Protein–RNA interactions for Protein: Q8NHS4

CLHC1, Clathrin heavy chain linker domain-containing protein 1, humanhuman

Predictions only

Length 586 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1Q8NHS4 AC017099.1-201ENST00000448261 1028 ntBASIC2.1□□□□□ -2.07
CLHC1Q8NHS4 SNORD121B-201ENST00000458838 81 ntBASIC2.1□□□□□ -2.07
CLHC1Q8NHS4 RNA5SP233-201ENST00000459153 113 ntBASIC2.1□□□□□ -2.07
CLHC1Q8NHS4 AC080013.2-201ENST00000460866 323 ntBASIC2.1□□□□□ -2.07
CLHC1Q8NHS4 AC090515.1-201ENST00000465295 476 ntBASIC2.1□□□□□ -2.07
CLHC1Q8NHS4 AC055731.1-201ENST00000474387 401 ntBASIC2.1□□□□□ -2.07
CLHC1Q8NHS4 AC074033.2-201ENST00000480669 535 ntTSL 3 BASIC2.1□□□□□ -2.07
CLHC1Q8NHS4 RPS29P20-201ENST00000489592 171 ntBASIC2.1□□□□□ -2.07
CLHC1Q8NHS4 LINC02032-201ENST00000490465 391 ntTSL 2 BASIC2.1□□□□□ -2.07
CLHC1Q8NHS4 MTCYBP16-201ENST00000509187 1129 ntBASIC2.1□□□□□ -2.07
CLHC1Q8NHS4 AC114781.4-201ENST00000513707 639 ntBASIC2.1□□□□□ -2.07
CLHC1Q8NHS4 AC093677.1-201ENST00000514414 678 ntBASIC2.1□□□□□ -2.07
CLHC1Q8NHS4 AC104417.1-201ENST00000523974 751 ntBASIC2.1□□□□□ -2.07
CLHC1Q8NHS4 AP003181.1-201ENST00000528811 445 ntTSL 3 BASIC2.1□□□□□ -2.07
CLHC1Q8NHS4 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC2.1□□□□□ -2.07
CLHC1Q8NHS4 CYB5AP5-201ENST00000549779 389 ntBASIC2.1□□□□□ -2.07
CLHC1Q8NHS4 AL133241.1-201ENST00000556832 487 ntBASIC2.1□□□□□ -2.07
CLHC1Q8NHS4 MIR7515HG-213ENST00000585872 758 ntTSL 5 BASIC2.1□□□□□ -2.07
CLHC1Q8NHS4 AC078899.2-201ENST00000595282 212 ntBASIC2.1□□□□□ -2.07
CLHC1Q8NHS4 AC008121.1-201ENST00000603244 268 ntBASIC2.1□□□□□ -2.07
CLHC1Q8NHS4 THRA1/BTR-203ENST00000604191 571 ntTSL 4 BASIC2.1□□□□□ -2.07
CLHC1Q8NHS4 AL390208.1-201ENST00000605885 644 ntBASIC2.1□□□□□ -2.07
CLHC1Q8NHS4 IGHVIII-44-202ENST00000636235 289 ntBASIC2.1□□□□□ -2.07
CLHC1Q8NHS4 TTK-202ENST00000369798 3010 ntAPPRIS P3 TSL 1 (best) BASIC2.1□□□□□ -2.07
CLHC1Q8NHS4 CEP57L1-203ENST00000368970 1680 ntAPPRIS ALT2 TSL 5 BASIC2.09□□□□□ -2.07
CLHC1Q8NHS4 AC010889.1-201ENST00000566193 2666 ntBASIC2.09□□□□□ -2.07
CLHC1Q8NHS4 MTND4P1-201ENST00000457501 1466 ntBASIC2.09□□□□□ -2.07
CLHC1Q8NHS4 KNL1-204ENST00000527044 5404 ntTSL 5 BASIC2.09□□□□□ -2.07
CLHC1Q8NHS4 RNU5E-8P-201ENST00000363502 116 ntBASIC2.09□□□□□ -2.07
CLHC1Q8NHS4 RNU5B-4P-201ENST00000363508 111 ntBASIC2.09□□□□□ -2.07
CLHC1Q8NHS4 Y_RNA.548-201ENST00000384656 105 ntBASIC2.09□□□□□ -2.07
CLHC1Q8NHS4 RPL7P27-201ENST00000403775 720 ntBASIC2.09□□□□□ -2.07
