Protein–RNA interactions for Protein: Q8IVW4

CDKL3, Cyclin-dependent kinase-like 3, humanhuman

Predicted RBP Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3Q8IVW4 AC116312.1-201ENST00000606841 314 ntBASIC2.29□□□□□ -2.04
CDKL3Q8IVW4 AC131235.4-201ENST00000609288 620 ntBASIC2.29□□□□□ -2.04
CDKL3Q8IVW4 OR10AB1P-201ENST00000609613 938 ntBASIC2.29□□□□□ -2.04
CDKL3Q8IVW4 AC013562.2-201ENST00000611632 603 ntBASIC2.29□□□□□ -2.04
CDKL3Q8IVW4 AL590099.1-201ENST00000615276 138 ntBASIC2.29□□□□□ -2.04
CDKL3Q8IVW4 MIR4509-1-201ENST00000618224 94 ntBASIC2.29□□□□□ -2.04
CDKL3Q8IVW4 AC009831.4-201ENST00000620744 325 ntBASIC2.29□□□□□ -2.04
CDKL3Q8IVW4 GMFB-210ENST00000628554 639 ntTSL 4 BASIC2.29□□□□□ -2.04
CDKL3Q8IVW4 AC243829.7-201ENST00000633081 225 ntBASIC2.29□□□□□ -2.04
CDKL3Q8IVW4 MIR4275-201ENST00000636486 87 ntBASIC2.29□□□□□ -2.04
CDKL3Q8IVW4 AP003399.1-201ENST00000637534 361 ntBASIC2.29□□□□□ -2.04
CDKL3Q8IVW4 VPS54-202ENST00000354504 3594 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
CDKL3Q8IVW4 AC003984.1-201ENST00000450977 4104 ntTSL 1 (best) BASIC2.29□□□□□ -2.04
CDKL3Q8IVW4 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC2.29□□□□□ -2.04
CDKL3Q8IVW4 SNX16-212ENST00000615066 1918 ntTSL 5 BASIC2.29□□□□□ -2.04
CDKL3Q8IVW4 OR2L2-202ENST00000641771 4300 ntAPPRIS P1 BASIC2.28□□□□□ -2.04
CDKL3Q8IVW4 LINC00836-202ENST00000626230 1640 ntTSL 2 BASIC2.28□□□□□ -2.04
CDKL3Q8IVW4 AL390862.1-201ENST00000635467 1469 ntBASIC2.28□□□□□ -2.04
CDKL3Q8IVW4 AL596028.1-201ENST00000326971 197 ntBASIC2.28□□□□□ -2.04
CDKL3Q8IVW4 OR6C76-201ENST00000328314 939 ntAPPRIS P1 BASIC2.28□□□□□ -2.04
CDKL3Q8IVW4 SNORD116.1-201ENST00000365628 92 ntBASIC2.28□□□□□ -2.04
CDKL3Q8IVW4 EQTN-201ENST00000380031 725 ntAPPRIS ALT2 TSL 1 (best) BASIC2.28□□□□□ -2.04
CDKL3Q8IVW4 SNORA67.4-201ENST00000384688 142 ntBASIC2.28□□□□□ -2.04
CDKL3Q8IVW4 RPL23AP29-201ENST00000397284 453 ntBASIC2.28□□□□□ -2.04
CDKL3Q8IVW4 AL161909.2-201ENST00000417577 409 ntTSL 5 BASIC2.28□□□□□ -2.04
CDKL3Q8IVW4 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC2.28□□□□□ -2.04
CDKL3Q8IVW4 IPO7P1-201ENST00000442031 636 ntBASIC2.28□□□□□ -2.04
CDKL3Q8IVW4 AL031313.1-201ENST00000448435 256 ntBASIC2.28□□□□□ -2.04
CDKL3Q8IVW4 AL163192.1-201ENST00000448858 708 ntTSL 5 BASIC2.28□□□□□ -2.04
CDKL3Q8IVW4 ZNF886P-201ENST00000450781 723 ntBASIC2.28□□□□□ -2.04
CDKL3Q8IVW4 ZNF736P4Y-201ENST00000454995 1243 ntBASIC2.28□□□□□ -2.04
CDKL3Q8IVW4 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC2.28□□□□□ -2.04
