Protein–RNA interactions for Protein: Q8N3C7

CLIP4, CAP-Gly domain-containing linker protein 4, humanhuman

Predictions only

Length 705 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4Q8N3C7 AL353748.2-201ENST00000622148 471 ntBASIC3.32□□□□□ -1.88
CLIP4Q8N3C7 TEX41-280ENST00000629185 591 ntTSL 5 BASIC3.32□□□□□ -1.88
CLIP4Q8N3C7 U6.98-201ENST00000637157 84 ntBASIC3.32□□□□□ -1.88
CLIP4Q8N3C7 AL157700.1-201ENST00000561973 1432 ntBASIC3.32□□□□□ -1.88
CLIP4Q8N3C7 MTND5P27-201ENST00000428871 1720 ntBASIC3.32□□□□□ -1.88
CLIP4Q8N3C7 SRP72P2-201ENST00000344851 1979 ntBASIC3.32□□□□□ -1.88
CLIP4Q8N3C7 KIAA1524-206ENST00000491772 3877 ntTSL 1 (best) BASIC3.32□□□□□ -1.88
CLIP4Q8N3C7 ABCA5-208ENST00000588877 6525 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
CLIP4Q8N3C7 PWAR6-201ENST00000552334 4618 ntBASIC3.31□□□□□ -1.88
CLIP4Q8N3C7 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC3.31□□□□□ -1.88
CLIP4Q8N3C7 GPRC6A-201ENST00000310357 2860 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
CLIP4Q8N3C7 SULT1B1-201ENST00000310613 7115 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
CLIP4Q8N3C7 TUG1-202ENST00000521091 2110 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
CLIP4Q8N3C7 KIAA1109-203ENST00000388738 15574 ntAPPRIS P1 TSL 1 (best) BASIC3.31□□□□□ -1.88
CLIP4Q8N3C7 SLC8A1-207ENST00000406785 20987 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
CLIP4Q8N3C7 MIR30E-201ENST00000362104 92 ntBASIC3.31□□□□□ -1.88
CLIP4Q8N3C7 Y_RNA.72-201ENST00000362894 103 ntBASIC3.31□□□□□ -1.88
CLIP4Q8N3C7 RNU6-1155P-201ENST00000363554 107 ntBASIC3.31□□□□□ -1.88
CLIP4Q8N3C7 Y_RNA.157-201ENST00000363638 102 ntBASIC3.31□□□□□ -1.88
CLIP4Q8N3C7 RNA5SP515-201ENST00000364570 118 ntBASIC3.31□□□□□ -1.88
CLIP4Q8N3C7 U8.11-201ENST00000384699 133 ntBASIC3.31□□□□□ -1.88
CLIP4Q8N3C7 U8.12-201ENST00000384701 133 ntBASIC3.31□□□□□ -1.88
CLIP4Q8N3C7 MIR135A2-201ENST00000384854 100 ntBASIC3.31□□□□□ -1.88
CLIP4Q8N3C7 MIR454-201ENST00000390180 115 ntBASIC3.31□□□□□ -1.88
CLIP4Q8N3C7 AL109755.1-201ENST00000401791 649 ntBASIC3.31□□□□□ -1.88
CLIP4Q8N3C7 AL136372.1-201ENST00000403060 228 ntBASIC3.31□□□□□ -1.88
CLIP4Q8N3C7 RNA5SP293-201ENST00000410527 113 ntBASIC3.31□□□□□ -1.88
CLIP4Q8N3C7 RNU6-55P-201ENST00000411092 107 ntBASIC3.31□□□□□ -1.88
CLIP4Q8N3C7 RNU6-954P-201ENST00000411355 107 ntBASIC3.31□□□□□ -1.88
CLIP4Q8N3C7 EI24P1-201ENST00000416584 867 ntBASIC3.31□□□□□ -1.88
CLIP4Q8N3C7 AC005062.1-207ENST00000418442 587 ntTSL 3 BASIC3.31□□□□□ -1.88