CLHC1Q8NHS4 RNU2-33P-201ENST00000410344 192 ntBASIC2.09□□□□□ -2.07
CLHC1Q8NHS4 AL139413.1-201ENST00000421309 217 ntBASIC2.09□□□□□ -2.07
CLHC1Q8NHS4 HMGN2P38-201ENST00000423806 265 ntBASIC2.09□□□□□ -2.07
CLHC1Q8NHS4 LINC02095-201ENST00000430908 346 ntTSL 2 BASIC2.09□□□□□ -2.07
CLHC1Q8NHS4 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC2.09□□□□□ -2.07
CLHC1Q8NHS4 AC018693.1-201ENST00000442829 550 ntTSL 4 BASIC2.09□□□□□ -2.07
CLHC1Q8NHS4 OFD1P7Y-201ENST00000454643 1155 ntBASIC2.09□□□□□ -2.07
CLHC1Q8NHS4 RPS20P20-201ENST00000460498 340 ntBASIC2.09□□□□□ -2.07
CLHC1Q8NHS4 CNOT10-AS1-201ENST00000475395 466 ntTSL 3 BASIC2.09□□□□□ -2.07
CLHC1Q8NHS4 LINC02066-201ENST00000492731 580 ntTSL 4 BASIC2.09□□□□□ -2.07
CLHC1Q8NHS4 AC026801.1-201ENST00000497178 464 ntBASIC2.09□□□□□ -2.07
CLHC1Q8NHS4 AC008628.1-201ENST00000508663 265 ntBASIC2.09□□□□□ -2.07
CLHC1Q8NHS4 AC096736.1-201ENST00000512609 947 ntTSL 3 BASIC2.09□□□□□ -2.07
CLHC1Q8NHS4 AC011377.1-201ENST00000517708 275 ntTSL 3 BASIC2.09□□□□□ -2.07
CLHC1Q8NHS4 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC2.09□□□□□ -2.07
CLHC1Q8NHS4 AP002770.2-201ENST00000543613 532 ntBASIC2.09□□□□□ -2.07
CLHC1Q8NHS4 AC007151.1-201ENST00000572774 483 ntBASIC2.09□□□□□ -2.07
CLHC1Q8NHS4 AC091588.1-201ENST00000578504 359 ntTSL 3 BASIC2.09□□□□□ -2.07
CLHC1Q8NHS4 AC008749.1-201ENST00000597650 306 ntBASIC2.09□□□□□ -2.07
CLHC1Q8NHS4 AC011451.2-201ENST00000604303 598 ntBASIC2.09□□□□□ -2.07
CLHC1Q8NHS4 AC069294.1-201ENST00000608397 350 ntBASIC2.09□□□□□ -2.07
CLHC1Q8NHS4 AC107294.1-201ENST00000609524 467 ntBASIC2.09□□□□□ -2.07
CLHC1Q8NHS4 AL589743.7-201ENST00000612637 233 ntBASIC2.09□□□□□ -2.07
CLHC1Q8NHS4 AC013476.2-201ENST00000614456 459 ntBASIC2.09□□□□□ -2.07
CLHC1Q8NHS4 AL590099.1-201ENST00000615276 138 ntBASIC2.09□□□□□ -2.07
CLHC1Q8NHS4 HOTAIRM1_2.1-201ENST00000616712 215 ntBASIC2.09□□□□□ -2.07
CLHC1Q8NHS4 AC009831.4-201ENST00000620744 325 ntBASIC2.09□□□□□ -2.07
CLHC1Q8NHS4 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.08□□□□□ -2.08
CLHC1Q8NHS4 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.08□□□□□ -2.08
CLHC1Q8NHS4 MIR449A-201ENST00000362113 91 ntBASIC2.08□□□□□ -2.08
CLHC1Q8NHS4 AFDN-AS1-202ENST00000417244 182 ntTSL 2 BASIC2.08□□□□□ -2.08
CLHC1Q8NHS4 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC2.08□□□□□ -2.08
CLHC1Q8NHS4 LINC01646-201ENST00000420522 682 ntTSL 3 BASIC2.08□□□□□ -2.08
CLHC1Q8NHS4 PTP4A1P7-201ENST00000423476 514 ntBASIC2.08□□□□□ -2.08
