Protein–RNA interactions for Protein: Q8IXQ3

C9orf40, Uncharacterized protein C9orf40, humanhuman

Predictions only

Length 194 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf40Q8IXQ3 THOC2-201ENST00000245838 5609 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
C9orf40Q8IXQ3 APC-201ENST00000257430 10701 ntAPPRIS P1 TSL 5 BASIC2.55□□□□□ -2
C9orf40Q8IXQ3 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC2.55□□□□□ -2
C9orf40Q8IXQ3 OR52E6-201ENST00000329322 970 ntAPPRIS P1 BASIC2.55□□□□□ -2
C9orf40Q8IXQ3 MIR26A1-201ENST00000362205 77 ntBASIC2.55□□□□□ -2
C9orf40Q8IXQ3 TMEM59-205ENST00000371348 1911 ntTSL 1 (best) BASIC2.55□□□□□ -2
C9orf40Q8IXQ3 RFPL3S-202ENST00000382086 455 ntAPPRIS ALT2 TSL 2 BASIC2.55□□□□□ -2
C9orf40Q8IXQ3 TRAJ31-201ENST00000390506 57 ntAPPRIS P1 BASIC2.55□□□□□ -2
C9orf40Q8IXQ3 RNU6-278P-201ENST00000390945 109 ntBASIC2.55□□□□□ -2
C9orf40Q8IXQ3 RNA5SP38-201ENST00000410750 119 ntBASIC2.55□□□□□ -2
C9orf40Q8IXQ3 RN7SKP140-201ENST00000411196 284 ntBASIC2.55□□□□□ -2
C9orf40Q8IXQ3 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC2.55□□□□□ -2
C9orf40Q8IXQ3 AC104332.2-201ENST00000429959 156 ntBASIC2.55□□□□□ -2
C9orf40Q8IXQ3 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC2.55□□□□□ -2
C9orf40Q8IXQ3 AL731563.2-201ENST00000431293 291 ntTSL 5 BASIC2.55□□□□□ -2
C9orf40Q8IXQ3 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC2.55□□□□□ -2
C9orf40Q8IXQ3 U91324.1-201ENST00000442864 447 ntTSL 5 BASIC2.55□□□□□ -2
C9orf40Q8IXQ3 KCNQ5-IT1-201ENST00000445310 563 ntTSL 2 BASIC2.55□□□□□ -2
C9orf40Q8IXQ3 AL590365.1-201ENST00000450788 243 ntBASIC2.55□□□□□ -2
C9orf40Q8IXQ3 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC2.55□□□□□ -2
C9orf40Q8IXQ3 AC234781.5-202ENST00000453508 426 ntTSL 3 BASIC2.55□□□□□ -2
C9orf40Q8IXQ3 AC108059.3-201ENST00000456388 214 ntBASIC2.55□□□□□ -2
C9orf40Q8IXQ3 AL390961.3-201ENST00000458171 485 ntTSL 5 BASIC2.55□□□□□ -2
C9orf40Q8IXQ3 CADM2-AS1-201ENST00000476021 2656 ntTSL 1 (best) BASIC2.55□□□□□ -2
C9orf40Q8IXQ3 AP000797.1-201ENST00000478870 387 ntBASIC2.55□□□□□ -2
C9orf40Q8IXQ3 BET1P1-201ENST00000482276 359 ntBASIC2.55□□□□□ -2
C9orf40Q8IXQ3 AC109486.1-201ENST00000486833 374 ntBASIC2.55□□□□□ -2
C9orf40Q8IXQ3 AC112204.1-201ENST00000502591 103 ntBASIC2.55□□□□□ -2
C9orf40Q8IXQ3 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC2.55□□□□□ -2
C9orf40Q8IXQ3 RNU6-390P-201ENST00000516259 103 ntBASIC2.55□□□□□ -2
C9orf40Q8IXQ3 STAU2-225ENST00000523558 1603 ntTSL 2 BASIC2.55□□□□□ -2
