Protein–RNA interactions for Protein: Q96M95

CCDC42, Coiled-coil domain-containing protein 42, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC42Q96M95 HTN3-201ENST00000381057 493 ntAPPRIS ALT2 TSL 2 BASIC1.84□□□□□ -2.11
CCDC42Q96M95 SNORD65C-201ENST00000390962 71 ntBASIC1.84□□□□□ -2.11
CCDC42Q96M95 OFD1P2Y-201ENST00000421895 1149 ntBASIC1.84□□□□□ -2.11
CCDC42Q96M95 AC003685.2-201ENST00000422795 395 ntBASIC1.84□□□□□ -2.11
CCDC42Q96M95 RAC1P8-201ENST00000427086 527 ntBASIC1.84□□□□□ -2.11
CCDC42Q96M95 AC093106.2-201ENST00000428212 385 ntBASIC1.84□□□□□ -2.11
CCDC42Q96M95 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC1.84□□□□□ -2.11
CCDC42Q96M95 MTND2P24-201ENST00000453434 806 ntBASIC1.84□□□□□ -2.11
CCDC42Q96M95 AC080013.2-201ENST00000460866 323 ntBASIC1.84□□□□□ -2.11
CCDC42Q96M95 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC1.84□□□□□ -2.11
CCDC42Q96M95 AC020699.1-201ENST00000505161 445 ntBASIC1.84□□□□□ -2.11
CCDC42Q96M95 LINC02377-202ENST00000505436 523 ntTSL 5 BASIC1.84□□□□□ -2.11
CCDC42Q96M95 LINC01846-201ENST00000505908 651 ntTSL 5 BASIC1.84□□□□□ -2.11
CCDC42Q96M95 AC112518.2-201ENST00000508565 425 ntBASIC1.84□□□□□ -2.11
CCDC42Q96M95 AC063919.1-201ENST00000514281 254 ntTSL 3 BASIC1.84□□□□□ -2.11
CCDC42Q96M95 RNA5SP182-201ENST00000516064 82 ntBASIC1.84□□□□□ -2.11
CCDC42Q96M95 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC1.84□□□□□ -2.11
CCDC42Q96M95 AC090502.2-201ENST00000549267 280 ntBASIC1.84□□□□□ -2.11
CCDC42Q96M95 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC1.84□□□□□ -2.11
CCDC42Q96M95 AL132857.1-201ENST00000555180 708 ntBASIC1.84□□□□□ -2.11
CCDC42Q96M95 BLOC1S6-206ENST00000564765 706 ntTSL 4 BASIC1.84□□□□□ -2.11
CCDC42Q96M95 AC133065.1-201ENST00000572017 575 ntTSL 3 BASIC1.84□□□□□ -2.11
CCDC42Q96M95 AC016382.1-201ENST00000583580 387 ntTSL 3 BASIC1.84□□□□□ -2.11
CCDC42Q96M95 AC010928.2-201ENST00000588017 287 ntBASIC1.84□□□□□ -2.11
CCDC42Q96M95 AC007229.1-201ENST00000590455 412 ntBASIC1.84□□□□□ -2.11
CCDC42Q96M95 AP000403.1-201ENST00000603349 851 ntBASIC1.84□□□□□ -2.11
CCDC42Q96M95 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC1.84□□□□□ -2.11
CCDC42Q96M95 MTND4LP5-201ENST00000605152 292 ntBASIC1.84□□□□□ -2.11
CCDC42Q96M95 AC004067.1-201ENST00000608733 700 ntBASIC1.84□□□□□ -2.11
CCDC42Q96M95 AC005296.1-201ENST00000616145 209 ntBASIC1.84□□□□□ -2.11
CCDC42Q96M95 AP003400.5-201ENST00000624827 617 ntBASIC1.84□□□□□ -2.11
CCDC42Q96M95 AC080188.3-201ENST00000624842 748 ntBASIC1.84□□□□□ -2.11