CDKL3Q8IVW4 FSBP-201ENST00000481490 1158 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
CDKL3Q8IVW4 SUB1-211ENST00000512913 684 ntAPPRIS P1 TSL 2 BASIC2.28□□□□□ -2.04
CDKL3Q8IVW4 AC010280.1-201ENST00000515199 340 ntTSL 2 BASIC2.28□□□□□ -2.04
CDKL3Q8IVW4 RNU6-150P-201ENST00000516237 95 ntBASIC2.28□□□□□ -2.04
CDKL3Q8IVW4 RNU6-1256P-201ENST00000516539 103 ntBASIC2.28□□□□□ -2.04
CDKL3Q8IVW4 AC092745.2-201ENST00000537764 620 ntTSL 3 BASIC2.28□□□□□ -2.04
CDKL3Q8IVW4 AC107958.2-201ENST00000555396 592 ntTSL 3 BASIC2.28□□□□□ -2.04
CDKL3Q8IVW4 AC009097.3-201ENST00000563557 1018 ntBASIC2.28□□□□□ -2.04
CDKL3Q8IVW4 AC023813.2-201ENST00000564321 469 ntBASIC2.28□□□□□ -2.04
CDKL3Q8IVW4 AGGF1P5-201ENST00000567900 919 ntBASIC2.28□□□□□ -2.04
CDKL3Q8IVW4 OR4K7P-201ENST00000580232 945 ntBASIC2.28□□□□□ -2.04
CDKL3Q8IVW4 AC044873.1-201ENST00000580487 399 ntTSL 3 BASIC2.28□□□□□ -2.04
CDKL3Q8IVW4 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC2.28□□□□□ -2.04
CDKL3Q8IVW4 MIR3945-201ENST00000581853 98 ntBASIC2.28□□□□□ -2.04
CDKL3Q8IVW4 MIR4435-1-201ENST00000582552 80 ntBASIC2.28□□□□□ -2.04
CDKL3Q8IVW4 AP001269.3-201ENST00000588718 329 ntBASIC2.28□□□□□ -2.04
CDKL3Q8IVW4 BBIP1P1-201ENST00000602999 279 ntBASIC2.28□□□□□ -2.04
CDKL3Q8IVW4 AL355877.2-201ENST00000603670 358 ntBASIC2.28□□□□□ -2.04
CDKL3Q8IVW4 AC007938.3-201ENST00000604965 623 ntBASIC2.28□□□□□ -2.04
CDKL3Q8IVW4 AC107294.1-201ENST00000609524 467 ntBASIC2.28□□□□□ -2.04
CDKL3Q8IVW4 AL157392.4-201ENST00000609756 345 ntBASIC2.28□□□□□ -2.04
CDKL3Q8IVW4 AL391834.2-201ENST00000609982 546 ntBASIC2.28□□□□□ -2.04
CDKL3Q8IVW4 AC107075.1-201ENST00000613695 314 ntBASIC2.28□□□□□ -2.04
CDKL3Q8IVW4 AL357080.1-201ENST00000617394 239 ntBASIC2.28□□□□□ -2.04
CDKL3Q8IVW4 AC109809.1-201ENST00000619665 545 ntBASIC2.28□□□□□ -2.04
CDKL3Q8IVW4 AC022306.3-201ENST00000619930 550 ntBASIC2.28□□□□□ -2.04
CDKL3Q8IVW4 AL445264.1-201ENST00000621719 171 ntBASIC2.28□□□□□ -2.04
CDKL3Q8IVW4 MIR6132-201ENST00000622083 109 ntBASIC2.28□□□□□ -2.04
CDKL3Q8IVW4 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC2.28□□□□□ -2.04
CDKL3Q8IVW4 AC012640.5-201ENST00000623897 319 ntBASIC2.28□□□□□ -2.04
CDKL3Q8IVW4 AC010608.3-201ENST00000625048 527 ntBASIC2.28□□□□□ -2.04
CDKL3Q8IVW4 UGP2-231ENST00000627474 264 ntTSL 5 BASIC2.28□□□□□ -2.04
CDKL3Q8IVW4 AC116618.1-201ENST00000634617 774 ntBASIC2.28□□□□□ -2.04
CDKL3Q8IVW4 AL121759.2-201ENST00000636173 570 ntTSL 4 BASIC2.28□□□□□ -2.04
