Protein–RNA interactions for Protein: Q9H0I3

CCDC113, Coiled-coil domain-containing protein 113, humanhuman

Predictions only

Length 377 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC113Q9H0I3 RNA5SP130-201ENST00000364431 114 ntBASIC4.56□□□□□ -1.68
CCDC113Q9H0I3 AL139397.2-201ENST00000404529 772 ntBASIC4.56□□□□□ -1.68
CCDC113Q9H0I3 AC112721.2-201ENST00000409910 541 ntTSL 4 BASIC4.56□□□□□ -1.68
CCDC113Q9H0I3 RNA5SP104-201ENST00000410989 118 ntBASIC4.56□□□□□ -1.68
CCDC113Q9H0I3 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC4.56□□□□□ -1.68
CCDC113Q9H0I3 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC4.56□□□□□ -1.68
CCDC113Q9H0I3 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC4.56□□□□□ -1.68
CCDC113Q9H0I3 ACTR3BP6-201ENST00000422332 1241 ntBASIC4.56□□□□□ -1.68
CCDC113Q9H0I3 HSPD1P21-201ENST00000436541 245 ntBASIC4.56□□□□□ -1.68
CCDC113Q9H0I3 AC008264.1-201ENST00000447612 367 ntBASIC4.56□□□□□ -1.68
CCDC113Q9H0I3 AL356859.1-201ENST00000449180 414 ntTSL 5 BASIC4.56□□□□□ -1.68
CCDC113Q9H0I3 RPL21P41-201ENST00000459863 264 ntBASIC4.56□□□□□ -1.68
CCDC113Q9H0I3 RPL21P93-201ENST00000480465 489 ntBASIC4.56□□□□□ -1.68
CCDC113Q9H0I3 RN7SL604P-201ENST00000492589 296 ntBASIC4.56□□□□□ -1.68
CCDC113Q9H0I3 FGF7P4-201ENST00000509595 295 ntBASIC4.56□□□□□ -1.68
CCDC113Q9H0I3 AC006499.6-201ENST00000511169 607 ntBASIC4.56□□□□□ -1.68
CCDC113Q9H0I3 TBCAP3-201ENST00000512475 312 ntBASIC4.56□□□□□ -1.68
CCDC113Q9H0I3 AC079160.1-201ENST00000513489 739 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
CCDC113Q9H0I3 RNA5SP471-201ENST00000516971 106 ntBASIC4.56□□□□□ -1.68
CCDC113Q9H0I3 ARL6IP1P1-201ENST00000545836 610 ntBASIC4.56□□□□□ -1.68
CCDC113Q9H0I3 GLYCAM1-201ENST00000546596 285 ntBASIC4.56□□□□□ -1.68
CCDC113Q9H0I3 MIR4795-201ENST00000584182 89 ntBASIC4.56□□□□□ -1.68
CCDC113Q9H0I3 AC015911.9-201ENST00000591634 185 ntTSL 5 BASIC4.56□□□□□ -1.68
CCDC113Q9H0I3 BNIP3P25-201ENST00000596023 559 ntBASIC4.56□□□□□ -1.68
CCDC113Q9H0I3 ATP1B3P1-201ENST00000605365 821 ntBASIC4.56□□□□□ -1.68
CCDC113Q9H0I3 MACROD2-IT1-202ENST00000605675 575 ntTSL 5 BASIC4.56□□□□□ -1.68
CCDC113Q9H0I3 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC4.56□□□□□ -1.68
CCDC113Q9H0I3 AL132765.2-201ENST00000610812 351 ntBASIC4.56□□□□□ -1.68
CCDC113Q9H0I3 DUSP12P1-201ENST00000612874 516 ntBASIC4.56□□□□□ -1.68
CCDC113Q9H0I3 AC103705.1-201ENST00000619013 241 ntBASIC4.56□□□□□ -1.68
CCDC113Q9H0I3 C4orf22-209ENST00000621014 228 ntTSL 3 BASIC4.56□□□□□ -1.68
CCDC113Q9H0I3 FAM111B-202ENST00000411426 3344 ntTSL 4 BASIC4.56□□□□□ -1.68