CCDC42Q96M95 AC025048.6-202ENST00000627667 438 ntBASIC1.84□□□□□ -2.11
CCDC42Q96M95 MUC15-203ENST00000455601 3156 ntAPPRIS P1 TSL 2 BASIC1.84□□□□□ -2.12
CCDC42Q96M95 ASB17-201ENST00000284142 1107 ntAPPRIS P1 TSL 1 (best) BASIC1.83□□□□□ -2.12
CCDC42Q96M95 U8.14-201ENST00000390843 143 ntBASIC1.83□□□□□ -2.12
CCDC42Q96M95 RN7SKP192-201ENST00000411291 327 ntBASIC1.83□□□□□ -2.12
CCDC42Q96M95 RPS20P15-201ENST00000412792 311 ntBASIC1.83□□□□□ -2.12
CCDC42Q96M95 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC1.83□□□□□ -2.12
CCDC42Q96M95 VN1R42P-201ENST00000424651 344 ntBASIC1.83□□□□□ -2.12
CCDC42Q96M95 ZNF863P-201ENST00000426746 417 ntBASIC1.83□□□□□ -2.12
CCDC42Q96M95 AC092155.1-201ENST00000444672 573 ntTSL 4 BASIC1.83□□□□□ -2.12
CCDC42Q96M95 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC1.83□□□□□ -2.12
CCDC42Q96M95 PMCHL2-203ENST00000457791 237 ntBASIC1.83□□□□□ -2.12
CCDC42Q96M95 ZBTB20-AS2-201ENST00000478301 372 ntTSL 2 BASIC1.83□□□□□ -2.12
CCDC42Q96M95 ANXA2P1-201ENST00000505539 926 ntBASIC1.83□□□□□ -2.12
CCDC42Q96M95 AC010226.1-203ENST00000515570 765 ntTSL 2 BASIC1.83□□□□□ -2.12
CCDC42Q96M95 AC110296.1-201ENST00000515680 341 ntTSL 3 BASIC1.83□□□□□ -2.12
CCDC42Q96M95 MIR892C-201ENST00000516410 77 ntBASIC1.83□□□□□ -2.12
CCDC42Q96M95 MIR100HG-213ENST00000531470 560 ntTSL 4 BASIC1.83□□□□□ -2.12
CCDC42Q96M95 AL133241.1-201ENST00000556832 487 ntBASIC1.83□□□□□ -2.12
CCDC42Q96M95 PWRN1-209ENST00000568019 359 ntTSL 3 BASIC1.83□□□□□ -2.12
CCDC42Q96M95 AC007906.1-201ENST00000568648 510 ntTSL 5 BASIC1.83□□□□□ -2.12
CCDC42Q96M95 MIR4648-201ENST00000580107 72 ntBASIC1.83□□□□□ -2.12
CCDC42Q96M95 LINC01470-205ENST00000584829 681 ntTSL 3 BASIC1.83□□□□□ -2.12
CCDC42Q96M95 AC010678.1-201ENST00000614118 713 ntBASIC1.83□□□□□ -2.12
CCDC42Q96M95 AC109809.1-201ENST00000619665 545 ntBASIC1.83□□□□□ -2.12
CCDC42Q96M95 AC103710.2-202ENST00000641454 2853 ntBASIC1.83□□□□□ -2.12
CCDC42Q96M95 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC1.82□□□□□ -2.12
CCDC42Q96M95 RNU6-657P-201ENST00000383904 107 ntBASIC1.82□□□□□ -2.12
CCDC42Q96M95 MIR218-1-201ENST00000384999 110 ntBASIC1.82□□□□□ -2.12
CCDC42Q96M95 MIR888-201ENST00000401186 77 ntBASIC1.82□□□□□ -2.12
CCDC42Q96M95 AC092634.6-201ENST00000418558 192 ntBASIC1.82□□□□□ -2.12
CCDC42Q96M95 PPP1R11P2-201ENST00000423543 382 ntBASIC1.82□□□□□ -2.12
CCDC42Q96M95 AL353612.1-201ENST00000428769 465 ntTSL 3 BASIC1.82□□□□□ -2.12
CCDC42Q96M95 IFNA20P-201ENST00000436840 528 ntBASIC1.82□□□□□ -2.12