CDKL3Q8IVW4 MIR7515-201ENST00000637837 67 ntBASIC2.28□□□□□ -2.04
CDKL3Q8IVW4 ZNF720P1-201ENST00000562403 1939 ntBASIC2.28□□□□□ -2.04
CDKL3Q8IVW4 AC007785.2-201ENST00000598627 1916 ntBASIC2.28□□□□□ -2.04
CDKL3Q8IVW4 SCOC-202ENST00000394201 1795 ntAPPRIS ALT1 TSL 1 (best) BASIC2.28□□□□□ -2.04
CDKL3Q8IVW4 AL136537.2-201ENST00000562049 2471 ntTSL 1 (best) BASIC2.28□□□□□ -2.04
CDKL3Q8IVW4 USP53-202ENST00000450251 6072 ntAPPRIS P1 TSL 5 BASIC2.28□□□□□ -2.05
CDKL3Q8IVW4 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC2.27□□□□□ -2.05
CDKL3Q8IVW4 Y_RNA.234-201ENST00000364409 97 ntBASIC2.27□□□□□ -2.05
CDKL3Q8IVW4 RNU6-621P-201ENST00000364752 109 ntBASIC2.27□□□□□ -2.05
CDKL3Q8IVW4 Y_RNA.311-201ENST00000365068 96 ntBASIC2.27□□□□□ -2.05
CDKL3Q8IVW4 MIR221-201ENST00000385135 110 ntBASIC2.27□□□□□ -2.05
CDKL3Q8IVW4 MIR325-201ENST00000385260 98 ntBASIC2.27□□□□□ -2.05
CDKL3Q8IVW4 RN7SKP284-201ENST00000411002 343 ntBASIC2.27□□□□□ -2.05
CDKL3Q8IVW4 SEPT2P1-201ENST00000419651 180 ntBASIC2.27□□□□□ -2.05
CDKL3Q8IVW4 AC099548.1-201ENST00000421443 426 ntBASIC2.27□□□□□ -2.05
CDKL3Q8IVW4 RPL32P28-201ENST00000443577 397 ntBASIC2.27□□□□□ -2.05
CDKL3Q8IVW4 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC2.27□□□□□ -2.05
CDKL3Q8IVW4 AC092155.2-201ENST00000454675 477 ntBASIC2.27□□□□□ -2.05
CDKL3Q8IVW4 snoU13.8-201ENST00000458890 104 ntBASIC2.27□□□□□ -2.05
CDKL3Q8IVW4 AC104435.1-201ENST00000483483 166 ntBASIC2.27□□□□□ -2.05
CDKL3Q8IVW4 AL049874.1-201ENST00000489560 388 ntBASIC2.27□□□□□ -2.05
CDKL3Q8IVW4 AC079395.1-201ENST00000510981 262 ntBASIC2.27□□□□□ -2.05
CDKL3Q8IVW4 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC2.27□□□□□ -2.05
CDKL3Q8IVW4 RNU6-528P-201ENST00000516926 100 ntBASIC2.27□□□□□ -2.05
CDKL3Q8IVW4 AC090857.2-201ENST00000526362 723 ntTSL 2 BASIC2.27□□□□□ -2.05
CDKL3Q8IVW4 DEFB131D-201ENST00000526803 184 ntBASIC2.27□□□□□ -2.05
CDKL3Q8IVW4 CYCSP2-201ENST00000558168 301 ntBASIC2.27□□□□□ -2.05
CDKL3Q8IVW4 AC131274.4-201ENST00000577879 398 ntTSL 3 BASIC2.27□□□□□ -2.05
CDKL3Q8IVW4 ZNF788-206ENST00000596883 692 ntTSL 3 BASIC2.27□□□□□ -2.05
CDKL3Q8IVW4 AP001429.1-201ENST00000602568 530 ntBASIC2.27□□□□□ -2.05
CDKL3Q8IVW4 AC004987.4-201ENST00000603383 338 ntBASIC2.27□□□□□ -2.05
CDKL3Q8IVW4 AL139022.2-201ENST00000606934 443 ntBASIC2.27□□□□□ -2.05
CDKL3Q8IVW4 AC004067.1-201ENST00000608733 700 ntBASIC2.27□□□□□ -2.05
CDKL3Q8IVW4 AC103710.4-201ENST00000609301 899 ntBASIC2.27□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 96.3 ms