CCDC113Q9H0I3 LINC01733-201ENST00000449316 4604 ntTSL 1 (best) BASIC4.56□□□□□ -1.68
CCDC113Q9H0I3 BAZ2B-204ENST00000392783 8289 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
CCDC113Q9H0I3 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC4.55□□□□□ -1.68
CCDC113Q9H0I3 OR10D3-203ENST00000641546 3566 ntAPPRIS P1 BASIC4.55□□□□□ -1.68
CCDC113Q9H0I3 SLC38A9-201ENST00000318672 2369 ntAPPRIS P1 TSL 2 BASIC4.55□□□□□ -1.68
CCDC113Q9H0I3 PPIP5K2-201ENST00000321521 15407 ntAPPRIS P3 TSL 5 BASIC4.55□□□□□ -1.68
CCDC113Q9H0I3 RNU6-1252P-201ENST00000363054 104 ntBASIC4.55□□□□□ -1.68
CCDC113Q9H0I3 SNORD74.4-201ENST00000364129 80 ntBASIC4.55□□□□□ -1.68
CCDC113Q9H0I3 Y_RNA.245-201ENST00000364493 95 ntBASIC4.55□□□□□ -1.68
CCDC113Q9H0I3 U3.12-201ENST00000364498 214 ntBASIC4.55□□□□□ -1.68
CCDC113Q9H0I3 Y_RNA.399-201ENST00000383955 105 ntBASIC4.55□□□□□ -1.68
CCDC113Q9H0I3 MIR93-201ENST00000385024 80 ntBASIC4.55□□□□□ -1.68
CCDC113Q9H0I3 SNORA16.2-201ENST00000390991 127 ntBASIC4.55□□□□□ -1.68
CCDC113Q9H0I3 AL356967.1-201ENST00000406305 431 ntBASIC4.55□□□□□ -1.68
CCDC113Q9H0I3 AC063979.1-201ENST00000415539 377 ntBASIC4.55□□□□□ -1.68
CCDC113Q9H0I3 RPL21P90-201ENST00000415692 466 ntBASIC4.55□□□□□ -1.68
CCDC113Q9H0I3 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC4.55□□□□□ -1.68
CCDC113Q9H0I3 AC105399.1-201ENST00000422418 418 ntTSL 2 BASIC4.55□□□□□ -1.68
CCDC113Q9H0I3 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC4.55□□□□□ -1.68
CCDC113Q9H0I3 AL033504.1-204ENST00000434985 413 ntTSL 2 BASIC4.55□□□□□ -1.68
CCDC113Q9H0I3 AC023669.2-201ENST00000436266 239 ntTSL 3 BASIC4.55□□□□□ -1.68
CCDC113Q9H0I3 HMGB1P18-201ENST00000438801 619 ntBASIC4.55□□□□□ -1.68
CCDC113Q9H0I3 AC093579.1-201ENST00000439455 352 ntTSL 2 BASIC4.55□□□□□ -1.68
CCDC113Q9H0I3 HMGB3P11-201ENST00000440127 604 ntBASIC4.55□□□□□ -1.68
CCDC113Q9H0I3 AC006011.1-201ENST00000442758 349 ntBASIC4.55□□□□□ -1.68
CCDC113Q9H0I3 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC4.55□□□□□ -1.68
CCDC113Q9H0I3 AL121760.1-201ENST00000447206 346 ntTSL 2 BASIC4.55□□□□□ -1.68
CCDC113Q9H0I3 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC4.55□□□□□ -1.68
CCDC113Q9H0I3 AMD1P1-201ENST00000457220 922 ntBASIC4.55□□□□□ -1.68
CCDC113Q9H0I3 RNU7-167P-201ENST00000459160 62 ntBASIC4.55□□□□□ -1.68
CCDC113Q9H0I3 OARD1-209ENST00000471367 401 ntTSL 2 BASIC4.55□□□□□ -1.68
CCDC113Q9H0I3 VN1R17P-201ENST00000472048 1090 ntBASIC4.55□□□□□ -1.68
CCDC113Q9H0I3 LINC02491-201ENST00000504710 403 ntTSL 2 BASIC4.55□□□□□ -1.68
CCDC113Q9H0I3 AC092440.1-201ENST00000512563 571 ntTSL 4 BASIC4.55□□□□□ -1.68
CCDC113Q9H0I3 LINC00491-204ENST00000513815 582 ntTSL 4 BASIC4.55□□□□□ -1.68
