99497.2-201ENST00000603634 310 ntBASIC3.06□□□□□ -1.92
SNX25Q9H3E2 AC068057.2-201ENST00000624047 895 ntBASIC3.06□□□□□ -1.92
SNX25Q9H3E2 SENP7-204ENST00000394085 1483 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
SNX25Q9H3E2 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC3.05□□□□□ -1.92
SNX25Q9H3E2 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC3.05□□□□□ -1.92
SNX25Q9H3E2 RNY3P9-201ENST00000384727 106 ntBASIC3.05□□□□□ -1.92
SNX25Q9H3E2 U3.26-201ENST00000391236 204 ntBASIC3.05□□□□□ -1.92
SNX25Q9H3E2 RPL17P50-201ENST00000396131 546 ntBASIC3.05□□□□□ -1.92
SNX25Q9H3E2 MIR887-201ENST00000401258 79 ntBASIC3.05□□□□□ -1.92
SNX25Q9H3E2 HIST1H2APS3-201ENST00000403259 134 ntBASIC3.05□□□□□ -1.92
SNX25Q9H3E2 RPL17P12-201ENST00000413391 526 ntBASIC3.05□□□□□ -1.92
SNX25Q9H3E2 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC3.05□□□□□ -1.92
SNX25Q9H3E2 AL590705.3-201ENST00000416066 474 ntTSL 1 (best) BASIC3.05□□□□□ -1.92
SNX25Q9H3E2 LINC01359-202ENST00000436350 710 ntTSL 3 BASIC3.05□□□□□ -1.92
SNX25Q9H3E2 AC107083.1-201ENST00000439643 279 ntBASIC3.05□□□□□ -1.92
SNX25Q9H3E2 AL589684.1-201ENST00000445974 507 ntTSL 3 BASIC3.05□□□□□ -1.92
SNX25Q9H3E2 AC114485.1-201ENST00000447916 657 ntTSL 3 BASIC3.05□□□□□ -1.92
SNX25Q9H3E2 AC092422.1-201ENST00000455576 584 ntTSL 4 BASIC3.05□□□□□ -1.92
SNX25Q9H3E2 RPL21P41-201ENST00000459863 264 ntBASIC3.05□□□□□ -1.92
SNX25Q9H3E2 NDUFA6-201ENST00000470753 475 ntTSL 2 BASIC3.05□□□□□ -1.92
SNX25Q9H3E2 RN7SL499P-201ENST00000481141 276 ntBASIC3.05□□□□□ -1.92
SNX25Q9H3E2 LARP1BP2-201ENST00000486594 519 ntBASIC3.05□□□□□ -1.92
SNX25Q9H3E2 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC3.05□□□□□ -1.92
SNX25Q9H3E2 FABP5P5-201ENST00000515537 406 ntBASIC3.05□□□□□ -1.92
SNX25Q9H3E2 AC106895.1-201ENST00000515825 548 ntTSL 4 BASIC3.05□□□□□ -1.92
SNX25Q9H3E2 SNORA31.1-201ENST00000515993 133 ntBASIC3.05□□□□□ -1.92
SNX25Q9H3E2 SNORA31.5-201ENST00000516190 133 ntBASIC3.05□□□□□ -1.92
SNX25Q9H3E2 RNA5SP367-201ENST00000516557 118 ntBASIC3.05□□□□□ -1.92
SNX25Q9H3E2 AP003122.4-201ENST00000530980 758 ntBASIC3.05□□□□□ -1.92
SNX25Q9H3E2 AC007115.1-201ENST00000546853 234 ntBASIC3.05□□□□□ -1.92
SNX25Q9H3E2 AC012414.6-201ENST00000568241 401 ntBASIC3.05□□□□□ -1.92
SNX25Q9H3E2 AC099566.1-211ENST00000595188 737 ntTSL 5 BASIC3.05□□□□□ -1.92
SNX25Q9H3E2 AC024153.1-201ENST00000603103 365 ntBASIC3.05□□□□□ -1.92
SNX25Q9H3E2 AP001981.2-201ENST00000603241 418 ntBASIC3.05□□□□□ -1.92
SNX25Q9H3E2 BX664608.1-201ENST00000610519 487 ntBASIC3.05□□□□□ -1.92
SNX25Q9H3E2 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC3.05□□□□□ -1.92
SNX25Q9H3E2 AC009878.1-201ENST00000621819 340 ntBASIC3.05□□□□□ -1.92
SNX25Q9H3E2 AC091953.2-201ENST00000623979 160 ntBASIC3.05□□□□□ -1.92
SNX25Q9H3E2 AC099654.13-201ENST00000639774 207 ntBASIC3.05□□□□□ -1.92
SNX25Q9H3E2 TFEC-202ENST00000320239 6605 ntAPPRIS P1 TSL 1 (best) BASIC3.05□□□□□ -1.92
SNX25Q9H3E2 CRISP3-204ENST00000433368 2205 ntAPPRIS ALT2 TSL 5 BASIC3.04□□□□□ -1.92
SNX25Q9H3E2 LINC00587-201ENST00000374801 590 ntTSL 1 (best) BASIC3.04□□□□□ -1.92
SNX25Q9H3E2 AL359634.1-202ENST00000404721 284 ntBASIC3.04□□□□□ -1.92
SNX25Q9H3E2 RBM6-203ENST00000421682 684 ntTSL 2 BASIC3.04□□□□□ -1.92