C9orf40Q8IXQ3 DEFB108A-201ENST00000530110 222 ntBASIC2.55□□□□□ -2
C9orf40Q8IXQ3 AC123904.3-201ENST00000547218 814 ntBASIC2.55□□□□□ -2
C9orf40Q8IXQ3 AC123904.2-201ENST00000548059 300 ntBASIC2.55□□□□□ -2
C9orf40Q8IXQ3 MIR5697-201ENST00000578045 78 ntBASIC2.55□□□□□ -2
C9orf40Q8IXQ3 AC138761.3-201ENST00000579993 334 ntBASIC2.55□□□□□ -2
C9orf40Q8IXQ3 AC087749.2-201ENST00000583910 352 ntTSL 5 BASIC2.55□□□□□ -2
C9orf40Q8IXQ3 AP001981.2-201ENST00000603241 418 ntBASIC2.55□□□□□ -2
C9orf40Q8IXQ3 AC103710.1-201ENST00000610003 901 ntBASIC2.55□□□□□ -2
C9orf40Q8IXQ3 AC090970.3-201ENST00000612566 866 ntBASIC2.55□□□□□ -2
C9orf40Q8IXQ3 AC068506.1-202ENST00000613388 545 ntTSL 3 BASIC2.55□□□□□ -2
C9orf40Q8IXQ3 TFG-209ENST00000615993 1244 ntTSL 1 (best) BASIC2.55□□□□□ -2
C9orf40Q8IXQ3 AC009159.1-201ENST00000618386 642 ntBASIC2.55□□□□□ -2
C9orf40Q8IXQ3 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC2.55□□□□□ -2
C9orf40Q8IXQ3 NDUFAF4-201ENST00000316149 2399 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
C9orf40Q8IXQ3 ZMYM1-201ENST00000359858 4175 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
C9orf40Q8IXQ3 ANKRD20A17P-201ENST00000511745 1330 ntBASIC2.54□□□□□ -2
C9orf40Q8IXQ3 HSFY1-202ENST00000309834 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.54□□□□□ -2
C9orf40Q8IXQ3 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC2.54□□□□□ -2
C9orf40Q8IXQ3 HSFY2-202ENST00000344884 1038 ntAPPRIS ALT2 TSL 1 (best) BASIC2.54□□□□□ -2
C9orf40Q8IXQ3 AL590004.2-201ENST00000404787 371 ntBASIC2.54□□□□□ -2
C9orf40Q8IXQ3 RNA5SP21-201ENST00000410917 96 ntBASIC2.54□□□□□ -2
C9orf40Q8IXQ3 AL078645.1-201ENST00000414377 423 ntTSL 3 BASIC2.54□□□□□ -2
C9orf40Q8IXQ3 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC2.54□□□□□ -2
C9orf40Q8IXQ3 AC017074.1-201ENST00000424612 561 ntTSL 3 BASIC2.54□□□□□ -2
C9orf40Q8IXQ3 AL353777.1-201ENST00000425552 326 ntBASIC2.54□□□□□ -2
C9orf40Q8IXQ3 AL162414.1-201ENST00000426204 744 ntTSL 3 BASIC2.54□□□□□ -2
C9orf40Q8IXQ3 TIMM9P1-201ENST00000436122 256 ntBASIC2.54□□□□□ -2
C9orf40Q8IXQ3 MACC1-AS1-201ENST00000439285 639 ntTSL 3 BASIC2.54□□□□□ -2
C9orf40Q8IXQ3 AC005094.1-201ENST00000440420 368 ntBASIC2.54□□□□□ -2
C9orf40Q8IXQ3 AL078581.2-201ENST00000446392 378 ntTSL 3 BASIC2.54□□□□□ -2
C9orf40Q8IXQ3 RPL21P8-201ENST00000465083 535 ntBASIC2.54□□□□□ -2
C9orf40Q8IXQ3 CFAP44-AS1-201ENST00000473329 396 ntTSL 2 BASIC2.54□□□□□ -2
C9orf40Q8IXQ3 AC010631.1-201ENST00000474150 156 ntBASIC2.54□□□□□ -2
C9orf40Q8IXQ3 MTND3P7-201ENST00000474435 343 ntBASIC2.54□□□□□ -2