CCDC113Q9H0I3 AC126768.3-201ENST00000514519 560 ntTSL 4 BASIC4.55□□□□□ -1.68
CCDC113Q9H0I3 AC106744.2-202ENST00000515123 448 ntTSL 3 BASIC4.55□□□□□ -1.68
CCDC113Q9H0I3 RNU2-69P-201ENST00000516061 100 ntBASIC4.55□□□□□ -1.68
CCDC113Q9H0I3 RNU6-273P-201ENST00000516937 96 ntBASIC4.55□□□□□ -1.68
CCDC113Q9H0I3 RNA5SP290-201ENST00000517133 127 ntBASIC4.55□□□□□ -1.68
CCDC113Q9H0I3 AC004024.1-201ENST00000549244 247 ntBASIC4.55□□□□□ -1.68
CCDC113Q9H0I3 MIR3690-201ENST00000580266 75 ntBASIC4.55□□□□□ -1.68
CCDC113Q9H0I3 MIR4719-201ENST00000585233 84 ntBASIC4.55□□□□□ -1.68
CCDC113Q9H0I3 AC064801.1-201ENST00000612025 407 ntBASIC4.55□□□□□ -1.68
CCDC113Q9H0I3 uc_338.32-201ENST00000615087 172 ntBASIC4.55□□□□□ -1.68
CCDC113Q9H0I3 ENOX2-202ENST00000370927 3788 ntTSL 1 (best) BASIC4.55□□□□□ -1.68
CCDC113Q9H0I3 DNAJC10-201ENST00000264065 20129 ntAPPRIS P1 TSL 1 (best) BASIC4.55□□□□□ -1.68
CCDC113Q9H0I3 ZNF285B-201ENST00000561698 1767 ntBASIC4.55□□□□□ -1.68
CCDC113Q9H0I3 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC4.55□□□□□ -1.68
CCDC113Q9H0I3 LINC02458-201ENST00000500381 2941 ntTSL 2 BASIC4.55□□□□□ -1.68
CCDC113Q9H0I3 GPBP1-204ENST00000506184 2857 ntAPPRIS P3 TSL 1 (best) BASIC4.55□□□□□ -1.68
CCDC113Q9H0I3 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC4.54□□□□□ -1.68
CCDC113Q9H0I3 ADAM29-201ENST00000359240 3325 ntAPPRIS P1 TSL 2 BASIC4.54□□□□□ -1.68
CCDC113Q9H0I3 MARK2P15-201ENST00000432204 2186 ntBASIC4.54□□□□□ -1.68
CCDC113Q9H0I3 MTTP-201ENST00000265517 4037 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
CCDC113Q9H0I3 MGA-207ENST00000566586 14439 ntAPPRIS ALT2 TSL 1 (best) BASIC4.54□□□□□ -1.68
CCDC113Q9H0I3 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC4.54□□□□□ -1.68
CCDC113Q9H0I3 OR10A7-201ENST00000326258 951 ntAPPRIS P1 BASIC4.54□□□□□ -1.68
CCDC113Q9H0I3 MIR372-201ENST00000362225 67 ntBASIC4.54□□□□□ -1.68
CCDC113Q9H0I3 RN7SKP227-201ENST00000364445 330 ntBASIC4.54□□□□□ -1.68
CCDC113Q9H0I3 SNORA4.3-201ENST00000365564 137 ntBASIC4.54□□□□□ -1.68
CCDC113Q9H0I3 LZIC-201ENST00000377213 945 ntAPPRIS P1 TSL 1 (best) BASIC4.54□□□□□ -1.68
CCDC113Q9H0I3 RNU6-45P-201ENST00000384471 107 ntBASIC4.54□□□□□ -1.68
CCDC113Q9H0I3 RPL7P10-201ENST00000417407 739 ntBASIC4.54□□□□□ -1.68
CCDC113Q9H0I3 GPM6BP2-201ENST00000432046 144 ntBASIC4.54□□□□□ -1.68
CCDC113Q9H0I3 PLCE1-AS2-203ENST00000433038 396 ntTSL 2 BASIC4.54□□□□□ -1.68
CCDC113Q9H0I3 LINC01423-202ENST00000436845 423 ntTSL 2 BASIC4.54□□□□□ -1.68
CCDC113Q9H0I3 AC009237.8-201ENST00000445492 379 ntBASIC4.54□□□□□ -1.68
Retrieved 100 of 98,524 protein–RNA pairs in 104.1 ms