Protein–RNA interactions for Protein: Q8N4M1

SLC44A3, Choline transporter-like protein 3, humanhuman

Predictions only

Length 653 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A3Q8N4M1 MIR4293-201ENST00000584305 78 ntBASIC3.96□□□□□ -1.78
SLC44A3Q8N4M1 AC007390.2-201ENST00000606229 3803 ntBASIC3.96□□□□□ -1.78
SLC44A3Q8N4M1 AL627309.6-201ENST00000606857 840 ntBASIC3.96□□□□□ -1.78
SLC44A3Q8N4M1 AL133215.3-201ENST00000609801 448 ntBASIC3.96□□□□□ -1.78
SLC44A3Q8N4M1 MTND4P14-201ENST00000435799 1354 ntBASIC3.96□□□□□ -1.78
SLC44A3Q8N4M1 MTND4P27-201ENST00000450813 1354 ntBASIC3.96□□□□□ -1.78
SLC44A3Q8N4M1 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC3.96□□□□□ -1.78
SLC44A3Q8N4M1 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC3.96□□□□□ -1.78
SLC44A3Q8N4M1 SLITRK4-203ENST00000596188 8545 ntAPPRIS P1 TSL 1 (best) BASIC3.96□□□□□ -1.78
SLC44A3Q8N4M1 MTUS1-216ENST00000519263 4089 ntTSL 2 BASIC3.95□□□□□ -1.78
SLC44A3Q8N4M1 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC3.95□□□□□ -1.78
SLC44A3Q8N4M1 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
SLC44A3Q8N4M1 CRISP3-201ENST00000263045 2170 ntAPPRIS P3 TSL 1 (best) BASIC3.95□□□□□ -1.78
SLC44A3Q8N4M1 MARK2P15-201ENST00000432204 2186 ntBASIC3.95□□□□□ -1.78
SLC44A3Q8N4M1 C6orf10-205ENST00000527965 2076 ntAPPRIS ALT2 TSL 2 BASIC3.95□□□□□ -1.78
SLC44A3Q8N4M1 AL359893.1-201ENST00000447628 1580 ntBASIC3.95□□□□□ -1.78
SLC44A3Q8N4M1 RNA5SP267-201ENST00000364893 126 ntBASIC3.95□□□□□ -1.78
SLC44A3Q8N4M1 AIF1-202ENST00000376049 524 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
SLC44A3Q8N4M1 Y_RNA.414-201ENST00000384011 101 ntBASIC3.95□□□□□ -1.78
SLC44A3Q8N4M1 SNORD51-201ENST00000384320 80 ntBASIC3.95□□□□□ -1.78
SLC44A3Q8N4M1 RNU6-1160P-201ENST00000384546 104 ntBASIC3.95□□□□□ -1.78
SLC44A3Q8N4M1 Y_RNA.530-201ENST00000384587 101 ntBASIC3.95□□□□□ -1.78
SLC44A3Q8N4M1 UBE2V1P2-201ENST00000397758 440 ntBASIC3.95□□□□□ -1.78
SLC44A3Q8N4M1 AL606923.1-201ENST00000406616 190 ntBASIC3.95□□□□□ -1.78
SLC44A3Q8N4M1 SNORA3C-201ENST00000408792 125 ntBASIC3.95□□□□□ -1.78
SLC44A3Q8N4M1 RNU2-39P-201ENST00000410604 198 ntBASIC3.95□□□□□ -1.78
SLC44A3Q8N4M1 GPC5-AS1-201ENST00000419288 393 ntTSL 3 BASIC3.95□□□□□ -1.78
SLC44A3Q8N4M1 Z82205.1-201ENST00000428456 297 ntBASIC3.95□□□□□ -1.78
SLC44A3Q8N4M1 AC083863.1-201ENST00000438811 231 ntBASIC3.95□□□□□ -1.78
SLC44A3Q8N4M1 HMGB3P11-201ENST00000440127 604 ntBASIC3.95□□□□□ -1.78
SLC44A3Q8N4M1 RANP8-201ENST00000444720 713 ntBASIC3.95□□□□□ -1.78
SLC44A3Q8N4M1 RPL21P23-201ENST00000446654 460 ntBASIC3.95□□□□□ -1.78