C9orf40Q8IXQ3 PTPRG-AS1-210ENST00000498655 547 ntTSL 4 BASIC2.54□□□□□ -2
C9orf40Q8IXQ3 EPGN-208ENST00000509145 222 ntTSL 1 (best) BASIC2.54□□□□□ -2
C9orf40Q8IXQ3 AC006445.2-201ENST00000510061 472 ntBASIC2.54□□□□□ -2
C9orf40Q8IXQ3 PCAT4-202ENST00000514836 373 ntTSL 3 BASIC2.54□□□□□ -2
C9orf40Q8IXQ3 RNA5SP356-201ENST00000515972 94 ntBASIC2.54□□□□□ -2
C9orf40Q8IXQ3 RNU6-64P-201ENST00000517119 105 ntBASIC2.54□□□□□ -2
C9orf40Q8IXQ3 RNU6-711P-201ENST00000517255 106 ntBASIC2.54□□□□□ -2
C9orf40Q8IXQ3 NRON-201ENST00000517270 370 ntBASIC2.54□□□□□ -2
C9orf40Q8IXQ3 SNHG6-202ENST00000520619 479 ntTSL 3 BASIC2.54□□□□□ -2
C9orf40Q8IXQ3 MTCO1P47-201ENST00000523889 1271 ntBASIC2.54□□□□□ -2
C9orf40Q8IXQ3 LINC02300-201ENST00000549742 665 ntTSL 4 BASIC2.54□□□□□ -2
C9orf40Q8IXQ3 ZNF519P3-201ENST00000557158 1032 ntBASIC2.54□□□□□ -2
C9orf40Q8IXQ3 MIR3605-201ENST00000583214 100 ntBASIC2.54□□□□□ -2
C9orf40Q8IXQ3 AC007001.1-201ENST00000590912 670 ntTSL 5 BASIC2.54□□□□□ -2
C9orf40Q8IXQ3 AC023043.3-201ENST00000593113 385 ntBASIC2.54□□□□□ -2
C9orf40Q8IXQ3 AC080078.1-201ENST00000603643 410 ntTSL 3 BASIC2.54□□□□□ -2
C9orf40Q8IXQ3 AC025811.1-201ENST00000604312 472 ntBASIC2.54□□□□□ -2
C9orf40Q8IXQ3 HSPE1P7-201ENST00000604681 321 ntBASIC2.54□□□□□ -2
C9orf40Q8IXQ3 AC007619.2-201ENST00000605743 379 ntBASIC2.54□□□□□ -2
C9orf40Q8IXQ3 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC2.54□□□□□ -2
C9orf40Q8IXQ3 AL031775.1-201ENST00000607014 887 ntBASIC2.54□□□□□ -2
C9orf40Q8IXQ3 AC005046.1-201ENST00000608515 625 ntBASIC2.54□□□□□ -2
C9orf40Q8IXQ3 AL391813.2-201ENST00000609113 322 ntBASIC2.54□□□□□ -2
C9orf40Q8IXQ3 AC012360.2-201ENST00000609349 391 ntBASIC2.54□□□□□ -2
C9orf40Q8IXQ3 AC108747.1-201ENST00000609508 535 ntBASIC2.54□□□□□ -2
C9orf40Q8IXQ3 AC104010.1-201ENST00000616889 150 ntBASIC2.54□□□□□ -2
C9orf40Q8IXQ3 AC105265.4-201ENST00000618391 306 ntTSL 5 BASIC2.54□□□□□ -2
C9orf40Q8IXQ3 AL136313.1-201ENST00000624804 202 ntBASIC2.54□□□□□ -2
C9orf40Q8IXQ3 LINC01002-215ENST00000632203 314 ntTSL 5 BASIC2.54□□□□□ -2
C9orf40Q8IXQ3 AC010149.2-201ENST00000637608 315 ntBASIC2.54□□□□□ -2
C9orf40Q8IXQ3 PAPPA-AS1-201ENST00000445861 2450 ntBASIC2.54□□□□□ -2
C9orf40Q8IXQ3 SLC27A2-203ENST00000544960 2025 ntTSL 2 BASIC2.54□□□□□ -2
C9orf40Q8IXQ3 PIK3C2G-202ENST00000433979 4840 ntAPPRIS P1 TSL 5 BASIC2.54□□□□□ -2
C9orf40Q8IXQ3 ZNF66-201ENST00000344519 1745 ntAPPRIS P1 TSL 3 BASIC2.54□□□□□ -2
C9orf40Q8IXQ3 RNF219-AS1-214ENST00000607862 6001 ntTSL 1 (best) BASIC2.54□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 117.6 ms