CLIP4Q8N3C7 AL137014.1-201ENST00000420490 1226 ntBASIC3.31□□□□□ -1.88
CLIP4Q8N3C7 AF124730.1-201ENST00000430001 327 ntTSL 2 BASIC3.31□□□□□ -1.88
CLIP4Q8N3C7 RPL36AP53-201ENST00000432891 316 ntBASIC3.31□□□□□ -1.88
CLIP4Q8N3C7 AC093019.1-201ENST00000443135 252 ntBASIC3.31□□□□□ -1.88
CLIP4Q8N3C7 U8.18-201ENST00000459285 133 ntBASIC3.31□□□□□ -1.88
CLIP4Q8N3C7 GMFBP1-201ENST00000467831 427 ntBASIC3.31□□□□□ -1.88
CLIP4Q8N3C7 RN7SL132P-201ENST00000478131 296 ntBASIC3.31□□□□□ -1.88
CLIP4Q8N3C7 AP001086.1-201ENST00000494882 321 ntBASIC3.31□□□□□ -1.88
CLIP4Q8N3C7 EIF4EP3-201ENST00000498782 656 ntBASIC3.31□□□□□ -1.88
CLIP4Q8N3C7 LINC01333-201ENST00000508083 724 ntTSL 1 (best) BASIC3.31□□□□□ -1.88
CLIP4Q8N3C7 ZCCHC10-206ENST00000509008 608 ntAPPRIS ALT2 TSL 2 BASIC3.31□□□□□ -1.88
CLIP4Q8N3C7 SNORA31.20-201ENST00000517111 133 ntBASIC3.31□□□□□ -1.88
CLIP4Q8N3C7 AC104232.2-201ENST00000519680 769 ntTSL 5 BASIC3.31□□□□□ -1.88
CLIP4Q8N3C7 AP006245.1-201ENST00000522549 120 ntBASIC3.31□□□□□ -1.88
CLIP4Q8N3C7 SUB1P1-201ENST00000524415 382 ntBASIC3.31□□□□□ -1.88
CLIP4Q8N3C7 OR5B19P-201ENST00000531766 928 ntBASIC3.31□□□□□ -1.88
CLIP4Q8N3C7 OR5BN1P-201ENST00000532955 829 ntBASIC3.31□□□□□ -1.88
CLIP4Q8N3C7 LINC01965-204ENST00000545549 575 ntTSL 4 BASIC3.31□□□□□ -1.88
CLIP4Q8N3C7 AC027288.1-203ENST00000552167 567 ntTSL 4 BASIC3.31□□□□□ -1.88
CLIP4Q8N3C7 AL121603.1-201ENST00000553815 142 ntBASIC3.31□□□□□ -1.88
CLIP4Q8N3C7 AC025043.1-201ENST00000558047 625 ntTSL 2 BASIC3.31□□□□□ -1.88
CLIP4Q8N3C7 AC073878.2-201ENST00000565449 385 ntTSL 3 BASIC3.31□□□□□ -1.88
CLIP4Q8N3C7 FOPNL-205ENST00000573429 646 ntTSL 3 BASIC3.31□□□□□ -1.88
CLIP4Q8N3C7 MIR4293-201ENST00000584305 78 ntBASIC3.31□□□□□ -1.88
CLIP4Q8N3C7 MIR4719-201ENST00000585233 84 ntBASIC3.31□□□□□ -1.88
CLIP4Q8N3C7 AC010525.2-201ENST00000590920 195 ntBASIC3.31□□□□□ -1.88
CLIP4Q8N3C7 AC012313.1-202ENST00000597309 423 ntTSL 3 BASIC3.31□□□□□ -1.88
CLIP4Q8N3C7 AC068724.3-201ENST00000625906 87 ntBASIC3.31□□□□□ -1.88
CLIP4Q8N3C7 LINC01002-206ENST00000631772 539 ntTSL 4 BASIC3.31□□□□□ -1.88
CLIP4Q8N3C7 AC100810.6-201ENST00000638068 285 ntBASIC3.31□□□□□ -1.88
CLIP4Q8N3C7 AC119674.1-207ENST00000641355 633 ntBASIC3.31□□□□□ -1.88
CLIP4Q8N3C7 AC007496.3-201ENST00000624987 3443 ntBASIC3.31□□□□□ -1.88
CLIP4Q8N3C7 USP8P1-201ENST00000494673 3183 ntBASIC3.3□□□□□ -1.88
CLIP4Q8N3C7 AL353746.1-201ENST00000566293 6881 ntBASIC3.3□□□□□ -1.88
CLIP4Q8N3C7 ZNF99-202ENST00000596209 7817 ntTSL 5 BASIC3.3□□□□□ -1.88