SLC44A3Q8N4M1 RPS17P13-201ENST00000448974 407 ntBASIC3.95□□□□□ -1.78
SLC44A3Q8N4M1 LINC00571-203ENST00000454060 525 ntTSL 3 BASIC3.95□□□□□ -1.78
SLC44A3Q8N4M1 AL162395.1-201ENST00000457882 422 ntBASIC3.95□□□□□ -1.78
SLC44A3Q8N4M1 VN1R17P-201ENST00000472048 1090 ntBASIC3.95□□□□□ -1.78
SLC44A3Q8N4M1 AC087385.1-201ENST00000475062 312 ntBASIC3.95□□□□□ -1.78
SLC44A3Q8N4M1 S100A11P1-201ENST00000477525 312 ntBASIC3.95□□□□□ -1.78
SLC44A3Q8N4M1 LINC02469-201ENST00000506460 741 ntTSL 3 BASIC3.95□□□□□ -1.78
SLC44A3Q8N4M1 AC131956.2-201ENST00000510922 512 ntTSL 3 BASIC3.95□□□□□ -1.78
SLC44A3Q8N4M1 AC113167.1-201ENST00000512941 570 ntTSL 4 BASIC3.95□□□□□ -1.78
SLC44A3Q8N4M1 RNU6-27P-201ENST00000516146 107 ntBASIC3.95□□□□□ -1.78
SLC44A3Q8N4M1 RNA5SP164-201ENST00000516533 110 ntBASIC3.95□□□□□ -1.78
SLC44A3Q8N4M1 Y_RNA.711-201ENST00000516993 102 ntBASIC3.95□□□□□ -1.78
SLC44A3Q8N4M1 Y_RNA.718-201ENST00000517110 102 ntBASIC3.95□□□□□ -1.78
SLC44A3Q8N4M1 AC124290.1-202ENST00000523342 387 ntTSL 3 BASIC3.95□□□□□ -1.78
SLC44A3Q8N4M1 LINC01479-202ENST00000546170 444 ntTSL 2 BASIC3.95□□□□□ -1.78
SLC44A3Q8N4M1 LINC02286-201ENST00000552425 285 ntTSL 2 BASIC3.95□□□□□ -1.78
SLC44A3Q8N4M1 MIR4716-201ENST00000579628 84 ntBASIC3.95□□□□□ -1.78
SLC44A3Q8N4M1 MIR5583-1-201ENST00000580941 59 ntBASIC3.95□□□□□ -1.78
SLC44A3Q8N4M1 MIR3942-201ENST00000585264 109 ntBASIC3.95□□□□□ -1.78
SLC44A3Q8N4M1 ZEB2-AS1-204ENST00000595109 855 ntTSL 5 BASIC3.95□□□□□ -1.78
SLC44A3Q8N4M1 DPPA3P3-201ENST00000603842 430 ntBASIC3.95□□□□□ -1.78
SLC44A3Q8N4M1 AC124303.1-201ENST00000605703 360 ntBASIC3.95□□□□□ -1.78
SLC44A3Q8N4M1 RNU1-30P-201ENST00000606575 163 ntBASIC3.95□□□□□ -1.78
SLC44A3Q8N4M1 AL355802.3-201ENST00000607571 545 ntBASIC3.95□□□□□ -1.78
SLC44A3Q8N4M1 HTN1-205ENST00000610341 536 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
SLC44A3Q8N4M1 AC011155.2-201ENST00000623202 216 ntBASIC3.95□□□□□ -1.78
SLC44A3Q8N4M1 AC091925.2-201ENST00000625059 256 ntBASIC3.95□□□□□ -1.78
SLC44A3Q8N4M1 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC3.95□□□□□ -1.78
SLC44A3Q8N4M1 SPATA31D2P-201ENST00000429999 4388 ntBASIC3.95□□□□□ -1.78
SLC44A3Q8N4M1 CYLC2-204ENST00000612124 1817 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
SLC44A3Q8N4M1 CCDC14-217ENST00000485727 7917 ntAPPRIS ALT2 TSL 1 (best) BASIC3.95□□□□□ -1.78
SLC44A3Q8N4M1 AC121333.1-201ENST00000567488 2709 ntBASIC3.94□□□□□ -1.78
SLC44A3Q8N4M1 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC3.94□□□□□ -1.78
SLC44A3Q8N4M1 ZNF594-201ENST00000399604 4862 ntAPPRIS P1 BASIC3.94□□□□□ -1.78