SNX25Q9H3E2 AC013401.1-202ENST00000422017 626 ntTSL 2 BASIC3.04□□□□□ -1.92
SNX25Q9H3E2 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC3.04□□□□□ -1.92
SNX25Q9H3E2 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC3.04□□□□□ -1.92
SNX25Q9H3E2 USP12PX-201ENST00000432383 1057 ntBASIC3.04□□□□□ -1.92
SNX25Q9H3E2 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC3.04□□□□□ -1.92
SNX25Q9H3E2 AC093156.1-201ENST00000440382 670 ntBASIC3.04□□□□□ -1.92
SNX25Q9H3E2 AL135938.1-201ENST00000443141 297 ntBASIC3.04□□□□□ -1.92
SNX25Q9H3E2 COX6CP2-201ENST00000444980 225 ntBASIC3.04□□□□□ -1.92
SNX25Q9H3E2 CBWD4P-201ENST00000445695 655 ntBASIC3.04□□□□□ -1.92
SNX25Q9H3E2 AC020550.1-201ENST00000447385 163 ntBASIC3.04□□□□□ -1.92
SNX25Q9H3E2 RPL30P14-201ENST00000482744 348 ntBASIC3.04□□□□□ -1.92
SNX25Q9H3E2 HIGD1AP13-201ENST00000509878 289 ntBASIC3.04□□□□□ -1.92
SNX25Q9H3E2 AC006445.2-201ENST00000510061 472 ntBASIC3.04□□□□□ -1.92
SNX25Q9H3E2 AC010486.3-201ENST00000511602 785 ntBASIC3.04□□□□□ -1.92
SNX25Q9H3E2 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC3.04□□□□□ -1.92
SNX25Q9H3E2 RNU6-390P-201ENST00000516259 103 ntBASIC3.04□□□□□ -1.92
SNX25Q9H3E2 AC103957.1-202ENST00000519814 735 ntTSL 3 BASIC3.04□□□□□ -1.92
SNX25Q9H3E2 AP003181.2-201ENST00000528941 181 ntBASIC3.04□□□□□ -1.92
SNX25Q9H3E2 AC022878.1-201ENST00000530684 149 ntBASIC3.04□□□□□ -1.92
SNX25Q9H3E2 LINC02384-208ENST00000546086 565 ntTSL 3 BASIC3.04□□□□□ -1.92
SNX25Q9H3E2 ACTR3BP3-201ENST00000565577 979 ntBASIC3.04□□□□□ -1.92
SNX25Q9H3E2 RPL23AP84-201ENST00000571193 464 ntBASIC3.04□□□□□ -1.92
SNX25Q9H3E2 LINC00907-210ENST00000593316 847 ntTSL 3 BASIC3.04□□□□□ -1.92
SNX25Q9H3E2 MIR7106-201ENST00000612419 65 ntBASIC3.04□□□□□ -1.92
SNX25Q9H3E2 AL138880.2-201ENST00000616214 239 ntBASIC3.04□□□□□ -1.92
SNX25Q9H3E2 uc_338.12-201ENST00000616344 181 ntBASIC3.04□□□□□ -1.92
SNX25Q9H3E2 SNHG22-203ENST00000617833 660 ntBASIC3.04□□□□□ -1.92
SNX25Q9H3E2 AC090617.7-201ENST00000623952 126 ntBASIC3.04□□□□□ -1.92
SNX25Q9H3E2 MIR3974-201ENST00000637126 96 ntBASIC3.04□□□□□ -1.92
SNX25Q9H3E2 AC010149.2-201ENST00000637608 315 ntBASIC3.04□□□□□ -1.92
SNX25Q9H3E2 N4BP2L2-211ENST00000504114 2513 ntTSL 5 BASIC3.04□□□□□ -1.92
SNX25Q9H3E2 SYTL2-230ENST00000634661 6672 ntTSL 5 BASIC3.03□□□□□ -1.92
SNX25Q9H3E2 METTL18-201ENST00000303469 1426 ntAPPRIS P1 TSL 1 (best) BASIC3.03□□□□□ -1.92
SNX25Q9H3E2 MINPP1-204ENST00000536010 2215 ntTSL 1 (best) BASIC3.03□□□□□ -1.92
SNX25Q9H3E2 FOXP2-210ENST00000403559 6415 ntTSL 2 BASIC3.03□□□□□ -1.92
SNX25Q9H3E2 RNU1-35P-201ENST00000362782 153 ntBASIC3.03□□□□□ -1.92
SNX25Q9H3E2 RNU6-270P-201ENST00000364131 105 ntBASIC3.03□□□□□ -1.92
SNX25Q9H3E2 SNORA18.3-201ENST00000384122 132 ntBASIC3.03□□□□□ -1.92
SNX25Q9H3E2 MIR512-1-201ENST00000384913 84 ntBASIC3.03□□□□□ -1.92
SNX25Q9H3E2 MIR325-201ENST00000385260 98 ntBASIC3.03□□□□□ -1.92
SNX25Q9H3E2 RNU6-278P-201ENST00000390945 109 ntBASIC3.03□□□□□ -1.92
SNX25Q9H3E2 AL513331.1-201ENST00000411908 397 ntBASIC3.03□□□□□ -1.92
SNX25Q9H3E2 AL645937.1-202ENST00000421799 937 ntBASIC3.03□□□□□ -1.92
SNX25Q9H3E2 RPS24P13-201ENST00000442520 397 ntBASIC3.03□□□□□ -1.92
SNX25Q9H3E2 TAF9P1-201ENST00000445421 515 ntBASIC3.03□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 188.9 ms