CCDC42Q96M95 AC114878.1-201ENST00000441166 358 ntBASIC1.82□□□□□ -2.12
CCDC42Q96M95 AL445465.2-201ENST00000455530 461 ntTSL 2 BASIC1.82□□□□□ -2.12
CCDC42Q96M95 AGBL4-IT1-201ENST00000457061 514 ntTSL 3 BASIC1.82□□□□□ -2.12
CCDC42Q96M95 RPL26P9-201ENST00000457466 433 ntBASIC1.82□□□□□ -2.12
CCDC42Q96M95 AC026801.1-201ENST00000497178 464 ntBASIC1.82□□□□□ -2.12
CCDC42Q96M95 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC1.82□□□□□ -2.12
CCDC42Q96M95 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC1.82□□□□□ -2.12
CCDC42Q96M95 SNORA31.6-201ENST00000516241 130 ntBASIC1.82□□□□□ -2.12
CCDC42Q96M95 AC024224.1-201ENST00000538284 609 ntBASIC1.82□□□□□ -2.12
CCDC42Q96M95 DEFB122-202ENST00000569013 197 ntBASIC1.82□□□□□ -2.12
CCDC42Q96M95 AC078899.2-201ENST00000595282 212 ntBASIC1.82□□□□□ -2.12
CCDC42Q96M95 AC091965.1-202ENST00000607662 397 ntTSL 3 BASIC1.82□□□□□ -2.12
CCDC42Q96M95 FTX_3.1-201ENST00000610451 147 ntBASIC1.82□□□□□ -2.12
CCDC42Q96M95 TEX15-203ENST00000638951 11341 ntAPPRIS P1 TSL 5 BASIC1.82□□□□□ -2.12
CCDC42Q96M95 OR5T1-202ENST00000641665 1471 ntAPPRIS P1 BASIC1.82□□□□□ -2.12
CCDC42Q96M95 NEDD1-204ENST00000457368 3162 ntTSL 2 BASIC1.82□□□□□ -2.12
CCDC42Q96M95 RNU6-839P-201ENST00000363347 108 ntBASIC1.81□□□□□ -2.12
CCDC42Q96M95 RNA5SP363-201ENST00000365072 115 ntBASIC1.81□□□□□ -2.12
CCDC42Q96M95 RNU6-140P-201ENST00000384566 108 ntBASIC1.81□□□□□ -2.12
CCDC42Q96M95 PGBD4P6-201ENST00000421501 610 ntBASIC1.81□□□□□ -2.12
CCDC42Q96M95 AC019178.2-201ENST00000423595 505 ntBASIC1.81□□□□□ -2.12
CCDC42Q96M95 FAM204CP-201ENST00000424489 642 ntBASIC1.81□□□□□ -2.12
CCDC42Q96M95 AC024579.1-201ENST00000503685 371 ntTSL 5 BASIC1.81□□□□□ -2.12
CCDC42Q96M95 AC016556.1-201ENST00000510004 935 ntTSL 2 BASIC1.81□□□□□ -2.12
CCDC42Q96M95 HSPA8P13-201ENST00000523715 472 ntBASIC1.81□□□□□ -2.12
CCDC42Q96M95 AC118273.2-201ENST00000532092 465 ntBASIC1.81□□□□□ -2.12
CCDC42Q96M95 AC092490.2-202ENST00000544922 462 ntTSL 3 BASIC1.81□□□□□ -2.12
CCDC42Q96M95 AC007686.2-201ENST00000554043 469 ntTSL 2 BASIC1.81□□□□□ -2.12
CCDC42Q96M95 CYCSP2-201ENST00000558168 301 ntBASIC1.81□□□□□ -2.12
CCDC42Q96M95 LINC01570-201ENST00000561572 434 ntTSL 3 BASIC1.81□□□□□ -2.12
CCDC42Q96M95 MIR4287-201ENST00000579398 78 ntBASIC1.81□□□□□ -2.12
CCDC42Q96M95 ABBA01006766.1-201ENST00000584728 294 ntBASIC1.81□□□□□ -2.12
CCDC42Q96M95 BNIP3P24-201ENST00000593398 557 ntBASIC1.81□□□□□ -2.12
CCDC42Q96M95 AC007349.4-201ENST00000608114 532 ntBASIC1.81□□□□□ -2.12
Retrieved 100 of 98,524 protein–RNA pairs in 113.5 ms