SLC44A3Q8N4M1 NR3C1-206ENST00000424646 4591 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
SLC44A3Q8N4M1 OSBPL9P4-201ENST00000371707 1800 ntBASIC3.94□□□□□ -1.78
SLC44A3Q8N4M1 MIR369-201ENST00000362155 70 ntBASIC3.94□□□□□ -1.78
SLC44A3Q8N4M1 RN7SKP44-201ENST00000363602 316 ntBASIC3.94□□□□□ -1.78
SLC44A3Q8N4M1 MDM4-202ENST00000367180 547 ntTSL 3 BASIC3.94□□□□□ -1.78
SLC44A3Q8N4M1 RNU6-1297P-201ENST00000384415 104 ntBASIC3.94□□□□□ -1.78
SLC44A3Q8N4M1 AL136372.1-201ENST00000403060 228 ntBASIC3.94□□□□□ -1.78
SLC44A3Q8N4M1 RPL5P18-201ENST00000406671 891 ntBASIC3.94□□□□□ -1.78
SLC44A3Q8N4M1 RNU2-36P-201ENST00000410361 191 ntBASIC3.94□□□□□ -1.78
SLC44A3Q8N4M1 VN1R36P-201ENST00000414936 291 ntBASIC3.94□□□□□ -1.78
SLC44A3Q8N4M1 AC003092.1-201ENST00000415536 639 ntTSL 3 BASIC3.94□□□□□ -1.78
SLC44A3Q8N4M1 RPS15AP40-201ENST00000419621 391 ntBASIC3.94□□□□□ -1.78
SLC44A3Q8N4M1 AL158156.1-201ENST00000422509 473 ntBASIC3.94□□□□□ -1.78
SLC44A3Q8N4M1 AL138785.1-201ENST00000425821 331 ntBASIC3.94□□□□□ -1.78
SLC44A3Q8N4M1 AL122034.1-201ENST00000427609 497 ntTSL 2 BASIC3.94□□□□□ -1.78
SLC44A3Q8N4M1 AC097713.2-201ENST00000430199 356 ntBASIC3.94□□□□□ -1.78
SLC44A3Q8N4M1 GPM6BP2-201ENST00000432046 144 ntBASIC3.94□□□□□ -1.78
SLC44A3Q8N4M1 ELOCP18-201ENST00000434209 337 ntBASIC3.94□□□□□ -1.78
SLC44A3Q8N4M1 AL137789.1-201ENST00000439443 682 ntTSL 3 BASIC3.94□□□□□ -1.78
SLC44A3Q8N4M1 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC3.94□□□□□ -1.78
SLC44A3Q8N4M1 AC005094.1-201ENST00000440420 368 ntBASIC3.94□□□□□ -1.78
SLC44A3Q8N4M1 GPM6BP1-201ENST00000446387 144 ntBASIC3.94□□□□□ -1.78
SLC44A3Q8N4M1 RPS3AP46-201ENST00000448352 682 ntBASIC3.94□□□□□ -1.78
SLC44A3Q8N4M1 AC005538.1-201ENST00000455991 594 ntTSL 3 BASIC3.94□□□□□ -1.78
SLC44A3Q8N4M1 BX510359.1-201ENST00000456973 237 ntBASIC3.94□□□□□ -1.78
SLC44A3Q8N4M1 RNU6-1208P-201ENST00000459588 107 ntBASIC3.94□□□□□ -1.78
SLC44A3Q8N4M1 PTP4A2-203ENST00000470404 575 ntTSL 3 BASIC3.94□□□□□ -1.78
SLC44A3Q8N4M1 HYDIN2-201ENST00000493714 554 ntTSL 4 BASIC3.94□□□□□ -1.78
SLC44A3Q8N4M1 MRPL36-203ENST00000505818 595 ntAPPRIS P1 TSL 3 BASIC3.94□□□□□ -1.78
SLC44A3Q8N4M1 LINC02118-202ENST00000510583 419 ntTSL 3 BASIC3.94□□□□□ -1.78
SLC44A3Q8N4M1 LIAS-206ENST00000513731 826 ntTSL 5 BASIC3.94□□□□□ -1.78
SLC44A3Q8N4M1 RNU6-1170P-201ENST00000515974 106 ntBASIC3.94□□□□□ -1.78
SLC44A3Q8N4M1 RNU2-10P-201ENST00000516375 211 ntBASIC3.94□□□□□ -1.78
SLC44A3Q8N4M1 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC3.94□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 129.5 ms