CLHC1Q8NHS4 AC093106.2-201ENST00000428212 385 ntBASIC2.08□□□□□ -2.08
CLHC1Q8NHS4 PTGES3P1-201ENST00000439531 483 ntBASIC2.08□□□□□ -2.08
CLHC1Q8NHS4 MTCYBP42-201ENST00000444653 1130 ntBASIC2.08□□□□□ -2.08
CLHC1Q8NHS4 HIGD1AP2-201ENST00000446367 280 ntBASIC2.08□□□□□ -2.08
CLHC1Q8NHS4 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC2.08□□□□□ -2.08
CLHC1Q8NHS4 AC108733.1-201ENST00000479244 705 ntTSL 3 BASIC2.08□□□□□ -2.08
CLHC1Q8NHS4 AC004263.1-201ENST00000479327 332 ntBASIC2.08□□□□□ -2.08
CLHC1Q8NHS4 LINC01995-201ENST00000489016 621 ntTSL 3 BASIC2.08□□□□□ -2.08
CLHC1Q8NHS4 RPL23AP49-201ENST00000492925 468 ntBASIC2.08□□□□□ -2.08
CLHC1Q8NHS4 AC008837.1-201ENST00000511513 412 ntBASIC2.08□□□□□ -2.08
CLHC1Q8NHS4 LIAS-206ENST00000513731 826 ntTSL 5 BASIC2.08□□□□□ -2.08
CLHC1Q8NHS4 RN7SKP31-201ENST00000516354 278 ntBASIC2.08□□□□□ -2.08
CLHC1Q8NHS4 AC118273.2-201ENST00000532092 465 ntBASIC2.08□□□□□ -2.08
CLHC1Q8NHS4 AL133166.1-201ENST00000551040 1034 ntTSL 4 BASIC2.08□□□□□ -2.08
CLHC1Q8NHS4 CYCSP2-201ENST00000558168 301 ntBASIC2.08□□□□□ -2.08
CLHC1Q8NHS4 AP001172.2-201ENST00000602454 467 ntTSL 5 BASIC2.08□□□□□ -2.08
CLHC1Q8NHS4 AC007938.3-201ENST00000604965 623 ntBASIC2.08□□□□□ -2.08
CLHC1Q8NHS4 AL021368.1-201ENST00000607490 540 ntBASIC2.08□□□□□ -2.08
CLHC1Q8NHS4 AL357080.1-201ENST00000617394 239 ntBASIC2.08□□□□□ -2.08
CLHC1Q8NHS4 AC025034.2-201ENST00000623264 286 ntBASIC2.08□□□□□ -2.08
CLHC1Q8NHS4 SYT14-201ENST00000367015 5094 ntAPPRIS ALT2 TSL 1 (best) BASIC2.08□□□□□ -2.08
CLHC1Q8NHS4 CDR1-202ENST00000625883 1485 ntBASIC2.07□□□□□ -2.08
CLHC1Q8NHS4 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC2.07□□□□□ -2.08
CLHC1Q8NHS4 RNU6-359P-201ENST00000365466 108 ntBASIC2.07□□□□□ -2.08
CLHC1Q8NHS4 RNU1-148P-201ENST00000384472 162 ntBASIC2.07□□□□□ -2.08
CLHC1Q8NHS4 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC2.07□□□□□ -2.08
CLHC1Q8NHS4 BCL2L15-203ENST00000393320 276 ntTSL 1 (best) BASIC2.07□□□□□ -2.08
CLHC1Q8NHS4 MTCO1P56-201ENST00000401674 224 ntBASIC2.07□□□□□ -2.08
CLHC1Q8NHS4 MORN2-203ENST00000409131 544 ntTSL 5 BASIC2.07□□□□□ -2.08
CLHC1Q8NHS4 C1D-204ENST00000410067 736 ntAPPRIS P1 TSL 1 (best) BASIC2.07□□□□□ -2.08
CLHC1Q8NHS4 TPMTP3-201ENST00000411928 735 ntBASIC2.07□□□□□ -2.08
CLHC1Q8NHS4 TPMTP2-201ENST00000414372 726 ntBASIC2.07□□□□□ -2.08
CLHC1Q8NHS4 BTF3P8-201ENST00000414577 526 ntBASIC2.07□□□□□ -2.08
CLHC1Q8NHS4 AC003685.2-201ENST00000422795 395 ntBASIC2.07□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 87.3 ms