CLIP4Q8N3C7 UBA5-201ENST00000264991 2850 ntTSL 5 BASIC3.3□□□□□ -1.88
CLIP4Q8N3C7 UBE2W-203ENST00000517608 8426 ntTSL 1 (best) BASIC3.3□□□□□ -1.88
CLIP4Q8N3C7 CNTN6-201ENST00000350110 3814 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
CLIP4Q8N3C7 KNTC1-205ENST00000450485 3655 ntTSL 2 BASIC3.3□□□□□ -1.88
CLIP4Q8N3C7 CCDC30-212ENST00000507855 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
CLIP4Q8N3C7 CCDC146-201ENST00000285871 3333 ntAPPRIS P2 TSL 1 (best) BASIC3.3□□□□□ -1.88
CLIP4Q8N3C7 AC068647.1-201ENST00000489539 2265 ntBASIC3.3□□□□□ -1.88
CLIP4Q8N3C7 AC073343.1-201ENST00000328239 651 ntBASIC3.3□□□□□ -1.88
CLIP4Q8N3C7 Y_RNA.11-201ENST00000362375 109 ntBASIC3.3□□□□□ -1.88
CLIP4Q8N3C7 SNORA62.1-201ENST00000364287 154 ntBASIC3.3□□□□□ -1.88
CLIP4Q8N3C7 RNU5E-6P-201ENST00000365574 115 ntBASIC3.3□□□□□ -1.88
CLIP4Q8N3C7 BTLA-202ENST00000383680 726 ntAPPRIS ALT2 TSL 1 (best) BASIC3.3□□□□□ -1.88
CLIP4Q8N3C7 SNORD3H-201ENST00000384486 214 ntBASIC3.3□□□□□ -1.88
CLIP4Q8N3C7 RNU6-332P-201ENST00000391193 108 ntBASIC3.3□□□□□ -1.88
CLIP4Q8N3C7 OPRPN-201ENST00000399575 1040 ntAPPRIS P1 TSL 1 (best) BASIC3.3□□□□□ -1.88
CLIP4Q8N3C7 RNU4-65P-201ENST00000410473 140 ntBASIC3.3□□□□□ -1.88
CLIP4Q8N3C7 RPL21P24-201ENST00000413752 448 ntBASIC3.3□□□□□ -1.88
CLIP4Q8N3C7 GRM7-AS1-201ENST00000420230 430 ntTSL 3 BASIC3.3□□□□□ -1.88
CLIP4Q8N3C7 AC099677.1-201ENST00000420575 175 ntBASIC3.3□□□□□ -1.88
CLIP4Q8N3C7 AL022396.1-201ENST00000427011 386 ntTSL 3 BASIC3.3□□□□□ -1.88
CLIP4Q8N3C7 RPL7P2-201ENST00000427639 268 ntBASIC3.3□□□□□ -1.88
CLIP4Q8N3C7 AC018643.1-201ENST00000445459 414 ntTSL 5 BASIC3.3□□□□□ -1.88
CLIP4Q8N3C7 CBWD4P-201ENST00000445695 655 ntBASIC3.3□□□□□ -1.88
CLIP4Q8N3C7 AC125238.1-201ENST00000448842 249 ntBASIC3.3□□□□□ -1.88
CLIP4Q8N3C7 AC073415.1-201ENST00000449240 153 ntBASIC3.3□□□□□ -1.88
CLIP4Q8N3C7 LINC01005-202ENST00000451440 531 ntTSL 4 BASIC3.3□□□□□ -1.88
CLIP4Q8N3C7 AMD1P1-201ENST00000457220 922 ntBASIC3.3□□□□□ -1.88
CLIP4Q8N3C7 RPS4XP2-201ENST00000458402 793 ntBASIC3.3□□□□□ -1.88
CLIP4Q8N3C7 RNU7-182P-201ENST00000459009 62 ntBASIC3.3□□□□□ -1.88
CLIP4Q8N3C7 SIDT1-AS1-201ENST00000462180 465 ntTSL 3 BASIC3.3□□□□□ -1.88
CLIP4Q8N3C7 AC092185.1-201ENST00000491371 97 ntBASIC3.3□□□□□ -1.88
CLIP4Q8N3C7 AC114741.1-201ENST00000504357 464 ntTSL 2 BASIC3.3□□□□□ -1.88
CLIP4Q8N3C7 AC100773.1-201ENST00000505409 520 ntTSL 5 BASIC3.3□□□□□ -1.88
CLIP4Q8N3C7 MTND3P22-201ENST00000510932 243 ntBASIC3.3□□□□□ -1.88
Retrieved 100 of 98,524 protein–RNA pairs in 87.1 ms